Array 1 45472-49030 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACDXZ010000011.1 Psychrobacter sp. D2 111D_2_scaffold11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 45472 31 100.0 33 ............................... TAATCGCTTGCGTATGGTCTCTTTGCTGATTGG 45536 31 100.0 36 ............................... ATCAAACCCCCTTGGTCGCCACTTTTTAAATGTGGG 45603 31 100.0 34 ............................... ATCTAATAGGGGCGTATCTTCTAATTTAATACCG 45668 31 100.0 34 ............................... ATATCTAGCTACTTCTCCTTCAGGATAGGAAGCG 45733 31 100.0 36 ............................... GTAAGGCCCATGACTAAAGTATTCTGACTCTTCCAG 45800 31 100.0 35 ............................... GTGCTGTGCTGGAGGCTTGCTATGTTTGATCCAAG 45866 31 100.0 34 ............................... AGAAATAGGTGCTGGCAAAAGAATTGGAGACAAG 45931 31 100.0 35 ............................... AGACAAGCCGATAATCATTTTCAAGCGGCTAATAG 45997 31 100.0 34 ............................... AGCACGATTAGATGTGGCATTAGGGCATATGCTG 46062 31 100.0 34 ............................... AGATGAAGTGCTTAAAGGTTACCTAAAAGATGCG 46127 31 100.0 33 ............................... ATGGGTTGCCTCACTATGTTTGACTGTTAATCG 46191 31 100.0 36 ............................... CGCCAGAACAAAACTACGAAGTAACCTGCGGCAACG 46258 31 100.0 33 ............................... TTGGATTGATGCAAAGAAGCAGCTACCGAAAGG 46322 31 100.0 33 ............................... ACAACGTGTATTCAAAAAATCATTACACTGACG 46386 31 100.0 34 ............................... CTGACAAACCATCAATCTGACGTATAATCGCTGG 46451 31 100.0 33 ............................... TTTATCAATCATGACGCTTTCAGCCGAATTGAG 46515 31 100.0 34 ............................... ATTTATGATGAAGTGTATACAAGTTTGCTACTAG 46580 31 100.0 35 ............................... TCAAATGCCTAGCGTCATGGGTATCGAGAAAGGCG 46646 31 100.0 33 ............................... TGCAATCTCTTTTGACGACGCTTGAGCGAGTGG 46710 31 100.0 35 ............................... GCTGAAATAGCATAGCTTGCAGCCTGAGTATGTCG 46776 31 100.0 34 ............................... TAGATAAAGGTGCAGCAATGTCTAGCGCCTATGG 46841 31 100.0 34 ............................... TCCTTCCTTCACTAGTAGCAGCGCCCAGCATGGG 46906 31 100.0 35 ............................... ATCAAGACCGTAAGCAAAAATTCGTTATTGAGTGG 46972 31 100.0 34 ............................... TCGTCAATCTCGTCATCATAGAGTAGCGCTGATG 47037 31 100.0 35 ............................... TAAAAATGCCGACTCATCAATAAAATACAATGATG 47103 31 100.0 33 ............................... GGTCAAGTCAAAATCATCGCTGAAAATATCAAG 47167 31 100.0 35 ............................... ATGAGATTGAGCAGCAACCGCGCTGGCGTGCTATG 47233 31 100.0 35 ............................... CCACAGAAACGCGCTGAGAACAAGCCAAACGGCGG 47299 31 100.0 35 ............................... CCAAAAGAGATTGACCGCATAAGAGTGAGCGAGCG 47365 31 100.0 33 ............................... AGCATCGACCGCTTAAAAGACATACGTGACTGG 47429 31 100.0 35 ............................... ACCGCCCGGGTCGCTAGGGTGATTGATATAACCGG 47495 31 100.0 34 ............................... ACAAAGTGGAAGTACAGAAAGGGCATAATGACTG 47560 31 100.0 35 ............................... CTAGTAAGGCGGTTTTATCTAATGGTAATAGTCTG 47626 31 100.0 32 ............................... TTTTAGTAAAGAAAATAAACCAAAACAAACAG 47689 31 100.0 33 ............................... TTTTTGGCTCTGCATGGCTTTGGAAGCACTTAT 47753 31 90.3 34 .....T..A.......C.............. CGACTGACCTCTTTTTTATTTATCTATGGAGTAC G [47757] 47819 31 90.3 34 .....T..A.......C.............. ATCAGTTGCGCTTGGTCTATGGCCCATTATCTGC G [47823] 47885 31 90.3 34 .....T..A.......C.............. GCAGAACGTCATAAGCTCATTTACAGAGCAATCA G [47889] 47951 31 90.3 33 .....T..A.......C.............. CATTTTTGGGCAAGATTGACACCTGCTGCCTTG G [47955] 48016 31 90.3 34 .....T..A.......C.............. AATACATGGATAGGTATTTCGCCCTCTGCTGAAA G [48021] 48082 31 90.3 33 .....T..A.......C.............. TATTCAGTTTGATGCTTCGTTAGTCGAAACTAT G [48086] 48147 31 90.3 34 .....T..A.......C.............. AAAACAGACGCCCGATTGGTATGTCGAGCCGTTA G [48151] 48213 31 90.3 35 .....T..A.......C.............. CTCAGTTAATCGGTGAGGGTGTTGATTGGGTTTTA G [48217] 48280 31 90.3 33 .....T..A.......C.............. TATCACACGCTATCAAAACCACCTTTAGTAATA G [48284] 48345 31 90.3 33 .....T..A.......C.............. CACGCCCTGTGCGCCAAGAAATGAGCCTGAATA G [48349] 48410 31 90.3 33 .....T..A.......C.............. ATAATCATTACTCTATCATTAGTGTGTAGTAAA G [48414] 48475 31 90.3 34 .....T..A.......C.............. CACCAAGCCGAGTTTTTATCACCTAATAGTGAAT G [48479] 48541 31 90.3 32 .....T..A.......C.............. CGCTACCTGCGAACATATCACATACCGTTTGT G [48545] 48605 31 90.3 33 .....T..A.......C.............. CATTTTTGGGCAAGATTGACACCTGCTGCCTTG G [48609] 48670 31 90.3 33 .....T..A.......C.............. TTTACTGCGTGTTGGATGCAGCCGCTATTATCT G [48675] 48735 31 90.3 34 .....T..A.......C.............. CATATATTTAACATGGGTGATTCTATTTCAACAG G [48739] 48801 31 93.5 36 ........A.........T............ GACAAAGCAAGCGGTTATGGCTTTGGCTTGAATAAG C [48807] 48869 31 90.3 34 ........A.........T...........A GGGGATATAGGCAGTCGCTTAGCTGCAATTAATT C [48875] 48935 31 93.5 32 ........A.........T............ ACGATCAATAAGCGTGTAGTACGCCTGATCGT C [48941] 48999 31 90.3 0 ........A.........T...........T | C [49005] ========== ====== ====== ====== =============================== ==================================== ================== 55 31 96.6 34 TTCGCACCTTCACGGGTGCGTGGATTGAAAC # Left flank : GATGCAAACTTTGCAAAACGGTTACGTCACGTAGCCAAGCACTGTCTAAACTTTGGGCAGCGGGTGCAATATTCGGTATTTGAAATCGAGGTCAATCCTGCGGAGTGGGCTACTCTTAAAGCTAAGCTTGAGGACATTATTAATCATGATGTAGATAGTTTACGTTATTATTATCTTGGTAAAAACTGGCGGAATAAAGTGGAACACATTGGAGCAAAACCTGTGCTAGACTTAAACGATGTACTGCTATTTTAGCGGTTGTTATCATAAAATCTATTATTTGACCGTAATAAGGTCAATGCGAACCTATAGCGTACATAAAATCTCTAAGAGACTCGCAAAAGGGGCGTAATGCTATTTAACAACCTGATTTTATTACCTTTATTTTTTTATAATAAAAATTTAGTGAGTGTACTACTTGCCAAATTCGCTTGTGGTTTAGACGTTCGCAAATTCCAAGGTTTTTTCTTAACCTTATTAGTGACTTAGACCATAGGCAG # Right flank : TACTTCTAGTTAACTAACTTTTCAAATTTGGGCGTAGATCCTATATCTATAAACATAAAACTAAATAGCACGTCATATGCTGTCGCTTAATTTAAGTTTTTGCCTCAAAACCTCACAAATTGGCTTTTAATTGTTTGCTAATACTCGTAAATTATTAGTGGAGGTCAATACACAGGATATAACGACCAAGTCATCAACTCGATATCTTAGTGGGAAAGATATGAAATCACTATCGATCGCTAAACTACAAACAATCAATGTGCTTGTATATTCAGAAATCATTAGTCTGTTTGATATTTATACCTGCCATATCAGACCACTTCTGAATAGCTAGGCTATCGAACTTGAGCAAAGTAATGCTTGCTCAAAACTTACCTGCTTTGTGAAAGAGGAGGAAAAGTGGTTCTTGCTCAATAACTTTGAGCTATTGCATATAGCAAAAAGCCCTTATATTGATTTTGATGTATTAAGAAAAGAAGTAGACGTGAAATATATACCAA # Questionable array : NO Score: 9.09 # Score Detail : 1:0, 2:3, 3:3, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCACCTTCACGGGTGCGTGGATTGAAAC # Alternate repeat : TTCGCTCCATCACGGGCGCGTGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTCACGGGTGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-30] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //