Array 1 7516-8525 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGMT010000498.1 Streptomyces sp. SID7909 contig-16000028, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 7516 29 100.0 32 ............................. ACCGGGCCGGGCGGGATCTACGACAGGTTCGA 7577 29 100.0 32 ............................. AGCAGGAGGGCGGGGCCACAGGCCCCGCCCTC 7638 29 100.0 32 ............................. CTCTAGCGCTTCTACAGCTGAGCGGTGGCCCG 7699 29 96.6 32 ............................G CAGGGGCAGCAGCCAGAGCATGCCGTCAGCGT 7760 29 100.0 32 ............................. TGGTCCAGAACGAAGTTCCAAAGCTGGGCGCG 7821 29 100.0 32 ............................. CGCCCCCGGCCGGCCCGGCCACACCTACGCTG 7882 29 100.0 32 ............................. GGCGTCGAAGAGCGGGCCGACAACGGCAAACA 7943 29 100.0 32 ............................. GGAGGCCCTGGCCAAGAAGAAGGCGGCCGACG 8004 29 100.0 32 ............................. ACCGGCTCAGCCAGATTCGGGCCGTACGGCGA 8065 29 93.1 32 ...T.....................C... GTCACGTGACGATGCCCGAGGAAAGTCACGTG 8126 29 93.1 32 ...T.......G................. GCGGGCCGGGCCTGGCGCAACGCAAAGGCCGA 8187 29 96.6 38 ...T......................... ACCGAGCCGCCGCGCCCGCACCTCCAGGAGCTGGCCGG 8254 29 96.6 32 ...T......................... CGGGGGTCGGGTGGCAACCGGGGGGAGCAACC 8315 29 96.6 32 ...T......................... GCCGCTCGCCGGCCAACCAACGGCTCGGGTGG 8376 29 96.6 32 ...T......................... GGACATCCGCTCGTGCCGGCTGCGGCACCATG 8437 29 96.6 32 ...T......................... GACCTCGACGCCATCGGCGACGACCTCGATGA 8498 28 89.7 0 ...T......G..............-... | ========== ====== ====== ====== ============================= ====================================== ================== 17 29 97.4 32 GTGCTCCCCGCACGCGCGGGGATGGTCCC # Left flank : CCGCTCGTAGAGGCTTACGGCCCCACGCCCGCCCCAGGCGACGAAGGCGTCGGGCTCGTGATCGTTCCCGGGGTGCGGGAAGGAGACCTTGAGCACGGCGGGGGGCGTGTGGTCGCGGCGCACGGGGAGGATGAGGCCGACGCCGCCGTGCGTGAGCGGGCCGTCGGGTGTGCAGGCCCACTCGTCGACCAAGGCGTCGACGAGCGCGGGGAGTTCGCTGAGCCAGGCTGCTCCGGCGTCGCCTTCGCGCTCGACGGTGGTCCGCGCGAACTCCTCGGGAATCACGATCATCCGGGCACTGTACGTGGGGCGGGGCGGGGGTGGGCTGGGGTTTACGGGGCGGCGGGTGGCTGTTGCTGCTGAACGGGGGGTGGGGGTGGGGGTGTTGGCCTAGGGTGGGGGTGGGTGGGTGTTGTGGGGGCGTTGAGGGGGATATGCCGGAGTGTGTGGAAGTGGTCAGAAGCAGCCCTGACCCGTGGCAAAGCCGCAGGTCAGGAAGA # Right flank : CGCCGTTCGCCGGCCTGCTGCGCCTGACGCCTTGGGCGCCGCTCCCCGCGCGGCCCCAGGCCGCCCACGTACCCTGGCCGCCATGCCCGCCCACCCCGAACCCCTCAGCCTCCGCCCCCTCGCCTTCACACGCGACGAGATCCGCGAAGTCGTCGCCCTCTACGCCAGCAACCCCGCCTACTGGCGCGCGGCAGGCGAGTACGACCCCGGGGACATTCAGGCGGAGGCGGTTGAGGCCGATCTCAGGGCGGAAGTCGCTGCGGAGGGCGGCGAGGTGTTGGTTGGCCGGGATGGGGAAGGACGGCTCGTCGGGGTCGTTTGTCTGCTCGGCCGGCATCCGAAGGACGGGCTGCCCTGGATCGGGCTGCTCATCGTGGACGGTCACTCCCGCCGTACGGGAATCGGGCGGCGGCTCGCCGGGCTGGTCGAGGAGCGGTTCCGGGGCGAGGGGCGGAGCGGCATCCGGCTCGCCGTGCTGGAGAACAACCCCGACGCCCTCG # Questionable array : NO Score: 5.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.75, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCACGCGCGGGGATGGTCCC # Alternate repeat : GTGTTCCCCGCACGCGCGGGGATGGTCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCCCGCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-16.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 12316-12772 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGMT010000498.1 Streptomyces sp. SID7909 contig-16000028, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 12316 30 100.0 31 .............................. CCGCGTGGTGTCGGCGGCGCCATGTCGTCGG 12377 30 100.0 31 .............................. GCCGCCGTGACGGGGTGATTGGAGCCCGCCG 12438 30 96.7 31 .............................T GAACGGACCACGCTCCAGCACACGTTGAGCA 12499 30 96.7 31 .............................T TCCCCCGCAGCGGGGAGGTGATGGTGTGACA 12560 30 100.0 31 .............................. GAGACCACCATGCCCACCACCCCCTACCGCG 12621 30 96.7 31 .............................C CCGAGGCCGTCGAGGCTGATCTGCTGCACCA 12682 30 90.0 31 ....C....C..T................. AGGAGGCGTACCAGTGGGTCCGCTCGGTGGA 12743 30 83.3 0 .....T........C..........C.T.A | ========== ====== ====== ====== ============================== =============================== ================== 8 30 95.4 31 CTGCTCCCCGCGCGTGCGGGGATGGTCCCG # Left flank : ACGCGGCGAGGGCCCTGTCGGCAGCCGACCGGTTCAGCCCACTGCCGTTCGCGTTGGGCCTCCGCGTCCCCGCGTGCACGTACATCGCCGCCGAGAAGGTGCGGGGCGCCCAACCTCACTGGTTCTACAGCCGGAGTGACCGGTCCTGGGCGTGCGTCCTGGTGGAGGACGGGGAGCCGACGGCTCGCGTGTGGCAGCGGGGCGAGCGGCGGTTGTGGGATGAGGTGGAGGGTGCGTATGCGTGGTGGGCGGAGCGGGGGTGGCCGGGGTGGGAGCGGTTCGGGGTGACGGTGAGGGGGGTGGGGGAGCGGGTTTGGGTGGATGAGGTGGGGGAGTGGGTGTGAGGGGGCGGGCTGACGGGAACGGGCCTGCTTGAGTTGGTGGTTGGCCTACACTGCGGGGTCTATGCCAGCTGTGGGGCTGTTGGGGTGGTTATGCCGGAGTCCGCGAAAGTGGTCGGAAACGCCACGCACTCAAGGTATACCCGCAGGTCACGCAGT # Right flank : AGCCGCGACACGCCATCCGCGCCCAGCTCCGCTCTCCGCGGAAGGCCCCACCGCGCCCGGACGAGGTGGGGCCTTCCGCCGGACAGCGCCTCGGTCAGGACCGCTGGCCGCCAGCCTGCTTGACGACCTTGTCCGTCACGTCGACCGTGTCCCCGGCGGGAGGCGCGTCGACATCGACATCGGTTCCGAAGTCGCTGAAGTCCATGACGACCTTCGCCTTGCCCTGGTTCGCCGAACCGGAGTCCTTCGCACCCCCGGCCGGCTGCGCGGCGATTTCGATCTGCTGGCGGCGCATCAGTCCCTTGCCATCGACCCACAGGTCCACCGGCACCGTCTCGCCGAGTTGTTCGCGCAGCTTCCGGGCCTGCGCGGCGTCGCCCTTGGCGAGCTTGTCGATGTCCAGGGCGACCTTGTAGTGGGTCGTCTCGACACCGCCCAGGCTCTCCGTGCCGACCTTCTTCACGTCCTTCTCGGACAGCGACTTGGAGTAGGCGAAGGAA # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGATGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 15958-16291 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGMT010000498.1 Streptomyces sp. SID7909 contig-16000028, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 15958 29 100.0 32 ............................. GCGGCACCACACCCACAACCTGGCCCGGCACC 16019 29 100.0 32 ............................. TCGTCCACAGCGGTGCGCTGCTGGTCGGCCAG 16080 29 100.0 32 ............................. CCCGCCATCAGCGCTCTGACCGAACCGGCCGA 16141 29 100.0 32 ............................. ACGGACCGATTCGCGACGGTGATAGCACCGGT 16202 29 96.6 32 ....................C........ GACCGGCTCACCCTCGCTGACTGGCTGCTGCG 16263 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 99.4 32 CTGCTCCCCGCACGCGCGGGGATGGTCCC # Left flank : GGGTACGAAGTGCTCCCGCGGTACGTCGGCGAAGGCGGCCAACCACCGGCTCTGACGGGACCCTTCGCCGAGGGCCGCGGCGAACCGGGCGCGCAGGGCGGCCGTGGCGATGCCATTCGAGTCGGTCATGTGGTGATCCCTTGCGGGTAGTTGGTGGGTGGGGCGGTGACGGTGGGCATCCGGGTGCGATTCTGCGTCCGGGGTGGTTTGGTGGCGGGGTTGTTCTCGAAAGAGCACCCGTGTGCGTGAAGGGCCCACGGCGGAGCTGAGATTTGAGCGATAGGCGTAGCCGTGTACGAGTGCTGCGGCAGATCGTCGTGGCGCCGGGCGGGCTGTCCGGTGGGTAGGCAGGGTGGAGGACGGTGCGGTGGCGCGAGCGTGAACGGTTGGGCGGGCAGGTCGCCGAGTGGGCAGGTCGCGGAGATTCGGTCGATATGCCGGAATCAGTGAAAGTGGTCAAGAACAACGATGGCGCGGGATAAAGTCCCAGGTCACGGAGT # Right flank : CTCGGGCTCGGGCAGGAGGTCCGCGAGGTGGACCTGCTCCCCTCACGCGAAGGGACACCATCACCCACGCAACGCCCGCCCAAGCCCCCACCCGGCTACGCTCCCCGGCATGACCGACCCTCAAGCCCGGGCCGACTTAGCCCCCGACCTCATCCGCTCCCTCCTCCGTGACCAGCACCCCGATCTGGCCGAGCTGCCTCTCAGCCTTGCCGCGCGGGGGTGGGACAATCAGTTGTGGCGGTTGGGGGACGGGCTTGCCGTGCGGTTGCCGTGGGCGACCTCGTCTGCTGATGAGCTGTTGTTGAAGGAGCATGCCTGGGTACCCGGGCTGGCGCCCGGGTTGCCGTTGCCCGTGCCTGTGCCTCAGCGGCTGGGCGTGCCGTCCGAGCGGTTTCCGCGGCCCTGGTTGGTCACCACTTGGGTGCCGGGGGAGCCGGGCGATCGGGTTCCGGCTACGCGGGGTGAGGAAGCGGCCGATGGTTTGGCCCGGTTTCTCAGTG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACGCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //