Array 1 36231-34411 **** Predicted by CRISPRDetect 2.4 *** >NZ_NKYA01000038.1 Pseudomonas aeruginosa strain Pae110 NODE_38_length_44351_cov_19.4948, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 36230 30 100.0 35 .............................. CTGCAAACGGTTTGCCCATTCGGCAGACGCCACGT 36165 30 100.0 36 .............................. TCCCTGCGCCGGTCGGCGCCTGCAGCAGCACACGGT 36099 30 100.0 35 .............................. AGGCGGGCATATACGCGCCCAACTATCGGGCGGGT 36034 30 100.0 37 .............................. CCTACCAAACTCCGACACAGCTCTTGCTACCTATGGT 35967 30 100.0 37 .............................. ACGCGCTATCACCTGTTCGCCACCGCTACGTATCTGT 35900 30 100.0 36 .............................. TATTCCGGCTTGGTAACCTCCATGAACCCCTACCGT 35834 30 100.0 37 .............................. CACTACGCAGAGATGGTCCGGCGGTGGGCGAACAAGT 35767 30 100.0 37 .............................. AGCCCGATGGACCGGACAAGCCGAAGCGCTACCAGGT 35700 30 100.0 36 .............................. GCGCCTGCCTGCTCTACCGCAGGATGTTTCGGGCGT 35634 30 100.0 36 .............................. TCGAGCTGCAGGACATTGCCCAGGCTGTCGATGAGT 35568 30 100.0 38 .............................. ACGTGCACCACGGCGGCCATCTTGCCGACGTTGAAGGT 35500 30 100.0 36 .............................. CATGTCCTACTCCGACCCCAGGCATTGCCACAACGT 35434 30 100.0 38 .............................. GTGCTCGCATTCCTCGTCGCCGGCCACCCGCTGATGGT 35366 30 100.0 35 .............................. ACGGTATACGGATTCGCCGGATTCGTGCCTGAGGT 35301 30 100.0 37 .............................. TCCAGGGATCGGGCCGGCTGCGAGAATGAACAGGTGT 35234 30 100.0 36 .............................. GAAAAGAGATCGAGGCCGTCAACGCGGCTATCGAGT 35168 30 100.0 36 .............................. GCGCTCGCCAGGGTCGCGGCGTCGCCATCCGCACGT 35102 30 100.0 36 .............................. CCCGCCAATCGAATCACCAGCATCGCCCTGCTCCGT 35036 30 100.0 36 .............................. GAGCTGGTGGGGAAATCGATTGCTGGCGCCGCAGGT 34970 30 100.0 36 .............................. GTGCTCTGGGCTCACGACCTGACCATGGCCAGGCGT 34904 30 100.0 37 .............................. AAGAAGTACCGCGAGCAGTTGCTGGAAGAACAGACGT 34837 30 100.0 36 .............................. TCGCCAGCGCTGAGCATCAGCCCGCAGCGCCCCGGT 34771 30 100.0 36 .............................. TTGATCTTGTCGAGGATACGGTCCTGGTCCATGTGT 34705 30 100.0 37 .............................. ACGAACACGGTTATCACCGGCGACGGTAACAGCGTGT 34638 30 96.7 35 ...............T.............. TATCCGACCGTGGGGGCAACGCTGTCCAGATTGGT 34573 30 96.7 38 .......T...................... AGCCCTGGCCAGGTCGTAATGACCGCAGCCGGTGAGGT 34505 30 90.0 35 ...........T................CA ACTGCCGTTGTCGCGTGACGGCTATCAGGGAATGT 34440 30 83.3 0 .......TA.G............G.....G | ========== ====== ====== ====== ============================== ====================================== ================== 28 30 98.8 36 CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Left flank : CATTTCTGTGGAAGTGAGGTGGCGACATGATGGTTCTGGTCAGCTATGACGTGAGCACTCAAGATGCTGCAGGTGGCAAGCGCTTGCGCCGCCTGGCCAAGGCCTGCCGCGATTATGGTCAGCGAGTGCAATACTCGGTGTTCGAGATCGAGGTAGATAGCGCGCAGTGGACACTCCTTAAGCATCGTCTGTGCGACCTAATCAATCCGGAACAAGACAGCCTACGTTTCTACTACTTGGGCACGAACTGGCAACATCGTGTGGAGCATGTTGGGGCCAAGGTTGTACTCGACCTAAATGGCCCACTGATTCTTTAGCGTCGGCGCGAACCTAAAGCGACCGACCTAACCCTGAGGGGTTCGCAGCTCTCTAGCTGATTGATTTATCTACTCTTTTTTTGACGTTAGCAGTTTGATGGCGCGCGCCTTGCCTAAATAAGGCATGTTTCGCTGAAGTAAAAGGTTTTTTTCATGCTGATCAGTAAGTTATAAGTGGGCTGT # Right flank : ATGGATTTTTGGGAGTTTGTCCTGAAAAATTTTGTCTCGCCACTCTCTTCCCGGCTCAGAGCCTGGCCAGGAACTCTTGTGTCACAGTGTCGCGGCCCCAAGCCGAAAGAAAGACCAGGTTGCGCTGCTCGTCGCACACGCAGGCGTCGACGTACAGGTCTGGGCACTCTTCGATCTGGTAGAGCGGGGTGGGACTGGGCATAGGAACCTCTTGGAAGGAGGAGCCACGCCGCCCTCAAGGGGCGGTGAAGCCTCTCGGGGTGTGGTCCAACTGGTGCAGGGGAGCGTGGTGGCTACCGAACGCTCTTGGTGTGAGGGTCGAAGCTGAGCCCATCGGCTTGGTGCAGCGGCCCTTGGCCGATCAGGAAGACCTGGCAGAGGTACTGATCGCGTAGCGCGACAGCCGCTTCCGCCTGCTCCAAGGTCAGCGACAGCTCCTCGATGAACAGGTCGATGAGCTCGTCGTCGCCGGCGACGTCGTTGTTGGACAGTTGGTCCTC # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //