Array 1 1320358-1317348 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLHA010000001.1 Streptococcus equi subsp. zooepidemicus strain SEZ_19-041 tig00000001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1320357 32 100.0 34 ................................ TTTTAGATCAAAAGGAACTCCATCAACTAAATAA 1320291 32 100.0 35 ................................ CAGTTCGTGGTGGCTTCTGGGTTAAACGATCGTTA 1320224 32 100.0 35 ................................ AACCAACGAGCAATGTGATAAGCAAAGGTTCCCAT 1320157 32 100.0 33 ................................ ACAATTGGTCTTGTTCAGACACTTCTTGTGATG 1320092 32 100.0 33 ................................ AAAATACTTGGGGTAACATTTCAGCATGTGTTG 1320027 32 100.0 33 ................................ AAAATACTTGGGGTAACATTTCAGCATGTGTTG 1319962 32 100.0 34 ................................ CCTTTTCTTTAGAAGTTAACTTATCTTCAGGAAC 1319896 32 100.0 33 ................................ TATGGAACCAACTTATCTGAATGGTGAGGTTGT 1319831 32 100.0 34 ................................ ATGCAAATGTTGGATTGTTGCCGCAAATTGTCAG 1319765 32 100.0 33 ................................ CTCGGCCAGTTTTTCAGCAGCCTGAACCTTGCT 1319700 32 100.0 36 ................................ TGTACTTATTATTGGTTATTTTGTGGGTACAGTAAA 1319632 32 100.0 34 ................................ TTGATACGTATGATAAGATAGGTGGTTTACGTTA 1319566 32 100.0 35 ................................ AAAAGCACAAATAGTTTTACCCCTACCCCCGTATG 1319499 32 100.0 34 ................................ ATAAATAACTTCTGACTTAATTGATTTAATTTTT 1319433 32 100.0 35 ................................ TTTCTGCTTTAGTTGGCTTAACTTTATCTGCTGTA 1319366 32 100.0 34 ................................ TATTGGGCAACAAAAAAATAAAAAAGTTGCCCAA 1319300 32 100.0 34 ................................ TCGATTTTATCCGTGAAGGCGACATAGTGGTTGT 1319234 32 100.0 35 ................................ TTTCTGTGTTCTTCATAATTCCCACCAATCTTAAT 1319167 32 100.0 37 ................................ GAAACTAAATTTGTAAAAAAATACTAGAAATCTTCCA 1319098 32 100.0 34 ................................ CTTAGTCTCTTTAGACATATTTGCTGTTGATTTT 1319032 32 100.0 33 ................................ AAGCCACTCCCAAATAAGATGAAATTGGCCATT 1318967 32 100.0 35 ................................ TGCAGGTTGTCGGTATCTGGTTTTGTCGTTTTGTA 1318900 32 100.0 35 ................................ CAACTGAATATCAGCCAACACGCCAGTTGTATCCA 1318833 32 100.0 34 ................................ TGTGGGAGAATTGTCGAATATAGATGATGTAGTC 1318767 32 100.0 34 ................................ AAGTCACGTCCGGTTTGGTCTGGGTCACCATATT 1318701 32 100.0 34 ................................ TACGCATATAAGATAGACCTTTTAGGGTCATAAT 1318635 32 100.0 34 ................................ GCTAACGAACAATTGGAAGAACAAAATAAAGTTG 1318569 32 100.0 35 ................................ TAAAAATGTCGAAGATGTTGTCAATCTCTCCAGTC 1318502 32 100.0 33 ................................ CGATAATCCATTACCACCAAACTCAAACAGAGC 1318437 32 90.6 33 .........CA.A................... GTTGTGGTATTGGTCTGATAACCATTTCCCCAA 1318372 32 90.6 34 .........CA.A................... TTTTCAAATTGGTTAAAGTCTTACCCTCAAAATT 1318306 32 90.6 33 .........CA.A................... ATTAGTCCCAGCATGGTAGAAACCAAAGAGATT 1318241 32 90.6 34 .........CA.A................... AATGGGTGTTTTTTATCGTTAAGAGATAAATGCT 1318175 32 90.6 34 .........CA.A................... GTGGGGTACTTGAATGAGCAATCTAGTATTATCG 1318109 32 90.6 34 .........CA.A................... GACTTGATATGGATACCTTTATCCAAGTCCCCAG 1318043 32 90.6 35 .........CA.A................... GGAGACGGTGGAAAAACGGCTTGCGTTGTAGGGAT 1317976 32 90.6 33 .........CA.A................... TTTTCAGCCTCAGCCTTAGCTTGTACAGCTTGA 1317911 32 90.6 33 .........CA.A................... ATAATTTATCTTTGATATTGTACAATATATTGT 1317846 32 90.6 33 .........CA.A................... AAGCTCTTTATCTTTAGCTGCAAGGACTTCTGC 1317781 32 90.6 35 .........CA.A................... TTTAACGCCTGCGGATAAAGGCATAATAAAAAAAA 1317714 32 90.6 34 .........CA.A................... TACGATTATCATTTAAATACTAAAAAAACTACAG 1317648 32 87.5 36 ......A..CA.A................... CATATCTCCTTGGGTTATCTGTGCCATCAAGGTTAG 1317580 32 90.6 35 .........CA.A................... TGATGAAGCTGCTACAAAGCGTAAGGAGGAGTTAG 1317513 32 100.0 35 ................................ TTTGGCATGCCTCACATCAGACTCATGTCTAGCAT 1317446 32 100.0 35 ................................ CCGACACTGCGAACTAATCATTTGTGACTCCTTTC 1317379 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 46 32 97.1 34 GTCTCGCCCTTTGCGGGCGAGTGGATTGAAAT # Left flank : TAAGGCTATTCGAGGGGATATTGATAGCTACCCACCTTTTATGATTTAGGAGATTACTGATGATGGTATTGGTTACCTATGATGTGAATACAGAAACAGCATCAGGGCGAAAACGGCTACGTCAGGTAGCAAAATTGTGTGTTGATTATGGCCAGCGCGTGCAGCATTCGGTCTTCGAATGCTCGGTAACACCTGCTGAATTTGTTGAGATCAAGCATAAGCTGACGACGATTATTGATACAGAAGTGGATAGTATTCGTTTTTACTTGTTAGGAAAGCACTGGCAAAATCGTGTCGAGACACTAGGGCGTTCTGATAGCTATGATCCTGATATAGGTGTCCTACTTCTGTAAAAGGAGTGAGTGCGAGCCTGGGTCACTCATAAAATGCTGTGAGACTCGCGCTAAAATAAGCTAAAAAATAGAGAAATGGGAGGTTATAGCTAAATATGTTATTAGCTAGCCTGTGTCATTTCTCTATAAACTGTGCTATACTGCGCA # Right flank : TTTGCTGCTATGCAAGGAGTGACACTGATTGAAGTCGCTCTCTTCTCGAGGGCGTGGTCCGTATCCCTGGTACTTTTCATGAAGGGATAAATCATATCACATTAATCAAGTTGATTTAAGTTTTTTATGGTACTATGTCAAATAGATAAAAATCTCTGTGTCAAGTGTAGTGGGTGACTGATAACTAAGCACGAGAGGAGACGAAGGTCGCCTTCTCTTTTATGATGTTCAAAGCAAGGTAAATACTTTTCTTGAAGTTGTCAACGTTTCTGAATCCAAAAGCATTGCGCTTGATACCTTTGATAAATTTGTTAGTTGCTTCAAGCTTGGCGTTAGAATAAGGCAGTTCAATGGCATTGATGATATAGTCGTTATAGCGTATAAAGGTGTTTAAAGTCGTTTTGAAGGTGTGATTGAGATGAGGCAAAGCATCTTGACTTAACCCAAAGAAGAGCTCTGTCTTCTTTTCTTGCAAGTGAAAAAGAAGTCATTGGTACAGA # Questionable array : NO Score: 9.11 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCGCCCTTTGCGGGCGAGTGGATTGAAAT # Alternate repeat : GTCTCGCCCCATACGGGCGAGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : NA //