Array 1 27373-28420 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAGFWU010000010.1 Enterobacter ludwigii strain 11894 contig00010, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
     27373	    28	  96.4	    33	..T.........................	CCTCCGCTTCGCGTCATAGTCCAGCGCCTGCAT	
     27434	    28	  96.4	    33	..T.........................	GGATTGCTACCGATGAAAGCTGTAAGCTTTGAG	
     27495	    28	 100.0	    33	............................	AGCCTCTTATCCTCGAAATCGAGATTGAAAAGG	
     27556	    28	 100.0	    32	............................	AACAGGCCATCTACCAGACTCACCTTCACGTA 	
     27616	    28	 100.0	    32	............................	AGGAACGATTGGTTTCTTCGACAATACCACGA 	
     27676	    28	 100.0	    32	............................	TCACAGCGCCACCAGCGCCGAAAACTTTGTGA 	
     27736	    28	 100.0	    32	............................	GTAAATAGAAATTGGATCACCAGCGACAATGG 	
     27796	    28	 100.0	    32	............................	TGTATAACCTTTCAGTTTCTGCGATTGCGCAT 	
     27856	    28	 100.0	    32	............................	ACAAAGACCCGGCCAGCCTGGACAGCATCGAA 	
     27916	    28	 100.0	    32	............................	TTCTTCAGCCAGCGCGGCGCGGCGGGCTTCCA 	
     27976	    28	 100.0	    32	............................	TTGAACCGTTGGCGTTGAACGTGTAATCAACC 	
     28036	    28	 100.0	    32	............................	TCACCTATCAACAAGGTGTGCCGCGAATGTTC 	
     28096	    28	 100.0	    32	............................	TTGATAATGAACACGATTGAACAACAACTAAG 	
     28156	    28	  96.4	    32	.................T..........	TTGTCACAGATGCAGAAATGCACCTGCGATTT 	
     28216	    28	  96.4	    32	..............G.............	GAAAGCTATCACCATAACAGTATGAAACTGTA 	
     28276	    28	 100.0	    31	............................	GAGTGATGGACAACCATAATCACAGGAGAAA  	G [28302]
     28336	    28	  82.1	    28	.CT......T.C...T............	ATAGAAAATAAGGTCTCCCCCTTACTCT     	C [28358]
     28393	    28	  71.4	     0	T......AT..A....A....C.T...G	|                                	
==========	======	======	======	============================	=================================	==================
        18	    28	  96.6	    32	GTGCACTGCCGTACAGGCAGCTTAGAAA	                                 	       

# Left flank :   CACTCCCACAAACGCAGCCCATCTGTCGCTGCCTTGGGGCGTATCTGGAAGAAATGAAATCCGGCCTCACAGAGTCAATGCGTGATTTTCAGGTGGTGGAATTTGAGGACGAAGCGGAACAACCGAGACAAAAAGAGTGGCTGCTTGAAGGCACCGAAGCACAGTGTGATTACTGTCGGGCGTTAAATCACGTGTTGCTGATTTCGCATTTTGACCACGATATGTTGCCGCACCTCACGGGGTTATTGCATGACATAGCGCATTCAATGGCGGCAGATTTGGTCGCATCTCGAGGTGCAGAAAAGGTAATCCATATTATTTCCTGACGATGGTTCGAAGCCTGGAGGGTTCTTCTGACTCCAGATGTGTAACCCTTTTTTTTGCAGCTTACGTAACGCATTGATTTATCAAGCATGGTTTCACGGTGCAGAAAAAAGGGTTTAATGTGCAGAAGTTGATTATTTTCTTTTCTAACAATAAGATGGCGTGGTTTCCCTTCA
# Right flank :  GCAGAAACAAAGCCCAAATAATTGTTCAAATAATCAACTACACCACAAAAAAATAAGGCCGGGAAAAACCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGATTAAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACAGGAAGCGCATTCGTAAAGGGGAGACGACA

# Questionable array : NO	 Score: 6.09
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGCACTGCCGTACAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-8.00,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-17] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [66.7-66.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.65,0   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
//