Array 1 288-37 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AGHG01000220.1 Streptococcus sobrinus TCI-377 contig00220, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	====================================	====================================	==================
       287	    36	 100.0	    35	....................................	TGTACGGTTGCTTTTTCTTCATCTGTCTTGGCTTG 	
       216	    36	 100.0	    36	....................................	ATAAGGTCAAAAAAATCAGCATCCATAAATTCATCA	
       144	    36	 100.0	    36	....................................	AATAGTCTGGGCATCATTAAAGGTAAAGCGCCTGTT	
        72	    36	 100.0	     0	....................................	|                                   	
==========	======	======	======	====================================	====================================	==================
         4	    36	 100.0	    36	ATTGAATGCCCCATACCCTCGTAAGGGGACGGAAAC	                                    	       

# Left flank :   ACTCTCTGATAAGAGCCTTTAAAGAAAAAGATCCCAATTGCTATCTGGCTAGTTATACGAGGAGGTGAAGCCATGGGATGCGATTTTAATTTGACGGCAGAAGAACTGCTGTTTGCCAGAAATTATCAGCTCTACTGCTTAGTGATTTACGACATTGCAAATCAAAAGAGACGACTCAAATTGGCACGATTGCTGGAAGGCTATGGCAAGCGGGTTCAGAGATCCTGCTTTGAGGTAAAACTGAGCCAGAAGGTTTACCGTCGGCTGCTCCAGGCGCTTGAAGACTTTTACGAGGAAGATGAGAAAGACTGTATCACACTTTATAAAATTCGTCGGGAAGAGAGGGTTGTTTTCAACTCTTATGATGAACCAGAAGAAGAGACACAGACGATTATCTTATGATTGCAAAACCTCTATGAACATGATAGACTGTTATCGGATAGTTTCAAGCTGAGGCACAAGATATAGCAGTGTCCGTCTAGACTGACACAAAATATGCT
# Right flank :  CTGTTTGTTGACAGCTGCACCAAATGCAGCAACGCCT

# Questionable array : NO	 Score: 2.86
# 	Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATTGAATGCCCCATACCCTCGTAAGGGGACGGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [6,11] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-10.20,-9.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [30.0-58.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,0.64   Confidence: LOW] 

# Array family : NA
//


Array 1 37-214 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AGHG01000077.1 Streptococcus sobrinus TCI-377 contig00077, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	====================================	===================================	==================
        37	    36	 100.0	    35	....................................	TGACTTTGACCCTGGTCATAGGCTTGGCCAGCACT	
       108	    36	  97.2	    35	...............G....................	ACAGAGTAAGGAAATAGTCGTTTTACCATCGCCAC	
       179	    36	  86.1	     0	......AT......C...............A....T	|                                  	
==========	======	======	======	====================================	===================================	==================
         3	    36	  94.4	    36	ATTGAATGCCCCATACCCTCGTAAGGGGACGGAAAC	                                   	       

# Left flank :   CAATTACTAGTGTTCTTTTCATATTATTACTCCTTTA
# Right flank :  TTATCACACCAGTGTATTTTTGCGATAGGTGAATCGCTTTCCTATCGCTGCTTCTGCAGGCTTAGACCTTTCAGTCGGTTTTTTTAGGAGAAATATCTTCAAAAAGGATTTGACTTTTATCGCCTATCGCCGAAAGGTTTATAATCAACCAAAAATATAAATAAAAAAAGGGCGCCTTTTCGGTGAAAAATACTTTTCAGCCGGAGGTGCCTTTTCAAATAGAGAAATGATGAAAGAACTAAGATTATTTTTTAAAAGAACAGCTTTGCCGGCGAATGTGCTAGCGGTAAAGCTGCAGGGTTATCTGATGGGTCAGATTTCCGATGACTACGCCGAATTTTTGCACCAGCAGGAAACCAATCCCTATGCCTCCTTCGTAATAGATAGAGGGGATCAGCAAGTCTGGACGGTCAGTCTCCTGACAGAACAGACTTGTGAGCAGCTTCAAGAAGGCTTGCTGTCTCTGCAGCATATTCAACTAGACTCTTATGCCGAGCTTA

# Questionable array : NO	 Score: 3.89
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATTGAATGCCCCATACCCTCGTAAGGGGACGGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [6,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCGGCGTACCAAAATCCCCGTAAGGGGACTGAAAC with 95% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [60.0-53.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
//