Array 1 2777990-2774483 **** Predicted by CRISPRDetect 2.4 *** >NZ_UIGR01000001.1 Chromobacterium violaceum strain NCTC8684, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 2777989 29 100.0 32 ............................. ATGAGCGACTACATCGGCCTCAATCCGCATAC 2777928 29 100.0 32 ............................. TCGTTTGGAATGACGATGCGCAGGTATGCGAC 2777867 29 100.0 32 ............................. CACTGGGGCAAATACAACCCTGGCGAGGTGGC 2777806 29 100.0 32 ............................. ACCATGAGGCCGTTGACCCTGTCGAGGAAATG 2777745 29 100.0 32 ............................. TTGGCAGCGAAGCGCAGTTTACTGGTGGCCAT 2777684 29 100.0 32 ............................. GGGATGGTCCGGCCATTCTCATACCGGCTGCC 2777623 29 100.0 32 ............................. ATTTTGTATTCGTCCAACGTACACCCCCAAGA 2777562 29 100.0 32 ............................. ATGAACGCTAAGGCTGCGATAGAGAAATGTTG 2777501 29 100.0 32 ............................. CCGACCGGCGTCCAGTTCATCAGGTAGTCCAC 2777440 29 100.0 32 ............................. GCGCGAAGCTGGCGGAATGGAATCCGCAATAC 2777379 29 100.0 32 ............................. CCAAGGGTGGTGCCTGGCTATCCGGTGCGCAG 2777318 29 100.0 32 ............................. GGTAACTTATGGTTCTAATCTTCACCCCAACA 2777257 29 100.0 32 ............................. CGGGACATTGGGTGTTTCGGCTGCCGCAGGGG 2777196 29 100.0 32 ............................. CTGTTCGGATCCGGCTTGGGCGTGGGTAGCGC 2777135 29 100.0 32 ............................. ATTTCAATCATCTCTTGCCTCAGTATTCAGAG 2777074 29 100.0 32 ............................. AGGACCGGGACAGGTATACCGTAACACTTGAC 2777013 29 100.0 32 ............................. CGCGATGCGCGCCAAGCGATCAGCGTTCAGGT 2776952 29 100.0 33 ............................. GATGGCGGAGTCCAGTTTGAGGTTATGAGCAAG 2776890 29 100.0 32 ............................. TACTTTGATGAAATGGTTTTAGGCCCGACAGC 2776829 29 100.0 32 ............................. GCGAACGAAAGCAAGTCATCCCCTATTCCTGG 2776768 29 100.0 32 ............................. CCGTCGACGCCTGCGCCTGCCCCCGCTCCGGG 2776707 29 100.0 32 ............................. ACCGACATCACCTATTACCGCCAGGTCATGGA 2776646 29 100.0 32 ............................. TCATTGAACTGCGCAACGGCACCAAGAACGAA 2776585 29 96.6 32 ............................C AGGATTTGCCGGCCGCCGCCGGCACCGATCAC 2776524 29 100.0 32 ............................. CCTTCCGGCGGCCTCCATCCGAAGAATTCATC 2776463 29 100.0 32 ............................. CGCTTACCGTCATCGCTGACAAGATTGCGCGC 2776402 29 100.0 32 ............................. CTATGGTAAGGGCAGCCAGGAAGGCGAATGCA 2776341 29 100.0 32 ............................. GATGCATTCAACGACACCGTTGTCTGGCTACG 2776280 28 96.6 32 ........-.................... CGCCGGAGCCGGAGCAGGTCGTGATTACCGCT 2776220 29 100.0 34 ............................. GTGAACGCGTCCGTAAGGCGCGCAAATACGCCAA 2776157 29 100.0 32 ............................. GCGATGATGGCGGCGATGATGCCGCCGCCGGC 2776096 29 100.0 32 ............................. AGGAGCTGCCATGCGCTTTCTAATCGACGAGC 2776035 29 100.0 32 ............................. GTCGGGGTGGGCGACTTCGTCAACTTCACCGT 2775974 29 100.0 32 ............................. CATTACCTGCCAGAGGAGACGCTGGAATCGGA 2775913 29 100.0 32 ............................. TTCGTCGTGGATTGCGAGCATCACGGGCTGAC 2775852 29 100.0 32 ............................. ACCGGCTCGTTGCCGGCATCCTTCAGCTCCTC 2775791 29 100.0 32 ............................. TCCACCGCGCTGGCATATCCCAGGCGCTGCCA 2775730 29 100.0 32 ............................. CCCTTGACCTCATGAGCCTCCATCTCCCCACC 2775669 29 100.0 32 ............................. CGGCTAGCGGATGAGCGCGACCGGCTGCGGAT 2775608 29 100.0 32 ............................. TCGCTGCCGGGGCTGCGCATGTTCGCCCCCTT 2775547 29 100.0 32 ............................. GTCACGATCCAAACCGCCAGCATCCGCAACCT 2775486 29 100.0 32 ............................. CCAGCGCGCACCGGGGCCAGGACAAGCGGCAG 2775425 29 100.0 32 ............................. GCCGGTTGACCGTTGGCCAGATCGACACCGAG 2775364 29 100.0 32 ............................. TCACCTTCGCCGAGCGCCGCACCGAAACCGCC 2775303 28 96.6 32 ........-.................... GTATGCCTCGACATCAGCTACATGGGCATGAT 2775243 29 100.0 32 ............................. GTGGGCGCCCTGCGCGGTATACAGATAGAGAA 2775182 29 100.0 32 ............................. TCCGCTCGAACCGGGCGTGTGGCTGATCCCAG 2775121 29 100.0 32 ............................. CTATTGCAGTTGCTGCGGCGCTTTGCGCGGCC 2775060 29 100.0 32 ............................. TTTTCGGCGTCTTCCTTCTTGTGGGCGATGAC 2774999 29 100.0 32 ............................. GCCAAATCCTTCAGCGGCGCGCCGCTCTTCGC 2774938 29 100.0 32 ............................. ATGAAAATCTGGATGAACGTGGTGAAGCCTAG 2774877 29 100.0 32 ............................. GCCAGCAGCACCAGGGCGAATAGGGCGGCGAC 2774816 29 100.0 32 ............................. ACTTTGAGGACGCCATCAGCGGTGATGTGAAA 2774755 29 100.0 32 ............................. TCGATATGGTCGGCGGCCGGGCGCCAGCCAAG 2774694 29 100.0 32 ............................. TTGCCCAAGCCCGACCTGGCAGTCATCGTTGA 2774633 29 100.0 32 ............................. CCTGGAAACGTGCAGGGCAACCCGCAGCTGCC 2774572 29 100.0 32 ............................. TAAGTCGCCGTCAACTTGCCGTTGTCGTCGCG 2774511 29 82.8 0 ....................A...TG.TC | ========== ====== ====== ====== ============================= ================================== ================== 58 29 99.5 32 GTGTTCCCCACGCCCGTGGGGATGAACCG # Left flank : CGGACATCGAAACCATGCTGGACGCCGGCGGCCTGGACAAGCCGGAGGCGCAGGGCGTGGTGGACGCGGCGTTTCCCGAAGACGAGGGGCTGGGCGATGCTGGTCATCGTACTTGAGAACGCGCCGCCCCGGCTGCGCGGCCGGATGGCGATCTGGCTGCTGGAAATCCGCGCCGGCGTTTACGTGGGCAACTACAACCGCAAAATCCGCGATTACCTGTGGCAGCAGGTGGAAGAGGGGCTGGAAGACGGCAACGCGGTGATGGCTTGGCAGGCCGCCACCGAGGCCGGCTTCGACTTCGTCACGCTGGGCGCCAACCGCCGCATCCCGGCCGAGTTCGACGGCGCGAAATTGGTGTCTTTTTTGCCGCCGCCGGTGTCGGAAGCGGGGGGCGAATAGAGGGCGGGTGGGGTGTGGAGAAAGGTAGGTTTGGCTCTTTAAAAATCGGTAGATTTTTGAGTGGTAATTTTGTTTTGAAAAATCAGTTGCTTGCAATTGGT # Right flank : CTGCCCGTCTATCGCTTGCTTAATCCGCGGCCGTCGCGTTGCCCGATGCGCTTGCGATCGACGCGCCGTGGCTTGCCGTCCGAGGAGGGCGCTTCCTATGCTGCAAGAATCGATGTTAGAGGAATCGCCATGCAGCAGTTAAGAGTGAGTGTTCTGGTTGCCGCGCTGTTTCTCGTCGTCGCCGTGGTGTCCAAGACGCTGGCCAGCTCCGTCACGGAGACCGTGCCGGTGTGGCTGGGCAGCGGGGTGACTTTTTCCGCGTTGCTGATTTCTCCGCGCTGGCGCTGGCCGGCCATTCTTGCCGGCGTGTGGCTGGCGTCGGCGATATGGGGGATGTCCGCGCATGGCCTGGGGCTGGCCGGTGCGGCGGCGTTCGCGGGGATAGAGGTGGTCAGCGGAGCCGTTGGCTGCTGGGTGGCCGGACTGGGGCGCAACGATCCGGATTCCCCGATCGGCATGGCCTTGCTTCTTTGCGGCGCGGCGCTGGCGTCCTGCCTGGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGCCCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGCCCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2789116-2786765 **** Predicted by CRISPRDetect 2.4 *** >NZ_UIGR01000001.1 Chromobacterium violaceum strain NCTC8684, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2789115 29 100.0 32 ............................. ACCTGGCCTTCCTTCGTGGCGATGGCAGCGGC 2789054 29 100.0 33 ............................. CAGGCCGGCTCAATAGTCCCGTATCAGGGTTAT 2788992 29 100.0 32 ............................. CCCCCGGCTTGCGGGGGCTTGTTCATCCCCAT 2788931 29 100.0 32 ............................. GAGCTGGACGCCCTGATGCGCGCCGCGGAGCG 2788870 29 100.0 32 ............................. CCCGTCGAGTCCGGGCTTTCTCATATGTGAAT 2788809 29 100.0 33 ............................. TGCCGTCCTCCGCAATAATTGTCGCGACGTCTG 2788747 29 96.6 32 ............................T ACTACTACACCATCGTCACCCCGAGATAAAAC 2788686 29 100.0 33 ............................. TATTTTGACGAAATGGTTTTAGGCCCGACAGCC 2788624 29 100.0 32 ............................. ATGAGCGCAGCAAAACTGCGCTTGATGTGGCT 2788563 29 100.0 32 ............................. CGCCAGCTCGCTGAGAAGCTTGTCCTTGAAAA 2788502 29 100.0 32 ............................. CCCCGCAACTGCGGGGCTTTGTTATTTCCAGC 2788441 29 100.0 32 ............................. CGCCGGCCACACGTAAGCGCTGCCCGGTTACA 2788380 29 100.0 32 ............................. CCGCGCGCGCCACGCTGCTGGCGTATGCCGAG 2788319 29 100.0 32 ............................. CAATCTGCAGATTTCTCGCTGTACGGTTTTCG 2788258 29 100.0 32 ............................. CCGCCTGGGCCACCCAGCAAGCGCTCCGTCAC 2788197 29 100.0 32 ............................. CTGCGCATGCTCACCCCACGCGAGCTCTACAA 2788136 29 100.0 32 ............................. GGTGAGGCGGTCAGCAAAAACGATACGAGAAC 2788075 29 100.0 32 ............................. GCTCGCTGGCGGCCGCTGCCGGTTCAGGATCC 2788014 29 100.0 32 ............................. ACCTTCGCCAACAAGACCCAGGCGCAGGCCGC 2787953 29 100.0 32 ............................. CTGCTGGTGGCCGGAGGGCGCGGAGGTGGAAA 2787892 29 100.0 32 ............................. CCGGCGTTTACACCGAGCTGGAAGCGAGGAGC 2787831 29 100.0 32 ............................. CGCCAGGTTCCGCTATCCAGCGTGGCCATCGC 2787770 29 100.0 32 ............................. GCATATGAATGCTCGTTCTGTTGTAATTGACA 2787709 29 100.0 32 ............................. TACACCCCAGTCCCGCCGCTGGAAAACCTTCA 2787648 29 100.0 32 ............................. GCCATGGTGCGCGAGCTGCAGATTGCCGCAAA 2787587 29 100.0 32 ............................. CGAAACACGCTTGCATGCGCTTATGCCTTTGT 2787526 29 100.0 32 ............................. TTGTCGCGGATATGCAGAGCCGTTACGAAATA 2787465 29 100.0 32 ............................. CTGCAGCGCGGCGTGGCGGAATTCTCCATCAC 2787404 29 100.0 32 ............................. TATCGGCACCTGTTTGACCCACGACAAGTGGG 2787343 29 100.0 32 ............................. ATTGGCGATGTCCTGGCCCGCTAAGGCGGCAT 2787282 29 100.0 32 ............................. GTGTTATGCGCGCGCCGAAGGTAAACCAACGC 2787221 29 100.0 32 ............................. CCGTGCCGGCCGCTGGAGCCGGTAACGGTGGA 2787160 29 100.0 32 ............................. CCGTGCCGGCCGCTGGAGCCGGTAACGGTGGA 2787099 29 100.0 32 ............................. GCGCGCGCGACAAACCGCCTCTCCTCAGCCAA 2787038 29 100.0 32 ............................. CCGATGGGCGAGACCAAGCGCGGAGTATTGCG 2786977 29 100.0 33 ............................. AGTGGCACCATTTGTGCCTACCTGCTATCACCG 2786915 29 93.1 32 ............CC............... CCTTGCTTCGCATGCAGTTCTGGGTGGTACAA 2786854 29 100.0 32 ............................. TCGGCTGGCACAAAACGCAGACCAGAGAGGAG 2786793 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 39 29 99.7 32 GTGTTCCCCACATGCGTGGGGATGAACCG # Left flank : CCTGCTGGCGCAATGGCTGTACAACGTGCCGCCGCTGTTCCACCTGTCCGCCGCCAGCCTCAAGGCCCGCCTGCCGCAGCTGCAATGCGCCGACCGCGCCTTCCGCCCCTTGCACGAGCAACTGGCCACCCAGGCGCTCACCGGCTTTGCCTGGTTGAACGCCGAGCATACGCTGCAGCAAACCCGTTTCGCCGACGGCAGCCGGCTTACCGCCAACTTCGGCCCCGCGCTGGTCCGTTACGATAAGCAAACCCTGCCGCCGCAAAGCCGGCTGGCCGAGCTGGCCGGCCAGCCGCCCAGGCTGCTGCCAGTGGCGGATTGCGTCGGCAAGTAAGCGGCGGCGATAATGCCGATGTCGTTTTGCCGGCCGTGGCGCGGCGGTTTCCCATGGCCGGCGAGCGGCATTGCCGAGCGATCTAGATGGTGATTTTTTGAGCGGAAAAATCGGTAGATTTTTGGGGTGGGTTTTTGTCTTTAAAAATCAGCATCTTGAAATTGGT # Right flank : TTCATCTACTGGCAGTGATACGGGATTTCAAAAATATGGGGATTGAAGCGTGGGCGATGGTTGTGGGAATCGTCAGGCCAAACGGCAGGTACAACTCTCGACCCTGCAAGTCGCTGCCTAGAGAAGTCCCATGGCATGAGTTATGTCAATATTCTTATTGATCAAAATGACAATGTGCTTTTGGGCTGATAGCCTGCGCGCTTGGGTTGGTTCCAGTTGGCAGATCGGTTTTCACTGGGAGAGGCGATGCAGACAGAGTTGGACGGCAAAAAAGAGGTTCATGAACCCTCCAGTGTAACCGGACTAAGTTTTGATGATCTGCACCCCGCGGTCCGACAGCTATGGGCCAAAAGCGGTGACCCGATTGGCCATGGCCTGTTATGTCACATGCTGGACGTGGCTGCGGTGACCAGAGCTTTGCTCGACTACTGCGGGATTTCGGCCAAGGCGTTGGCGCTGCGTTTCGGCCTGCCCGAATGCGCGGTGTTTCCATGGTTGGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACATGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACATGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 2798431-2796387 **** Predicted by CRISPRDetect 2.4 *** >NZ_UIGR01000001.1 Chromobacterium violaceum strain NCTC8684, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2798430 29 100.0 32 ............................. CATCGGCACCGGCTCACCGAATGAAAACGCCA 2798369 29 100.0 32 ............................. AGCGCCAGGCGCGGGAGGTGGCTGCGCGCAAT 2798308 29 100.0 32 ............................. CCGGCTCGTCGCCTCGTGCCTCAAATCGTGAA 2798247 29 100.0 32 ............................. CCGGCCAGCGCGCTGGTGCTGTCGTCCTCCAG 2798186 29 100.0 32 ............................. CCGGCGTATACCTGGGAACAGGCTTGCGTACG 2798125 29 100.0 32 ............................. GCGGTTATCTGGGACGAATGCCACCACATCGG 2798064 29 100.0 32 ............................. CCCGCGGCGGCTACGCTGGCGGCGCGGCCAAG 2798003 29 100.0 32 ............................. CCCACTCGAACCTGGCGTGTGGCTGATACCAG 2797942 29 100.0 32 ............................. CGACGGCCGGTCATCATCCCGTCGGGCATCCC 2797881 29 100.0 32 ............................. GGATTGAAGGAAACGAACCTTACCAACTTTTA 2797820 29 96.6 32 ............................A GATGCGGCAGAATTGGGAATTGCTACGTCAGC 2797759 29 100.0 32 ............................. AAGGAAAAGACAACAAGGCGTGTTGACAAGCG 2797698 29 100.0 32 ............................. GAATAGTAAATGTCTTTCGTCATTGTTGCAAC 2797637 29 100.0 32 ............................. GCGGGGGCGCTGGCCGTGGCAGCCGGAGCCGC 2797576 29 100.0 32 ............................. CAAACGCTGCTGGAATCGTTCCCGCCGCATCA 2797515 29 100.0 33 ............................. CACGTTATAAACGTCATCAATGCCACGAAACTT 2797453 29 100.0 32 ............................. CCGCCAATCCCCTGAGTTTGCGGAGTGAGATT 2797392 29 100.0 32 ............................. AATCAGAACAATCAACTCCATTGCAAATTGCC 2797331 29 100.0 32 ............................. CCGCAGCAGGCCGCCGCCGGGCGTGTTTGGAG 2797270 29 100.0 32 ............................. CCGCAGCAGGCCGCCGCCGGGCGTGTTTGGAG 2797209 29 100.0 32 ............................. AAAAAGGGCGCACGCATCAATCTTGAACACTA 2797148 29 100.0 32 ............................. GCGGAGCTGGAGTCTATGACCGTTCGCTTGCA 2797087 29 100.0 32 ............................. CCTGGGAGCAATTTCCACCCTGATATTCCAGA 2797026 29 100.0 32 ............................. GCCAAGCTGGAGCGCGGCGGCCTGCCGCTGCG 2796965 29 100.0 32 ............................. GTGGCGCAGTGGCCGGTGGTGCGCCCGTTCCA 2796904 29 100.0 32 ............................. CAGGATTCGACCTTTTTGCGTGTCAGCTCGGC 2796843 29 100.0 32 ............................. TAGCAGGCAGTAACCCCCCCTACGGGCATGGC 2796782 29 100.0 32 ............................. ATGGCTGGAGTCTGAGGTGAGCGAATGGATCA 2796721 29 100.0 32 ............................. CATGGCATCAAGCTGAAGGATACCGTTCACAA 2796660 29 100.0 32 ............................. TAACCATACCTTAGGTGCAATGATGATTTGCA 2796599 29 100.0 32 ............................. GCGAGGCTGACCCGCTGATGCAGTACATCCGC 2796538 29 100.0 33 ............................. TACTGAAAGGTAAGAAAAAATGAGCCGCAAATG 2796476 29 93.1 32 .........................G..A AAGCCAGTGCCTCAAGGCTTGAGGGTTCGAGA 2796415 29 69.0 0 A.A.........GTT..........GTGA | ========== ====== ====== ====== ============================= ================================= ================== 34 29 98.8 32 GTGTTCCCCACGCACGTGGGGATGAACCG # Left flank : TGCCCACGCCGGGCGGGCCCCACAATATCATCGAGTGCGGCTTGCCGGACGCCACCGCCAGGCTCAGCGGCTTGCCCGGGCCAATCAGGTGCTGCTGGCCGATCACCTGGTCGAGCGCTTGCGGGCGCAAGGCCTCGGCCAGCGGTTTTTGCGGTTCGACGGAAAAAAGATCGGACATGGCGCGATTTCGGCGGGATGGGGCGGAGAAACAGTATACCAGTTGGGGACACGCATGAAAAAAGTGGCAGTCAGGCGCTTTTTGCTTGCATGTCGATGGAATGAAGGTACGCTATGGCTGCTGGCCTAGCCTAAGCCTTGCTGTTGCGGAAGCTTGGCGTTCAGCATCAGAGGCGAGCGGTGTCGGACCCTTGTGCAAGGGACGATTTGCCAAGGCCTGGCGGGGTTTGTCGTGCTGATTTGAACGCCGCTTCATGGCTGGTAAAATCGGTAGAATTTCAGAGCGGGTTTTTGTCTTTAAAAATCAGCAGCTTGAAAATGGT # Right flank : CGGGGGACGGCTGGAGTGGTGTCGCGGCGCTGCCAGTCCGGCCGCGTCCGGCAACAAAAAAGCGCCCCGTGGGGCGCTTTTTTTCTGCACAACGAGTAAGAAGGCTTAGGCGCGCTTCTTGAATTCGTTGGTGCGGGTGTCGATTTCGATCTTTTCGCCGGTGTTGACGAAGGCCGGAACCTGAACTTCGAAGGTGGTGCCTACCAGGCGGGCCGGCTTCAGCACTTTGCCCGAGGTGTCGCCGCGCACGGCCGGCTCGGTGTATTCCACTTCGCGGATCACGGTGGTCGGCAGTTCCACGGAGATGGCCTTGCCGTCGTAGAAGGTTACCTGGCACACGTCTTCCATGCCGTCGACGATGTAGTTGATGGTGTCGCCCAGGTTGTCGGCTTCCACTTCGTACTGGTTGAATTCGGTGTCCATGAACACGTACATCGGGTCGGCGAAGTAGGAGTAGGTGCAGTCCTTGCGATCCAGCACCACTACGTCGAACTTGTCGT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGCACGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGCCCGTGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //