Array 1 81371-80476 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_RCES01000002.1 Streptococcus agalactiae strain UI818 NODE_2_length_345180_cov_63.7664_ID_3, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	====================================	================================	==================
     81370	    36	 100.0	    30	....................................	AAAACGTCGTAAACGTGTCATTGATTGTAT  	
     81304	    36	 100.0	    30	....................................	AAAATTGATTGACAGTCGGAACAGTCGTCT  	
     81238	    36	 100.0	    30	....................................	GGTTCTTCCTTATGACGTTATCCTGAAGGA  	
     81172	    36	 100.0	    30	....................................	TCCTCCTGTCCCTTCTTTCCAATTACTGTC  	
     81106	    36	 100.0	    30	....................................	AGGCTTATTATGATAATAAACAATATAAAC  	
     81040	    36	 100.0	    30	....................................	TAGTAAAAAAGCTAAACTTAATAAAAAATA  	
     80974	    36	 100.0	    32	....................................	TTTTGGAAAGCTCTTTAGGAAGGAAGTGGATA	
     80906	    36	 100.0	    30	....................................	CGGCTATATAAGACAGGTTTATGAGGATAG  	
     80840	    36	 100.0	    30	....................................	TCCTGTTACTCGTAAAGTCACTAAGACAGT  	
     80774	    36	 100.0	    29	....................................	CTTCCCACTTAACTGTTTTTAGAAAGTGT   	
     80709	    36	 100.0	    30	....................................	TCTTCACGTTTGTTAGATTCTGATTTTGAT  	
     80643	    36	 100.0	    30	....................................	TCAGTTGACCAGAATGAATCTCAACTTCAT  	
     80577	    36	 100.0	    30	....................................	TACTTGACGAATTGAAGATGACGGAATTTA  	
     80511	    36	 100.0	     0	....................................	|                               	
==========	======	======	======	====================================	================================	==================
        14	    36	 100.0	    30	GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	                                	       

# Left flank :   CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG
# Right flank :  AAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATGA

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:58.33%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-0.20,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,4.87   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//