Array 1 44850-47075 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJJB01000004.1 Campylobacter lanienae strain P0006 .11822_4_12.4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 44850 37 100.0 34 ..................................... TATTAATCTTCCTTTTAATTTAACTATCACGCTT 44921 37 100.0 38 ..................................... GCGAAAATATATCAAGAATAATTATGAGAGAATAAAGC 44996 37 100.0 34 ..................................... TGTATCACTCTCATATGCTCTATTAGCATATTAA 45067 37 100.0 37 ..................................... GGCTGGAGTTGGCTCTAAGATTATTGAAAGAATAGTT 45141 37 100.0 36 ..................................... TTATAAACAGGGTGATAATGTTACCATTCTCAATGC 45214 37 100.0 36 ..................................... TTACCGATGCTTTAGGTATAATGCCACGCCAACCGA 45287 37 100.0 36 ..................................... TATTTAAAAGCTCTCACTTCGCTATCCACCACCTTT 45360 37 100.0 36 ..................................... ATCACTTCGGTATTCTGCTTTGTCTATAGGGAATTG 45433 37 100.0 37 ..................................... TTATGAAGCGTTGATTTTGGGGTTTTTAATTGACAAG 45507 37 100.0 37 ..................................... ACTTAGGTGGCGTGAGTGTAGATATTAGCGTTAATTT 45581 37 100.0 35 ..................................... TTAAAATAAGCATAATTGTTGCTATCACTTTCGCT 45653 37 100.0 36 ..................................... AGGGCGTTCAAGTTGATTAATTTCTAATAATTGCGA 45726 37 100.0 35 ..................................... CGCAACAAAATATCAAATACAAGCAATTACCGAAA 45798 37 100.0 36 ..................................... TATACCACTTGCCTTTTTTTCTATGATGATATTCTG 45871 37 100.0 36 ..................................... CAAATTTAAAGTCTATTTTATCATAGTAGCCAAATA 45944 37 100.0 36 ..................................... TTGATGGGGAAGAATGGAATTGGCGTGATGGCGAAT 46017 37 100.0 37 ..................................... TAAATTGTGCTCTATCAATATAAAGCCCACCTTCTTC 46091 37 100.0 34 ..................................... TAATAAACAAAAGAAAGAAGCCGAGAGCAAAAAA 46162 37 100.0 34 ..................................... GAATGCCTTAAATAATTTTGCGGATACCGCTAAA 46233 37 100.0 39 ..................................... TTGGTAAAGCATTTAACACTATGACGTGGCAAGATATAA 46309 37 100.0 36 ..................................... CTAAAATTAAGTGGACAGCTTTATGCTATATTTTGC 46382 37 100.0 36 ..................................... TTGAAGTTGTGCTATCAATTTATCTAAGCCACTTAA 46455 37 100.0 38 ..................................... TCTACTAGCTCGTTTGTCTCTATAGCTTCAATTAGCTT 46530 37 100.0 34 ..................................... TGAAATTATTAGCTAGATATAAAACTGGTCAAGA 46601 37 100.0 38 ..................................... CTTAAAATAGAATTTGATATTAATAATGCTGTTTATGG 46676 37 100.0 34 ..................................... TTTATGTCGCTGAAGTTGCTAGAGATAATGAATA 46747 37 100.0 37 ..................................... TGATAGGGCTTTCACATTATCAAAGAGCTAAAATATT 46821 37 100.0 35 ..................................... TAGTTTTAACACAAAAATAGCTAAAAAATTGGGAA 46893 37 100.0 38 ..................................... CTAAATAGTGGCGTAACTCAAGCTTATGAAGGCTATAA 46968 37 100.0 34 ..................................... AAATTACGCTGGGATTTTATTTGGAAATATTTGG 47039 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 31 37 100.0 36 GTTTCAAACCAAGTTGGATTGTGGTATAATTTGCAAC # Left flank : GCGTTATAAGAGAGAAAACTTCTCTTACTCTAAATCTAAAATAAGAGAAAATGAAGTTAAAGATAAAGAGATTTATTTGGGGAGATGATTAATAGCAATAATACATTATCATAATAATTATTTATAAATCTAAAAATTTTTTAAATTTTTGATATTTTTAAATAATTCTATTATTTATAGTTTGAGTTAATATTTCCATTTTACTCTCCTAAAAATTATTTAAAAACTTCTCTACATTATCACGCTCAAAATATTTATAATATTGTGTAGAGATACGCATTAAAATCATCTCTCTCTCTTAAACTTATCAGCTCTGGCTCATCACTTTGATAAATTTTATATAACGAAGCATTTACTAAATCTATATCATCAAAATTAGCCGCTATACCTAATTCTGGGACAATCTCATCATAAAATAGCTCTATTTGCTCCCCTTTTTGTAAGCACAATTCTAAAAGCATTTATAAAGTCTTGAGTGTTTGTAAAATTTTTGTATTTGT # Right flank : CTGCGCACAAAATGCCCTGTTTTAGGGATTTTGTGCTTAGTTAATTGTAAAATTTTTTCCACTTAGAAAAAAATCGCAAAAAGTGGCGAATTTGTGGAAAAATATGTTATAATCCAAGCGCAAATTATACCATAATCTAGCTTATAGCGTTTGAAATCACCACAAGGTGTTTTCATATCGGGGCAACTGTCTTTGACACCCCCGGTTATTCTCTATCATCACAATAATTTTTAAACTCACATTGCGCACAAGCTGTAATGCTAGCTGAGCTTTGGGGGAAATATCCTTTTTCTAATAGATCTTGAATTTGCGTTAGTGTTTTATCAAAATAAGCTAAATCCTCTTTATAAATTTCAAAGATTTTAAATTTTAGATTATTTGAGTAACATAAAATCACCCTATGAAAAGGCTTTTTAAAATATTTGCTAGCAAGTTTAGAATATGCTATAAGCTGCATTTTTGCGCCCTTGCTTAAAATTGGCTTTGATTGGTTTTTAAAC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAAACCAAGTTGGATTGTGGTATAATTTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.90,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA //