Array 1 127211-128360 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOBA01000010.1 Phocaeicola vulgatus strain NLAE-zl-G202, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 127211 33 97.0 34 ................................T CTAGTAAGGACTATTCAGATCAAATGGCTGCCCA 127278 33 97.0 31 ................................T CAGGCTCAACAGATATTGAATAAATATCTTG 127342 33 100.0 33 ................................. TATTTCATTTGGTGATCGTAATCGTCGTCAATT 127408 33 97.0 33 ................................C TTAGTATGGATGCTATTCGTAGTTTTATCACTA 127474 33 97.0 33 ................................T GCCGAAACGAATGGTATTCGTATTAGTAATAGG 127540 33 97.0 33 ................................T GTTCCTGAAAGAAAACAATACGCCTACATAAAT 127606 33 97.0 33 ................................C TTCGGCGATAGCCGAGTGGGCACGGTCATAAAT 127672 33 97.0 32 ................................C TATAACGCGCGTATTGTAGAAAATACTCCATG 127737 33 97.0 33 ................................C TGAGCCAGCATCTCTCATAGCCCTCCTTCCAGA 127803 33 100.0 32 ................................. TGTACAAAGGGATAGTAGAAAATAGAAGTTAT 127868 33 100.0 33 ................................. CAATATTATTGTATTAGAGTAAAAGGAGATAGT 127934 33 97.0 33 ................................C GTAATGGACAAAGGTACTGTTATTACGGAAAAA 128000 33 100.0 32 ................................. CTTATAATCTTACATTTGTTGTCTTTGCAATA 128065 33 97.0 33 ................................G ATTATGCACCCTCGTCAAACGGGGCAAGGGATT 128131 33 100.0 31 ................................. TATTCTGAACACATTGCAAATGTACAAAAAG 128195 33 97.0 32 ................................T GGGAAGCTTGCGCCGGATACATTATGGACGTT 128260 33 100.0 33 ................................. ATGACGAGGTGAATACGTGTATAGACAACCATA 128326 33 93.9 0 ....................A.........G.. | TA [128345] ========== ====== ====== ====== ================================= ================================== ================== 18 33 97.8 33 GTCACACCCTGCGTGGGTGTGTGGATTGAAACA # Left flank : ATATTGACGATTATCCGGTATTTCTTATAAAATGATTTTTAATTATGTACATTCTTGTGACTTACGATGTGGATACTACAAGCAAAGAGGGGGCTCGCCGTTTACGATGTGTGGCCAAGGCTTGTCTGGATTATGGACAGAGGGTGCAGAACTCAGTCTTTGAGTGTGTAGTGACGGAAGCGCAATATTCTCTTCTAAAAGGGAGAGTTAGGGATATTATTGATATGTCTCTTGATAGTGTTCGTTTTTATATTCTTAGTAAAAATGAGAATAAGAGGGTGGAAGTAATAGGTGTTGAAACGGCGTATAAACTTGAGGAGGCTCTTATAATATAATGCGAATGTGGTGTGTTACAAAAAAAGTAGTATCTTCGCATGTGTTAATAATCAGTAGATTAAATTATTTGTAGGGTATTTCTTTGTTATGAAGTTGAATAATAATGATGATTCGCATAACAGTGGATTAAATTTGCTGATTTATAATATGTTATTAGATATAGA # Right flank : ATTGTTCACTCGTTGGTCAAGTTTATGGAAGAATTGTAAGCATTCGGCCTCTTGTGTATTTCTCTTCAAGCTGTTATAAAATCAAAAGCCAAACGAAGTACGTTAGGCTTTTGACTTTGTTATGACTGGAAAAAACACGCACAATCCCGGATGCTTATCTTTTGTCTGTCTTCTTTTGTGGTTTCACCTAGGTGACAATACATTGGCATCTAAGTGGAGAGGCGTAGTCACCCAAGTGATACGCTTGCTTCACCTTGGTGAAACTATAAATTCAACTAAGCGTTCCAGAGTAAATATATTATATTTTTTACTATACTATTCCTTGTTGTTTATTTGTTATATTGTTGATTATTAATGTGTTATTGTCTGTTTGTGTCGATTGTTTTTTCTTATCTTTATAAGATATATTAAAACATAAACTAACATGGAAATTGGTATAATTGACCTTTGTAAACAAATAGAAGATCCTAGTATGAACCGCAAGAAAGTCCATAAAATGG # Questionable array : NO Score: 5.64 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.49, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCCTGCGTGGGTGTGTGGATTGAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.50,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //