Array 1 15391-17788 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNTG010000013.1 Lactobacillus delbrueckii subsp. lactis strain NCIMB 702467 NCIMB702467-i1-1_scf13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================================================================================================================================== ================== 15391 36 97.2 30 ...................................T GTAAATCGCGCCAAACGCACCCATTTTTCA 15457 36 97.2 30 ...................................T CTTAGAATTAGGCAATGATTACGTCTATTC 15523 36 97.2 30 ...................................T TTTTGCCATCACTCTTCCAGTGCTGGTATA 15589 36 97.2 30 ...................................T AGTGTCATGATCAGCTCAGAGAGGCCGCTG 15655 36 97.2 29 ...................................T TATGGCGTATGCTTCAGCGAACAAGCGAC 15720 36 100.0 30 .................................... CCAGCTTGGCCTGCTCTTGCTTGGCTTGTG 15786 36 100.0 30 .................................... TTGAAAAATGTAACATTGCCAACGGGATCA 15852 36 100.0 30 .................................... TGCGATTCACTAACCAGAGTTGGGCAAGCA 15918 36 100.0 30 .................................... TGCTCGATTAGTTTCCGCTCCTGGCCGTTT 15984 36 100.0 30 .................................... AACCCAGGTCGAAAATCACCGGACCATCTA 16050 36 100.0 30 .................................... AGGCCTGGACTTCAAAAAGGTCTTCCCGTT 16116 36 100.0 30 .................................... AACCAGGTCGACTCTTTCGCGGATTTTGTT 16182 36 100.0 30 .................................... CAGAGATCATCATGTTTCCTCTTCTGAGCG 16248 36 100.0 30 .................................... ACTTGCATGGGTTAAAGGCCTGTAAGGGGC 16314 36 100.0 30 .................................... GCCAAGATGGACTCAATCGTTTCTGGTGTT 16380 36 100.0 30 .................................... AGAAGAAGCGCTGTACGCTTTATCCGAGAT 16446 36 100.0 30 .................................... GAAGGTGCTTGAGGAGACACCAAGATGACC 16512 36 100.0 31 .................................... CCCGATCCGCTTTAATTCTCCGTTTAAGATA 16579 36 100.0 30 .................................... CTAAGGAAATTGTGCAAAGTGGTATCGTTG 16645 36 100.0 30 .................................... CGTTGTGGGACCACGATCGTGCCGTAATGG 16711 36 100.0 30 .................................... CGGCCAGCCCTGAAGCGAGCAGAGTTTCGC 16777 36 100.0 30 .................................... CAGAATTAAATCCTTATTTCATCTATAACG 16843 36 100.0 30 .................................... GATCCCGTCGTAGTAGTTGACAACATCTTG 16909 36 100.0 30 .................................... CTGAGTTTTGATCTTGCCGTCCTGGACGTT 16975 36 100.0 30 .................................... CCTGCCTTTCTGATTGCTGTCTTGATTCGC 17041 36 100.0 30 .................................... AGGATGTGGTCAAGTATGGTCAAGATGAGT 17107 36 100.0 30 .................................... CCATCAAAATTAGTGCCTTTGCTATTGGTA 17173 36 100.0 30 .................................... TGAGTACGCTTACAGCTTAGGCTTGGTACT 17239 36 100.0 30 .................................... GAAAGTTGCAAACTTCGTTCCATCTTGCGG 17305 36 100.0 30 .................................... CAAAAGCTAATAAATTGGCTGATTGCTGAC 17371 36 100.0 30 .................................... ACTTTCGGGTTTCGTTCAACCCTTGATACT 17437 36 100.0 30 .................................... GAGGTTAGTTATGCAAATTTCATCAGAAAA 17503 36 100.0 30 .................................... TAGCTAGAGCGGATATCAAAAATACTTCTA 17569 36 94.4 148 ................C...T............... GTTGTGTAGGTTCAAATCCTGTACTCTCCTTGTTTTGGAATATTTCCATTCAATGTTGTCAATTTTCCCGACGTATGTTGGGGTGGCCATCATAATGGCCTAATACTAAGACGACAATTCTACTCATTCCACGCAGGTGGGGGTGATC 17753 36 75.0 0 ..........A..........C...G..GAC..AAG | ========== ====== ====== ====== ==================================== ==================================================================================================================================================== ================== 35 36 98.7 34 GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC # Left flank : CAGTGAATCTTTACTTCAAAAGTACATGACCAAATTAACTAGTTATGTAGTTGATGAGCTAAGCGCAGATGGCAGAAACAGAATCATTACCTTCTATCGCGATTTACTAAATGCTGTTCAAGACGAGTTGCTTATGGAAGATTTGCCGCTTGAAATAAGTTTTGACACAGACTTGAAGAAACTCTTCAAATTTGGTGGTCTACACTTCAACAAGACACTCACTCGCGATCCATATGGTATAATCGAGACTGTACTTAGGATACATGACAGGTTAGATCTTAAGTCTACTGTTGTTTTTAGTAATGTAGCTCATTACTTAGATGCAGAACAGTTTATAGAAATATCTAAGCTGTGCTTAGAGCTAAAAAAGTCTATCATTTTTATCGAGTTTTGTAGCCATACGGATCAGGTTGTATATGGTGATGCAAAATTCAGTTATATCGATGAAGACCTTGTTGATTGGTACTAGCCTTAAATTAAAGCTGTGTTAAAAAACAACG # Right flank : GTGCTTTTCATGATTGAGAAGCACTTTTTTCTGTTGAACACAACAACTTAAAAAAACGCTAAATCAAACGCTTCACCAAGCAAGCAGGAAAAGATTATAGTAAAATATACTGGTTATAAAAAAGCTGAGCCAAGCTCAGCATCCCCAAAACAAAACTTAGTTGAGGAGAATAAACATATGCAAGATATTTATATTGTTGCGGCCAAGCGAACTCCATTTGGCCGTTACCACAAGCAATTGGCTGACTTTTCCGCCATCGACCTGGGCCAAATCGCCCTGCGCGGCGCGTTAAAAGAAGCCGGCCTTGACGCCGAAGCCCTGGATGCCCTCTTCATGGGCAATGTCCTGTCTGCCGGCTTAGGCCAAAACATAGCCCGGCAAATTGCTTTAAATGCCGGGATGCGGCAGGACTCAGTCGCCGTGTCCATCAACGAAGTCTGCGGCTCCAGCCTCAAGGCTGCCCGCCTGGCTGAAGCCCAAATGTTAATCGGTGACCTGGG # Questionable array : NO Score: 5.90 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.29, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //