Array 1 122300-123920 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP024685.1 Latilactobacillus curvatus strain WDN19 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 122300 36 100.0 30 .................................... TGCTGTTGTTTATCAGTAACAACGCCGTCA 122366 36 100.0 30 .................................... CCGATGGCGGTGACACATTGGACTCGCTTA 122432 36 100.0 30 .................................... TTGCAATAATTTCAGTTCCCCAATGCTCTA 122498 36 100.0 30 .................................... CTCTGCAAATGAAAGCTAAGTTGGCAGATG 122564 36 100.0 30 .................................... ACCACGATTGTGACACTTGCCCGCGTTGCC 122630 36 100.0 30 .................................... TTGTACTTTCTAAACCGCTTGTATGCTTGG 122696 36 100.0 30 .................................... ATCATCGACCCCTTCACCTAGCGTACTCAT 122762 36 100.0 30 .................................... ACATGAGGGAATCAATAGTAAGCGGCATGA 122828 36 100.0 30 .................................... GCGCACTAGGGCGCAGTAGTCTTCATGTTA 122894 36 100.0 30 .................................... AAGTTATCAGCGGTGTTAAAGACAAGTTAG 122960 36 100.0 30 .................................... TCTTGTTGGGCGTAGTCGAATGTTTTATCA 123026 36 100.0 30 .................................... TTTGTTTCGTCAACGTCCATAGCGTCCAAT 123092 36 100.0 30 .................................... AAAAAGTAGGCAATAAGTGGGTTGTAGTAT 123158 36 100.0 30 .................................... ATAAGCGTATTATAATAGACAAGGGCAAAC 123224 36 100.0 30 .................................... AAGGTTAGTCAATTTTGATTTGAGGTGTGC 123290 36 100.0 30 .................................... TTAATAGATTTGTTGAACAAGCGCTCGGCG 123356 36 100.0 30 .................................... GTTTAGTTGGATTAAATTCCAATGATGATC 123422 36 100.0 30 .................................... CCCACTAATGAACCCTTGTGAGTAAAGTTA 123488 36 100.0 30 .................................... GTGTTCTAAACTGGTCGATTTCGACCATGT 123554 36 100.0 30 .................................... ATCTATCGGTCAATCCAGAAATCAGTTAGC 123620 36 100.0 30 .................................... TTTACATCATGGGTCTGATTTAACAGCTAC 123686 36 100.0 30 .................................... TGTGGGATTGAATCATAAGGAGTTCTTTGG 123752 36 100.0 30 .................................... TTGAGGAAACCGACGGCGCGCGGTTCATCG 123818 36 100.0 30 .................................... CCATCAGAACGATTAGCGATAATACCCACT 123884 36 86.1 0 .............................T..TTTA | T [123911] ========== ====== ====== ====== ==================================== ============================== ================== 25 36 99.4 30 GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC # Left flank : GCAATTAATTTGAATCATCTATTTCAAAATCGGTTGATTAAAAAATTCGCCGCCGACTTAACGGATCAGCAGCGCCAGAAATTAACTCAGTTAGATAGTGAGATTCGTTCAACGATTTTGGATGCGGCCTTTATGTATGAATTGACCTTAGATGTCAATCAGGAATGGGATCTTCAAAGAATGATTAAGTTCTATAATTTACAATTTTCTACTGTCGTCCAACATGACCCATATGGTATAATCGAGAGTATAGTACAGACAGCAGTAGAGTTAAATGAATCAAAGATAATCACGTTGATCAACGTTTCGCACTATCTCAGTATCAACCAATTTAATGAATTGGTGAGGTTGGTGGCGACATTGAATGTGAAACTCTTTCTCATTGAATTTTCAGAAGAGGTTAAATCTGATCAGTACCAGAAATGTTGTTATTATCACATCGATAATGATTATGTCGAATGGCGCTATGAATAAAATGAAATTCTGATGAAAAAACGACG # Right flank : ACCTATTTCCCCAGGAAAGCTATTGATAAAGATCACGTCGCCTGCGTGGTCTTTTTTCATGCATTCAAGCATTGAAAACAGTTCTCAATTAGCATAGAATTAAGAGCGTATAATAATTGCTAGAATGCGATTCTTGGAGGGTCATCTATGTCTAAATTAGAGATTATCGATTTGCACGTCGGCATCGACGGTAAGGAAATTTTAAAAGGTGTTAACCTGGAAATGAACACGGGTGAAATTCACGCGATCATGGGACCTAACGGGACTGGGAAGTCGACGCTTTCGGAAACGATTATGGGCAATCCCAAGTATGAGGTACTACAAGGTCAGATCAAACTAGATGGCCAAAATATTTTAGAAATGCCGGTTGATGAACGCGCCCGTGCGGGGTTATTTTTGGCGATGCAATATCCTGCTGAAATTCAAGGGGTAACGAACGCTGAATTCATGCGTGCGGCGATTAATGCACGTCGGGCTGAAGATGATCAGATTTCAGTGAT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 2 516307-516095 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP024685.1 Latilactobacillus curvatus strain WDN19 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 516306 29 100.0 32 ............................. CAAACGACGACAATCATTACCAACCTCGGTGA 516245 29 96.6 32 ............................C AACTTGGAGTTCATGGTCAACAATTGCTGATA 516184 29 100.0 32 ............................. TGCTGGATCATATTAGGTGTTAAGCGAACGCT 516123 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 99.2 32 GTGCTCCCCATATACATGGGGATGATTCT # Left flank : TACTAAAGCAGAAATTATTTCAATTGGAGCAGCCAAGATAATGCCTGACGGACAATTACTGCAATTTGAAAAATTAATTCGAAGTGTGGATTCAGTACCATCCAAAATTACTGAACTTACCGGAATTACTTCAGAACAGTTGCAAAAACAGGGTGTTGAGCTTTCATTAGGATTAGAGGCATTGTCTGATTTTGTTAAGGATTCAGTCATCATCGGTTATAATCTTGAATTTGATGAAAGGTTTTTAACGGAAGCATTGCGGAAAGTTGGAAAAACCGAATTTACTAACTCTACCCACGATCTTATGCCAATAGTAAAAACAACTCAGGAGTTTTTAGATAACTATCGTTTAACGACTGTCTTGGAAGTATATCAGATAGAGAATTTAGATCCACATCATGCATTATCTGATGCTCAAGCTACGTTGTCTTTAGCAGAGAAGTTAATAAAAAACGGCAACCTTGTAATTTGAAAATGCCTATGTAAAGGCTTTTTTTAGT # Right flank : GGTACAGACGGTGGAACTTGGATGAACTACATTGTTGGTACCACTGATACCACAAAGAGACATTATGTGGCAACCATCTCGCTGGATGGGTTTTCGCAGCAAGGTGTTTATATCCGCCTTGATAATATTCCTTCGACATCCACTATTACATTTTCAAATATGAAACTGCAATTAGGTTTAAATGTGGTGGTCTCCAATCTTTTTCAAGCCGTGGATGGTATGCGACTTGATATCTCTAAGAAAATTGAGCAGAAGGATCTCAACGGATATGCAACCCAAACGTGGACACTGGATCAGATTAAGTTAATTTCTGATTCAATTGCTTCGTTGAAAACAAAAATTGACAATCTTAGTCAATGAAAACAATAAGAAGTAACATCCACAGCTATAACTGATGGGTCAAACCATCACAGCAACAGACGATACAGGTAAGACAGTAAAACTAAAGATTACAGGAATCAGCTAAAAAGCTAGTTCCTTTTTTTTAGTACAAAAATTTA # Questionable array : NO Score: 2.82 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCATATACATGGGGATGATTCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.30,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 3 527286-526039 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP024685.1 Latilactobacillus curvatus strain WDN19 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 527285 28 100.0 33 ............................ CGTCCCAACCGCTGTGCCTGATGACGTATATTT 527224 28 100.0 33 ............................ TAACAGCAGCGGATCAAGAGAGAACCACGTATT 527163 28 100.0 33 ............................ CGTATTCTGTGAAGGGTTTCTGATCACCGCGAA 527102 28 100.0 33 ............................ CTATTGCCCGATTTGCGGCAGGAAGCTGGGTGA 527041 28 100.0 33 ............................ TAATGGATCGTTGTGTCGCACTGTCCATGTTAG 526980 28 100.0 33 ............................ TAAGACGCTCGCATCAATTTTAAAAGAAATAGA 526919 28 100.0 33 ............................ TAGTCAAGTCATAGCCAGTTGGTTATGGCTTTT 526858 28 100.0 33 ............................ TGATGGTGCACCGGCAGAATCGCATTACGAATT 526797 28 100.0 33 ............................ CTATGCTATGGATCACAATATTAACTTGATGAT 526736 28 100.0 33 ............................ TGGCTATAGAACAACATTCACAATGCCAGAAAT 526675 28 100.0 33 ............................ TCCAATCTTGGAAGTAATCGGGAAAAGAAATAC 526614 28 100.0 32 ............................ TTGAATGGCTTACTTTTGTTTTTCCGCATTTT 526554 28 100.0 33 ............................ TAATCTCGGTTGGTGTCACTTCGTAATGTGCCG G [526553] 526492 28 100.0 33 ............................ TGCTGACATATCAAGCTATACAGACGTAATCAA 526431 28 100.0 33 ............................ TTGACGTGCCCATTCTAGCAAGCCCGGAAACAA 526370 28 100.0 33 ............................ TTAAACTAGATTATATTAGTGCATCGGCACTAC 526309 28 100.0 33 ............................ CTAACTATAGCTATACCTAAAATATTTTTCATG 526248 28 100.0 33 ............................ TCTAAAGCCGATGCTAGGTTAGAGAAGTGGCTC 526187 28 100.0 33 ............................ TGTAAGTGAAGTGGTATAATTGAGTAAAATAGT 526126 28 100.0 33 ............................ TATTCATCGCAAAAATTCAATAATGCTTTTAAG 526065 27 75.0 0 ..GT.......A..C.....-...G..T | ========== ====== ====== ====== ============================ ================================= ================== 21 28 98.8 33 GTACTCCCCATGTATATGGGGATGATTC # Left flank : AAGTCAAATTTGTTCGTACTTTTATGTCCGGATTCTTGACATAGGAGCCATAAGTCTCTGCAAGTGTGAGACGAGATTAGCAGCAATTATACAGCCACGGTGGTCGTTTATACTTGATACAAGCACAGGCTGAATCGGTTGAGGATGCTCAAACAAAAGTTTATCAAGAACTTGAAAAAATGGATCAAACAAATATTTTTTATCGACGAGATATTGGTAAGAACTCCATTTAGTTCAAAAAGGTAGAAGTAAGATTTCGTTTGAAATATTACTTCTACCTTTTTATTTGGATCGACATCTTAGAACTTTGAGTTTTTGAAAAATTTATAGACATAGATATTTAGAGTATTTTTTATTAGTCATTGAAACTATTGAAAATAGCGTTGCATAGAACAGGAAAGAAAGTTATGATTTAAGAAATTGGTAATCTTATTGGACCAGTTAATAAAAATAAGTGGTTTTCTAATTTTAAAATGTTGATCTAACAGTCTTTTCTTAGT # Right flank : TAATTAGGGCCAAGTGCTCTTTTTTATCATAATTTTTTCAGAAGTGAAATTGTACCGTAAATAGATTTAGTCATGAGCTAATTTGTAATGAGGTTAGATATTAGAAAGTAAATTTTCATTTCTTACAAGTCTAACTATATTAATAGTGGCATAATAAAGATAACGATTACATTGCCGTTTGCGTAGATAAATTTGAAAGATAATCTCTCTAAAAAGGGGAAATATTAAATGTCAGTAAAATTAACGAGTAGAGAAACTAGTTTATGGGCAAAAAAACATGTAGATGATGGGGAAATGTTGTGGCTTCCATTAGTTGCCCACTTAGTAGATTGCAGTCATGTGATGAATTGGCTTTTTTATCATTGGTTAAATGCCGGTCAAAGAGAATTGTTAACTCAGTCGGTTTCTGAAGAAGACATGCAAAAGCTAATTAAATTTTTGGGATTCTTTCATGATATTGGGAAAGCCACACCAGCTTTTCAAACAAAAAAATCTTACGA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACTCCCCATGTATATGGGGATGATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.30,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //