Array 1 226759-226192 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBNA01000059.1 Acinetobacter sp. Ag2 JX07_contig_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 226758 28 100.0 32 ............................ ATCGCAGTATCTTCAGTAATGTTGTTGGTGAT 226698 28 100.0 32 ............................ AACATAAGAGTGCCCACGCACCGCATGGGCGA 226638 28 100.0 32 ............................ TTAAAAATAAGATATGAGAAAAAAGACAGTGT 226578 28 96.4 32 ....................T....... TAAAGTTTGACTTTTTTAATGCCATATTCTGA 226518 28 100.0 31 ............................ AAAAAGTTAATTCAATTTACTGATATGGTTA 226459 28 100.0 32 ............................ AATCATTTGCTTGAATAATTGCTCTGCAATTT 226399 28 100.0 32 ............................ TGACTTCGAGCTACTGCACAGCCGTCATTGTT 226339 28 100.0 32 ............................ TAATAGAAACGAGAAATAATCACGAATAATAT 226279 28 100.0 32 ............................ TACCAATATTTGGGATGATGGTACATTTACTT 226219 28 96.4 0 .....................C...... | ========== ====== ====== ====== ============================ ================================ ================== 10 28 99.3 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : TTCCAGAAACAGACTTGGAATCATACATAATTCAAAATTTTATTCTTATAAAAACAATAAGCACTATTTTTGATGAAATTTACGTTATAGCACAAGTTTTATTGAACTTTAACATCATATAAAAATAATCTTTTTTAGCAGTTTATTGAGTTGCAAAGGAAGTATGTATTATCGTTTGCAAGATAAATTAAATTTTAAATATTTGATTGATAAATAAATTATTTTATATGAGGTATGTCGTATGATTCTAAGGAGTGAATCTATTAGAGTTTGTATTATATACTGCTATAACTTGTTGCTGATGAGGCAAAAGGGAACAATTTAGGGAAATATGCTTTTAATAGAATTACGATTGTTCGAATATTTTAACCCAATATTTTTTTACTCTTTAGCAACTGAAAAAAATCAATAAGTTATATTGGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATCACTTTATTTTTTGATCTAAAATTATA # Right flank : AATTGTTAAACCTCTCTGATGATTTTAAAAATTTATAGTTGTATAAATTGTTTATTTTATAGCAATAAAAAAAGCCCACTTGAATGAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGCATGCGATTATAAGGATATATCACGAGTGGTCAAGCCTTTGATGTCATCTTTTCTTCATTTTTGACTTGTATGCTTTTTATTTAAACAAATAAGATCAAAATTAAAAAAATGGATTTGAGTGGTTGCAAAGCGAGAGCTGACTTGTTAGATTAAAAACATAAAGAGCGTTTAAGTTTAACTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGCGATGACGACGCTAACTATTTCTCAAATTTTTGAAAAATTTTCTTTTTATCAAGAAAACTACCTTTCTATCCTGCA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 76971-75263 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBNA01000044.1 Acinetobacter sp. Ag2 JX07_contig_34, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 76970 28 100.0 32 ............................ TTGAAGCTTTGAAAGAATTATTGGCAGGTACG 76910 28 100.0 32 ............................ TCAAACTGACGATATAGTTAATAATTTTCCGA 76850 28 100.0 32 ............................ TCTGTCACAAACATTAAAGATTGAAATAAATA 76790 28 100.0 32 ............................ TCAAACTGACGATATAGTTAATAATTTTCCGA 76730 28 100.0 32 ............................ TCCTCAGCAAAAGACTCAAGCTTTTCCTAAGA 76670 28 100.0 32 ............................ TTTAAGAGATAGTGAGCTTATACATATTCTCG 76610 28 100.0 32 ............................ GACCAGAAAATGTCTTTTTCATGTTGCGAAAA 76550 28 100.0 32 ............................ CGTAGGCGCGAACTGGAGAAATATATGTCATT 76490 28 100.0 32 ............................ TTTCTGATACTGCTAAATCTGAAATCCGTTCG 76430 28 100.0 32 ............................ GTAGCTCTAATTTTTTAAGGATTGGCAAAATA 76370 28 100.0 32 ............................ AAAATCATCTTAATTCATCACAACAAATTCAA 76310 28 100.0 32 ............................ AGAGGTAAAAGTTTGACGACCAAAAATATAAT 76250 28 100.0 32 ............................ GAATTGATCTTTAACAATTTGAATTGCTGAAT 76190 28 100.0 32 ............................ TGTGGGAAATACAGCAGTTGGATATTGATAAT 76130 28 100.0 32 ............................ ATCCAACGCCCTGTATCAGTCCATAAATTGCT 76070 28 100.0 32 ............................ ATATCTATTTGTTGCTTTACATTTATAAGTTT 76010 28 100.0 32 ............................ AGTGTGTAATTTGCTCTTGAACAAATGCGCAA 75950 28 100.0 32 ............................ TCTAGGGTTAATACCATCATAAGCCACATCAT 75890 28 100.0 32 ............................ ACTCTGATATCCCAGTGCAGAAATATTAAAAA 75830 28 100.0 32 ............................ ACCCGATCAAATGCGTCGGGTTCGCAGTTTTT 75770 28 100.0 32 ............................ AAGCATTTAATTAAAAATCAAATTCTAAGACA 75710 28 100.0 32 ............................ ACCTCGATAAGTTGTACCGATTGGCATGGTTG 75650 28 89.3 32 .......A..G......T.......... AAGACGATTAGATAGCTCACTAATCAAGCTTC 75590 28 89.3 32 .......A..G......T.......... AGTGCATTTAACATCAATCTACATTATGTGAA 75530 28 89.3 32 .......A..G......T.......... ACAATCTGAGCCATCGTAGCCACATTAACGAT 75470 28 89.3 32 .......A..G......T.......... ATCCTCTTCGTAAATATCAAAACCAATTCTTA 75410 28 89.3 32 .......A..G......T.......... TGCAGAAGACTATATAGACAAAACTGTCGATA 75350 28 89.3 32 .......A..G......T.......... TTGCTAACGTTTTGAATTGCCGAAAAGTCTGA 75290 28 67.9 0 .......A..GT...AATCC....A... | ========== ====== ====== ====== ============================ ================================ ================== 29 28 96.7 32 GTTCACTGCCACATAGGCAGCTTAGAAA # Left flank : TTGAATATAAGAAAATGGTTAGATCGGTTTCCTGATTATGTGCATATCACAGGTGTACGTCCTGTTCCTGAAAAAGTAACGGCTTACGCAGTTTATAAACGTAAGCAAGTTAAAACCAACGCTGAACGTTTGGCTCGCCATCGAGTCAAAAGAGGAGATATTGGCTTTGATGAAGCATTGAGCCGTTATCTTCAAGTGGTGACAACAACTGATTTACCTTATGTCCAAATGCTAAGTTTAAGTACATCGGATGAACAAGATAAAAAGCGTTTTAAGCTATTTATAGAAAAGCAGATCACTGAAAAATCTGAAACTCAGGTTTTTAGTACATATGGGTTAAGTTCTGTGTCTACAGTACCCGAGTTTTAACCCAATATTTTTTCACTCTTTAACAGTCTAATTAAATCAATAAGTTATGGTGGTGGGTTGAAACTTTGGTCTTTTGTAGATTTTTAGTCTTAACTCACTGTTATAACTTTATTTTTTGTTTTAAAATTACT # Right flank : TATAAACGCCTTAACATCTTCGCTAAATTTAGGAAAGTACAAACGATATGGAATAATTTTTATAGTAAATAAAAGATGATAATTTAAATGATAATTATTTGCATTATTAATTGCATTTGAATATTTGGTAAAATACAATGTGCAACAATTCTTACACAATCCCTCCGTAATTTGAGTTGCGTATTAACATGAATAAACAATTAACACTTCAAGCACTATCTCTCTCCATACTCTCAGCAATGTCAATTTCAACATATGCAAACGAGACTTCAGAAGACTCTTCCAAGCTTAAAACGATCGTCGTTACAGCAAGTAGTCAGGCGGTCGATGTTAAAGAAGCACCAGCCAGTATTAGTGTGATTACCAGTGAAGATATAGAAAAACAACCGGTGGGTAGTCTTGGCGAGTTATTAAGTAAAGTACCTGGGGTTACTGGTGGAATTAGTCCTAGCAAAGAAGGCTCTAAAATTAAACTACGTGGTTTACCTGACAATTACACA # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCACATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCACATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 982-52 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBNA01000005.1 Acinetobacter sp. Ag2 JX07_contig_58, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 981 28 100.0 32 ............................ CAACGTTTCCGTAATAAATTAGGCGTTTCAGC 921 28 100.0 33 ............................ GAATCAGCTTCGGGACAGAGTTGCCAGTCTAAT 860 28 100.0 33 ............................ ATTGACGGAAATCACACCAGGATAATTAATCCC 799 28 100.0 32 ............................ AAAAAACTTGGTTTCAGCGTTTCCGTAACAAA 739 28 100.0 32 ............................ CTACAAAGCTTTTGTCGATCTTTACAACACGT 679 28 100.0 32 ............................ ATTGCTATTCGTATCGTTATTACGGCGCATAA 619 28 100.0 32 ............................ GATCAAGGGAATCAGTAGGATAGCAAAGAGTT 559 28 100.0 32 ............................ TTGTTGTGTGTAAGCCTGATACTTTCCATTAA 499 28 100.0 32 ............................ TCCTAATTTTCCATTAACTCGATTTGAATTAT 439 28 100.0 32 ............................ TGATAAATCTGAACGGTGCTCACAGTTCTTAT 379 28 100.0 32 ............................ AACACCATTTTTTGTATAAGTTGGCTGTGAGA 319 28 100.0 32 ............................ ATAATTCAAACTCCGTGTGAACGTGTGAATAA 259 28 100.0 32 ............................ CATTACAGTAATTCCAGTTGTTTTACCGTTTT 199 28 100.0 32 ............................ AGAGATCCGAGCATTGTTTAAAGACTATAAAA 139 28 96.4 32 ...C........................ TGTAGGTGCAGAATATAACCCTGCGCCTGTTC 79 28 96.4 0 ...C........................ | ========== ====== ====== ====== ============================ ================================= ================== 16 28 99.6 32 GTTTACTACCGTATAGGTAGCTTAGAAA # Left flank : GCTTTAAATGATGCCAAATTTAGTAAACGGATCTCAGATAGACAATTTAATTTAATTCAAACAATTATGTTTGTAAGAGGACAGACGAAAAAGTTTTTTAACCAAGCTGAGTTATATCGAATACCACAAATCCAAGTTTTATATACAGGTAAAACAGAACGTACTTTTTATCGTGATATTGCTAGATTGGTTGAGCTAAACTTTTTAGATGATCAAGATGGATTGATTGTTGTTGGCGAGTCAGTTTAAATATGATGAGTTTATAAATTGCTTGGCAATATTTTATAAATCTTTTGCAACTGAGGCAAAAGTAGGAAAATTTGGATTGTATAGATTTTAGTGAAACAGAAGATAATTCTAAAATTTTACCCCAATATTTTTTAACTCTTTAACAACTGAATAAAATCAATAAATTATAATCGTAAATAGAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATTATTTTATTTTTTGTTTTAAAGTTATA # Right flank : AAACAACGGCAGAATTAGAGGGTACAGCTTTATGTTCACTACCGTATAGGTA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTACTACCGTATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: R [matched GTTTACTACCGTATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 3194-2624 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBNA01000005.1 Acinetobacter sp. Ag2 JX07_contig_58, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3193 28 100.0 32 ............................ TCAAGAAGTGTACAAAGTTTTAAACGGGCAAT 3133 28 100.0 32 ............................ TGTTTGCCAAGATTGTGCCAAACGTAAATATA 3073 28 100.0 32 ............................ AGTATGACCACCATCCATATAACCTTTAGCAC 3013 28 100.0 32 ............................ AGCATTAGCTGTAGCCGCTGCAATATTTGCAT 2953 28 100.0 32 ............................ AAACTAAAATTCTAATTACTGGTGCCGATGGC 2893 28 100.0 32 ............................ TTGTTGGAATCTAGACCAGAGACGATCACCCA 2833 28 100.0 32 ............................ AATAGCCGTGAATGCAGGTACACCATTTTTAA 2773 28 92.9 32 ....G......C................ AGTAGATGCCTCGCTTGTCGAATTAGACAGTG 2713 28 92.9 32 ....G......C................ TGGTAATGCAACAGCACAAGATGATTGGAGAA 2653 28 89.3 0 .........T.........A.......C | CA [2627] ========== ====== ====== ====== ============================ ================================ ================== 10 28 97.5 32 GTTCACTACCGTATAGGTAGCTTAGAAA # Left flank : GTATAGGTAGCTTAGAAATCAGCAATTAGCAAAAAAAGCTTTGGATGACA # Right flank : TTAAAATTAATTGGATATAGGCTTAGTGTGACTGGAAAAGTCTAATCAATTGAAAAATTTCAATATTATGTTTAAAACAAAATTTGACAAAATGAGTGACATAATCTTTGACATTATTACAATTAAAATTTGACTAAATTTATGATTTATAATAATAATGTTTTGACATTTTATTTGACAAAAAAATTGACAAAATGCCTGATCAAAGTAAAGTTTGGCTAGATGACACAACTTTAAGAGTCATGACGTACAAGTCCGGCTCTTTTACCTTTCAGCTTGGGTTTGACTTAGAGCAGGTTACACCTATGCTTGATCGTGTAAACGATGCACAGAATAGATTTAATAAAATGCCAAGTTTGCCTCAAATTATAGATCAAGTACAAGAAAAGGTTTTAGCGAGTAGTATTTATAGTACAAATACCATTGAAGGTGGTCAATTTACAGAGCAAGAGACGAAGGAAATTTTAAGACTAGATCCTAAGACAATACAAAAGACCGAG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Alternate repeat : GTTCGCTACCGCATAGGTAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCACTACCGTATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 71877-72744 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBNA01000039.1 Acinetobacter sp. Ag2 JX07_contig_17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 71877 28 100.0 32 ............................ CCGAAGATAACCAAACAGTGGATTGGGTAGAA 71937 28 100.0 32 ............................ AGTAAGGTTGAAATGAGAAATTGCCACCAAAA 71997 28 100.0 32 ............................ ATCATTTCCCCATGAAATGAAATTCTCATACT 72057 28 100.0 32 ............................ AATAGTTACCAGTAATGCTAATCTTAAATTGC 72117 28 100.0 32 ............................ ACATCGAAGCGGGGCATAGCTCGCATATCGTT 72177 28 100.0 32 ............................ AAAAAATGCTATAGAGGAATCGGATATGAGCA 72237 28 100.0 32 ............................ CCCTGATTTTATTTCTTTTTCACAAGAGCAAT 72297 28 100.0 32 ............................ TTTTGAGGTGCAGCATAGATAATTTGAAATTG 72357 28 100.0 32 ............................ ATATTCATCATATCCAGTAACACGATATTTTT 72417 28 100.0 32 ............................ CCGACAATACTGATTAAACAGAATCCAGCAAT 72477 28 100.0 32 ............................ TTTTGGAGTTGTAACGTCGGGAACAATACTGC 72537 28 100.0 32 ............................ AGAAGCACAGGCAATGTATATCAAAGCGCGAG 72597 28 92.9 32 ..................C.T....... TTTCAATAAATAACAACGATCAAAACAATAAA 72657 28 100.0 32 ............................ ATTCATGGCATCGGTTGAAGTTTCAGATACAT 72717 28 96.4 0 .............G.............. | ========== ====== ====== ====== ============================ ================================ ================== 15 28 99.3 32 GTTCACTACCGTATAGGTAGCTTAGAAA # Left flank : ATGTAATAAGGGATTTAAGCGAAATCAGTAGCTTAAAGCCCTTTTTTTATGCGTATAATAATATGTGATAATATCAGCCTACTAGGTTTAAATGGTGAAATTAGCCGATCTAGCCGAATAATTTACGTCAAGATTACGTCAAGCTTTTGAGTTTAAGATAATGAAAATACCAAAACCGATTAAACGTGGTGAAGTTTGTTTTACTAAGAAAATAATGAAATGTAAGATTTCTTCATTTTCTAATGATAAATTAAATGAGTGGCATTAAAAACATGTGTGAATATTGGAAAATCTTTTAGTGATAAGATAAAAGTAGCTGATTTAGAGTATATAGGCTTAATTAATCAAACAAATATTCTAAAATTTTACCCCAATATTTTTTAACTCTTTAACAACTGAATAAAATCAATAAGTTATAATTGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATTATTTTATTTTTTGTTTTAAAATTATA # Right flank : AAAGATTTCTTCATTCGTAATTTGAATTGTTCAAAATTTGATTTATATTCATTTCTGTTTTATTATTTGCTTGGAGACGCCGAGTAGCGGTAACTACCCGACGCATTCTGTTAGTGAGCTGATTGAGAAATCAACAACAATAACAGGATGACAACGATGATTAGACAAAAGCGCATCGTAAACCTCCAAGGATTAATGTAACGAAACACCGTTACAGGTCACCCTAGCCCCAATGACTAGGGCAGGTTACTGTAACACAACAAAAAGCGCCCATGGGCGCTTTTTGTTGTTTAAAGAGATGAGGTTAACTACATCCTGTTCAGCGTTTGATTTCTTCTTCAATTACCATATTCACTTTCAATTCAGCGCGATCATTTATTTTATCTGTTTTGTACACTGAGAGACTTCAAGAGAACACCTGTTGTATAACTTGATCATTCTCTAACAAGCATTCACTACCGTATAGGTAGCTTAGAAAATTGTGGTAAAAATTAACTTAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTTCACTACCGTATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [86.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //