Array 1 201890-201622 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAZRL010000001.1 Acinetobacter indicus strain AI30 NODE_1_length_238462_cov_184.741456, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 201889 27 82.1 32 A.A...C-.....C.............. ATTCCGCTCTGCTGGCTGGAAATACCTGTCTA G [201886] 201829 28 96.4 32 .......A.................... ATTCGCCAAAGCAATCAGCGCCTCTTCACCAC 201769 28 96.4 32 ............G............... ATTCACCAGAATTTTCAGTATGACAGGACCAG 201709 28 100.0 32 ............................ TTTGAGTACGGCCAAATCCCCGTCATCACCAT 201649 28 92.9 0 ............G...........A... | ========== ====== ====== ====== ============================ ================================ ================== 5 28 93.6 32 GTTCACTGCCATATAGGCAGCTTAGAAA # Left flank : GTGGACACCTATTTATGGATTTAAAGATAGTTATAGACAGCACACCAACGCTAAAAAAGCCCCGTCGAACCTTCACTGCTGAATTTAAACATCAACTTATTCAGCAATGCCAGCAGCCAGATACATCGGTGGCTAAGGTCGCAATGCAACATCAGATCAATGCCAATCTGTTGCATAAATGGATTCGTCAGTCCAGATCAATGGTTCCATCATTAACAACCCCATCTTGTCCACAGACCGACTTCCTTCCCGTCATTCTTCACCCGACGCCAGTCAAACAAGAAGCACCTCCGCCACCTGTGCCAGAGAGGAAAGCTACCGCTCATATCAGGATTCCATTACATGATGAACAATGTTCCGTAAAGGATCAGATGATCGAAATCGAATGACCGGTGGAGTCTGCAACTGAATTACTGCTTTTACTTCAGGGCTTGATCAAATGATCCGTATCGATGAAATCTGGTTGTCTACCCAGCCCATGGACATGCGTGCGGGTATGG # Right flank : CACCCAAAATAAAACCGGAGCATTGCCCCGGTTTTATTCTTCATCTATTTATTCTTCTAATAGACTTCTTAACATCCAGGCAGTTTTTTCATGTACTTCCAGCCGTTGGGTTAGTACATCCGCAGTTGGCTGGTCATTGGCTTCTTCCACCACATCAAAAATACTGCGTGCGGTCCGTGCAACTGTTTCATGGGCACGAACCAATAACTCCACCATTTCATTGGCTTTTGGTACACCTTCGACTTCTTCAATTGATGCCAGTTTCACAAATTCTTTATAGGTACCCGGTGCCGGAAAACCCAGCGCACGAATCCGCTCGGCAATAACATCCAGCGCATTCCATTGCTCGGTATATTGGGTCATAAACATGGTGTGCAGACTGTTAAACTGCGGCCCGGTCACGTTCCAGTGGAAATTATGGGTCATTAAATACAGGGTATAACTGTCGGCCAGAAGTCGGGAAAGTCCTTCAACAATTTTGGCCCGATTATCTTCAGAAA # Questionable array : NO Score: 3.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.5 Confidence: MEDIUM] # Array family : I-F [Matched known repeat from this family], //