Array 1 14754-16882 **** Predicted by CRISPRDetect 2.4 *** >NZ_ORYJ01000284.1 Xanthomonas fragariae strain GBBC 2087 isolate GBBC 2087, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 14754 28 100.0 32 ............................ AGACGGTACAACTGCATACGCTAGAGGTATAG 14814 28 100.0 33 ............................ GTCATCGTGACAACCGAATACCGTGGTGTCTTC 14875 28 100.0 32 ............................ TTACGGTCATGTCCTGGATATGGTGTCCAGGA 14935 28 100.0 32 ............................ TTTCAGATCCCTCGCCTGGGTGGCCTACTCGT 14995 28 100.0 32 ............................ GTCCATGCGGCCGGCAGCCAACAGGCTGCGAA 15055 28 100.0 32 ............................ TATGTCGCTGAGGGGTGATCCATACCTAACCC 15115 28 100.0 32 ............................ CTGGCTGCAACCGCTACTCCGTAATAACTAGG 15175 28 100.0 32 ............................ ACCAGGTCCCGGCCCTTCTGGGAGTTCACTGC 15235 28 100.0 32 ............................ AATGAGCAATAACTTTTGCGCTAGTGTTCATC 15295 28 100.0 32 ............................ ACATTATCTTTTCCGCGAATCAAAAGCTTAAT 15355 28 100.0 32 ............................ TTCCGGGGCAATCCCTTTACGCCTTCTTGGCC 15415 28 100.0 32 ............................ ACCAAACGAACTGGTCCAGGCTAGGATCCGTT 15475 28 100.0 32 ............................ TTCTGGGACCACACAACCTCGCCTGCGTGCAC 15535 28 100.0 32 ............................ GTTCAGGGCAGGCGAAAGGTCTCAGCGCTGCA 15595 28 100.0 32 ............................ GCATCGACCCAATGGCCGCCCTTGCCAGGCTC 15655 28 100.0 32 ............................ TGCAGATGCGCGCGACGAATATCGGACGTGTC 15715 28 100.0 32 ............................ AAACATGCGGGGATCAGCACGGCCATCGGTTC 15775 28 100.0 32 ............................ CGTAGCCGGGAACTCAGCCAACTGTGCTTGCA 15835 28 100.0 32 ............................ GATTTCACTGATTGATCTGGACACTGTGCAGC 15895 28 100.0 32 ............................ TCGAAGTAGGCATAAAGCACGTTGGGCAGCCG 15955 28 100.0 32 ............................ CAGACAAGCCAGACGCCGACCCACTGATAGTC 16015 28 100.0 32 ............................ CGTCGTTTCGCGTCGTCCACCGCAGCCAAGGT 16075 28 100.0 32 ............................ ACCAACGACGGGTGTCGCGCGCACCTGGGTAG 16135 28 100.0 32 ............................ ACCTACGAGCCCCAGCCGTATGCAGAGGTTTC 16195 28 100.0 32 ............................ CATTAGGCTGCACAGTGTCCAGATCAATCAGT 16255 28 100.0 32 ............................ AGCCGCACCCTTGCAGACTGTACTCTCTGCAT 16315 28 100.0 32 ............................ TCCACGTCCTCTTGAACAACATGTTCAGGGAG 16375 28 100.0 32 ............................ TGCAGCAGGGGGAGGAACTTCCGTATCAAGAC 16435 28 100.0 32 ............................ TGTAGGAGCAGACGGGGACAATACGCAAGCAG 16495 28 100.0 32 ............................ TTTGCGCCACACCGAAACCGAATTCCGCGACA 16555 28 100.0 32 ............................ TAAGCAGCGCGTTAAGAATACATTCGTGACCT 16615 28 100.0 32 ............................ TAGATGCCCTGATTGCAGAAGTCAGGACCTCT 16675 28 100.0 32 ............................ TCTATGGGGAAATCATTTTCGAAAAGTACATC 16735 28 100.0 32 ............................ TCCCAGGGCAGTCGGTGTCGCACCTTGCTTCG 16795 28 100.0 32 ............................ TTAAACCAAAACTCATGCCAGTCGTAGCGACT 16855 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 36 28 100.0 32 GTTCACTGCCGCGTAGGCAGCTCAGAAA # Left flank : TTGCAGATGTTGATGGCGAGACCCTGGCTGCACGGGATGCTCGATCACCTGGCGGTATCGGCCATTCTCGCTGCCCCTGCCGACACCCAACATCGGCACGTCACCAGGGTGCAGGCCAAGAGCAGTCCCTCGCGCCTGCGCCGTCGTGCCATGCGCCGTCATGGGATCGATGCAGAGACAGCCGCCCAACGCATCCCGGATGCGGCAGCCGAACAGCTGCCACTGCCGTTCGTCGTACTGGGCAGCCGCAGCACGGGACAGGCGTCATTCCCGCTGTTCATCCGTCACGGCCCCCTGCTATCGGAGCCGACGAACGGCAGCTTCAACAGCTATGGCCTGAGCCAGGAAGCGACCGTGCCCTGGTTTTGACCCTTTTTCCCGGACAGAACAAAGGCTGCTTTAGAATCAACCACTTGGCAGGCACCTTGTTTCAAAGGGTGCCTGCCCTGTTTTGTCGGTATTTCTTTTATTTATCAATGGATTGATGAAGATCTGATCTT # Right flank : AATTCAAGGATGGCCATACGGGTTGGATTGACGTTTGATACGCCCAGGGTTCCGTAGACCCTCAAGACCCTCGTTGCGCGTAGCGCCGTTCAAACTCTACAGGGGACAGGTCGCCAGTTGAACCGTGGCGGCGGTTGGGGTTGTAGAACATCTCGATGTAGTCGAATACCTCGGCGCGAGCGGCGTCCTTGGTGGAATAGGTCCGCCGCCTGATCCGCTCGCGTTTGAGCAGGCCGAAGAAGCTCTCCACGGGTGCGTTGTCGTGGCAGTTGCCACGCCGACTCATGCTGCACACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //