Array 1 6957-7210 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFNCY010000022.1 Vibrio crassostreae strain 35_P_149 1490200022, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 6957 28 100.0 32 ............................ ACAATTTGTAGAGCATCAGCATTCGAATTAAC 7017 28 100.0 32 ............................ ATCGATAAAGTGCGGATACTGTGCAATGAATT 7077 28 100.0 32 ............................ TCAGATAGCTTGCGAGGATGAGTAACTAGATA 7137 28 96.4 18 ...........................T AGGCCAGGAAGAAAGCAA 7183 28 67.9 0 CCT......T...C.A....T...T..T | ========== ====== ====== ====== ============================ ================================ ================== 5 28 92.9 29 GTGTCCTGCCGAATAGGCAGCTAAGAAA # Left flank : CTTTGATGGTAAATGAAGGTTTGTTTGAGATCTCCAGTGTTTGTGAGGTGCCTGACATTGCGGTTGAGGTGAGGTTTACCCGTAATCAAACGATTGGGAAAAGTTTTCTGGGCTCCAAGAAACGTCGAATCAAACGTAGCATGGCGAGAGCCGAACTATCTGGTGTTGAACCATCGTTACCAGCCACTAATGAAGAGCGAATCATCGATAGTTTTCATCGAATCCCAATCTCCAGCGGTTCATCAGGGGAAAGTTATATTTTGTTTGTACAAAAGGAGTTTGTTGGTGAGTGCGTTGCAGCAAACTTTAACAGCTATGGTTTAGCCACCAATCAAGAAAGAAAAGGCACAGTACCGGAGCTACGTGTTTGACCCTTTTTCTATAGCTCTTTTTTAGAGACCAAAAAAACAATGAGTTACAGATGCAAGAAGAAAAAGGGTATTTTGATGAATTGTGACTTTAAGCATGCAGAATCAGATGGTTAGAGACTATATTCTACA # Right flank : TCAAAACCATCATGTTTAGGCTTGATGGTTTTTTATTTTTAAAGTTGGTGAGAGCTTTATCTTGTTATACTGAACTTTAAATTGCTTCACACATAGGCTTGATATTGATGGCTAAAGTCATTCTTTTAAAAGGAGTTTTTAGAGAACATGCAAGCAGAGCATAACTTATTTAAGGTTGTAGTGATTGACTATCATGCAACTGGTGAAGGCCGGCATGTCTTTATCAAAACAGGTACAGAGGAGTCAGTCAAAAAAGATGTAGGAGACTGGCTCTATGAAGGTGCTGATGCATATACGGTAAAGCAATGGCTAGAACTTGATAAAGATTCAAGCTGTGATCAGTATAAAGGCTCAAATATAGAAACGCTTAAAACCTTTGCTCCTGTATTGTGGGACGCGATGAAAAATGGTCTCCCAATGACTGTTGATGCAGAGTTTCACTGGAATGAGAGTTGAAGAATTTATAGCACAGAAAAGCCTGAGGCGAGTCTATTGGCCAT # Questionable array : NO Score: 5.38 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:-0.32, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTCCTGCCGAATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCCCTGCCGAATAGGCAGCTTAGAAA with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //