Array 1 79127-78493 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJKB01000003.1 Akkermansia muciniphila strain GP22 scaf-3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 79126 33 97.0 34 ..........A...................... TTTCCGCTGTCCTCCATTGGTGCGAATGTCTGCT 79059 33 100.0 34 ................................. CCAATCCGTCATACAGATTTAACCAAGCAAGGCA 78992 33 100.0 33 ................................. ATTGTAAATAGTACATAAGTAATTCATTTTTAG 78926 33 100.0 33 ................................. CCAGCTTTGCCACCGAGCCGGCGCGCTTCACAA 78860 33 100.0 33 ................................. CTGGTCACGTCCTATGACATGGCCGCCGGAAGC 78794 33 100.0 34 ................................. CTTGCCTCCAGTGAGGCACCGATTGCGGACAAGC 78727 33 100.0 34 ................................. CGGAGTAAGGAAGAAGACGATTTGAGGAGCATCT 78660 33 100.0 34 ................................. TCCGGATTACGCTTTATGAGGCTGATAGTTCCGG 78593 33 100.0 34 ................................. CATCCACAGTTATTGCACACAACGCAATCACCTA 78526 32 78.8 0 .............T.........A.-...CCTG | TC [78498] ========== ====== ====== ====== ================================= ================================== ================== 10 33 97.6 34 GTCGCACTCCGCACGGAGTGCGTGGATTGAAAC # Left flank : AGTAAACCATGTACATTCTCATTACTTATGACGTCTCCACGGAGGATAAGGCAGGGCAGCGCCGCTTGCGCCAGGTTGCCCGCGCCTGTGAAAATATCGGGCAGAGGGTGCAGAATTCCGTATTTGAATGTGAGCTGTCTCCGGCCCAATTGGTTGACATCAGAAGCAAGCTGCTTAAAATTATTGATAACGAAAGCGACAGCCTGAGGATTTATCACATGGGTTCCAATTGGCATCATAAAATAGAACAATTGGGGAAGGAAAAAAGCTATGATATTTCCGGCCCCTTGATTATTTAAAGACTGTTGAACACGGCCTTTGCGCCAATCCCAAGCTCACACAAATTTCCCGGGAGGCCGGCGATTGGTGTAACGCGTTGGAAATTGAATATTGACAGATGATCGCCTAGAGAGGGAGACCGTGCAATGACGGTCTTCTCCGGGAGGTTGGCGCAAAGTATCGTTTGCGCTGTTGAGTAACAGTGCATATGATCATACGCA # Right flank : ACAATGAAAAAGCTCTCCAGGCTTGTTTGGTCTGGAGAGCTTTTTTGTGGTGATGCAGCATTAGATTTCAGGAAGGAGCCTGGTCGTCCAGATTGAGTTCTGCGGGCGGGATAGCCTGGAGCAGGGCCAGAATGGGGTCCTGCGTTGCGGCTCCCGTTTCCTGCCTGCGTCTGAATTCCTCTTCTTCCTGCTGGAGGGCAGCCAGCTTGGTGTCTTCCACCAGGGCCTTGAATTTATCTGCCTGGGAGTATTCGCCGTCCGTATCCCGGAAGACCCGGGCGAGCCAGCGGCGTTTTTCTTCCGTGCTGAGCAGGGAGTCCTTCATGTGCCGGGGAGGGTATTTTTGTCCAGCAGGTTTCCGGCCAGCTGCTCGCCTTCCGCCGTGGGGCGGTACACGTAAGGTCGGCAGTCTCCGAACCGGTTGACGTATCCCTGAGCGATGAGGTCCTGCAGGATGTTGGTGACGGTATTGGGGTGCAGGCGGGTGGCCTCCGTGATGG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGCACGGAGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCTCCGCAAGGAGGGCGTGGATTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.30,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,9.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 88343-88117 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJKB01000003.1 Akkermansia muciniphila strain GP22 scaf-3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ================================== ================== 88342 31 100.0 33 ............................... CTAACCCCAATCCCTGTTAACTATTAACTCATA 88278 31 100.0 33 ............................... GATGCATTGCCACGGTAATTGCTTGGTATCGGG 88214 31 100.0 34 ............................... AACGGATGCTGATCATTGCTCCCCCGCTGGCTCA 88149 31 83.9 0 ........C....G........G....C..G | C,G [88119,88123] ========== ====== ====== ====== =============================== ================================== ================== 4 31 96.0 34 GTCGCACCTTCACAGGTGCGTGAATTGAAAC # Left flank : CTCGGAGAAAACGATGCCTCCCTCAAGGACACGGTGACCATCCGCCACCGCGACTCCATGGAACAGGAACGCGTCGCCATCAAGGACTTGCTGCACTGGCTCATTGCCCGTGTGCGTTAACGGCGCCTTTGGCGGCTGCTGATGCCGCAAAACACTTCAAGGCCGCTCCATATTGAATGGAGCGGCTTTTTGTTTTCGGAATGGCAGAGAAGGAAAAAGTTGCTGGACGATAGGCCGTTGACCATCTAGCATTAAAAACAGGTTGGTGAACCAGATGGGAATCAGCAATTCCAAAATGAATGCTGAACCGCTGATCTGTTTGCGCCAACCCCAAGCTCACAGAAATTCCCCGGGAGATCGGCAATTTCTGTAAGTCCTTGAAATCAGCAGATTGACATTCCCTCCAATAAAATATAAGGCGTAAGGAATATGCATCCTGAAAGAGGTTGGCGCAAAAAGCGATTTGTACCACTAACTTTCAACGCATATCCCCTTCCGCC # Right flank : GGACACGTTTTGGAAGGTTGTCACACTTGCATGGAAATGTAGATGTGAACATCAAACACCAGCCTTACTAAATGGCATTTCATTAAGTATAGGTTGCTGAGGGAGAATGGACTTGGAGCCGACTTTCTTGGAGTAATAAAGAAAAATAATAGTGAAGCTTGCATCTTTAAAAAGGTAGTTTGTGATATAAATAAACCTTCTCTTCAAGAAGAATTTGTTGTTGAAGTATGGCAATAAAATGTTAGGTTTCCATTGCATTTTGCATCAAGAGAGGGTTAGACGAAATGATTAGAAAGTGTTTGGAGTCGGAACTGGAAACAATCTATGAAATTATCAATGATTCAGCCGTGGCTTATAAAGACAGGATTCCTGCCGACAGATGGAGGGAACCTTACATGCCCGTGGATGAATTAAAGGAGCAGATCAGAGATGGCGTGGTGTTCTATTGTTTTGAAGATAAGGGACGCCTTCTTGGCGTCATGGGGATTCAGGACCGGGAG # Questionable array : NO Score: 8.66 # Score Detail : 1:0, 2:3, 3:3, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTCACAGGTGCGTGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTCACGGGTGCGTGGATTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-4.00,-4.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 23808-23440 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJKB01000001.1 Akkermansia muciniphila strain GP22 scaf-1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 23807 33 100.0 34 ................................. TTCATCCTCCCGCGCCAGCAACCGCGCTCCCGCT 23740 33 100.0 34 ................................. AACAACACCTTGGCAACGCGTACATCGTACTGGG 23673 33 100.0 34 ................................. TCGTCCCAGCACGAGTAATGTGGGGAGGGGATAC 23606 33 100.0 34 ................................. ACAGCTCCTCGCCCTCCTCTCCATTATTCTCCTC 23539 33 100.0 34 ................................. TTTGCTGAACTCAAAATACTTAGCATTTTTCCCG 23472 33 84.8 0 ..T........C.....G...........G..T | ========== ====== ====== ====== ================================= ================================== ================== 6 33 97.5 34 GTCGCATCCCATACGGGATGCGTGGATTGAAAC # Left flank : CTGCTTCCCGCAAGATCACGGGTAAAAACCCTGCAATACCGCTCCGGCATCACGGCCTACTACATCCTGAACATCTACCCGGACTCCATGACGCTGGACACCTACGCCGCCCCCAACAACGGCGTTACCGACGAAGGCCCCAAAAGCGGCGAATTCAAAAAACTGCACTCCTACGGGATTCCGATGAATTAAAAACCGGAATCTACGCGGCCCCAACTCCATACGGGAAAGGAAACTGGACTCCTTCACCCGTTCCGGATAAACTTGAACCCAACGCGGCCAGCAGGCAGATGAGGGCAGATGAAGCCTCCTTCCCCCTGCTTGCGCCAACCCCAGGCTCACAGGAAATTCCCGGCAGACCGGCGGTTTTCATAAAGCCTTGATTTAAGTACATTGACATCATTGGAATAAAAACTACGGACTTGAAAATAACAGCACGATAACAGGTTGGCGCAAAACGGCAACTGCACCACTGACCATCAACTGTTAACTTCCAAACC # Right flank : GAGCCGTCCGCCAGAATTATGGAAGAGACTTTCCGTCAGATACTGCATCAAATGTGCGGATATTCTTGATCCCGTAATACATGGCCGCTCCGCGGTTGACGTAGTCATCCGGGTTTTGGGACAGGTCCACCCAGAAGATGAAGGAGCACCAGGGGGAAGGAGGCAACAGGGAAGGAACAACGACCTCCTGAACGCCTGCCTTTTTCTGTTCCAGAATCAGCCGGACGCGCTTTTCATGCTGGCGGAACAGGAGCAGGTGGTCATGAAGGGTGGAGAGAACGCACAGTCCGGACAGAACCAGAAAAACGGCTGTAAAGATACGGGGCCGCGGCATGGCGCAGGGAATGCCGTACCAGGCACGGAGGAGTGCCAGCACGCCAATGCCGAACAGCAGGGTGGCGGAGAACATGGCATGGTCCGCCGGAACAACGGCGGCGGCAAAGGAGAGAGCCATGGCGTATGCCGTCAAAATATATGCCGCAGCCGCTCCAATCTGGGTT # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCATACGGGATGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCATCCCGCATGGGATGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-6.10,-6.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 438919-439983 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJKB01000001.1 Akkermansia muciniphila strain GP22 scaf-1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 438919 31 100.0 34 ............................... ACGGGGAAGCCCTCCCCGTCATCCATATCTGCCC 438984 31 100.0 33 ............................... TTGAAATCATCCAGCATTAAGGGAGTGATGCGG 439048 31 100.0 34 ............................... ATGCCGCCGGGATGGCAATCGTGGATGAAATGTT 439113 31 100.0 34 ............................... TTCTTGAATATCTCGCCACGCAAGAAGCCATCCC 439178 31 100.0 35 ............................... TACTGTAGCACTTCCGTAACCGATATACCCAGAAA 439244 31 100.0 34 ............................... CAGCCATCACTGCCTTCTTTTGGACTCTGAATTT 439309 31 100.0 34 ............................... CGGAACGGCTGGGAGGCGTTGCCGTTTACGCAGT 439374 31 100.0 34 ............................... TGGTGTAACAAGGCCGGGGATCAGTTGGCGCTGA 439439 31 100.0 34 ............................... AGAGGAATGGGCTTTGCCCCTTGCGCCCGGTCAT 439504 31 100.0 34 ............................... TTTATACGTTAAAGTTAAAGGATTTTTGAACATT 439569 31 100.0 32 ............................... CTCTAAGCAAGGGGCACAACAACTAATAAAAA 439632 31 100.0 34 ............................... ATGGAGAACATGGACCAGCTGCTGACACGCATGG 439697 31 100.0 33 ............................... TTGAAATCGGAAGACTCACTTGACTCCTTAAAG 439761 31 100.0 33 ............................... CATGTCGGAAAAACGGATGACTCCGCCTTGGCC 439825 31 100.0 34 ............................... ATTACCAACCGAGAAAATGCAGCCTTGATGCGGG 439890 31 100.0 33 ............................... TAAAACTTTATAAAAGAATTGTAACTGCCTATA 439954 30 90.3 0 .......................-G.A.... | ========== ====== ====== ====== =============================== =================================== ================== 17 31 99.4 34 GTCGCACCCTCACGGGTGCGTGGATTGAAAC # Left flank : GAAGATTCCCCTGCTGGGCTGCATGGCCTCCGCCATCTCCGTGGTGCTGGTATGGCTGTTGAGCCTGAACAAGTGGACGCGCAAGAGCATCATGTAAAAGTTCGGATGTTTTCCCAAAGGCGCTTCAGGACGGCAGCAATGCTCCTGAAGCGCTTTTTGTATGAAGGGGCGGGGAAAACGGTATTCCCGGGAAAAGGACTGTGTAAAATTCTGGACGGAGGAAAAGGCGCGGGTTAGGATGCCCCTGCATCGTGCACAGGCCCAGGTTGCCGGAGACGGTTGCTTTTTACAGAAGAAAAAGCATAGTGTCCGGTCTCCCTTGCGCCAACCCCAAGCTCACAGGAAATTCCCGGGACACCGGCGATTCCTGTAATCCGTTGGGAATCATATCTTGACAACAATGATCTCTTTTTTACGGCCTGGAATCCATGCATAGGCATGGGAGGTTGGCGCAAAACGCTCACGGCGTTATTGATAATCAACCTGTAAACCCCCAGGCT # Right flank : CACGCTGCAGGAACAAGGAACCGTGCGGAAAGCCAATGCCATTGGGAGGCTTTACCAGTCGGAGAATGCATGCCCGGCAGCGCAGGTATGACAGGACGGCGGCGCGGACCATATTGCGGCGGCATGTTCCGCGTGGTTCTTTTTTGATATGAAAGTTCTTTTATTATGAGCGTGTTGTGTAAAATTTACGTATCCGTTGTTTAACGCTGGACCGGGAGAACTGGCTGAGCGGGAGCCGGGATGAATGAGGGAAACGTCCTCATTCTTGATCTTTTTTCCACGAATGCTGTCAAAGGTTTATACAGTATGAACGTGCACGATCAGGTAGAAAGAGTAGCGGCAATGGAACATTCAGTGATTTTTCCGGACCATCGGAAGGTTTGCGCCCTGGGGCAGGGAACCTGGAAGATGGGAAAATCAGCCTTAAGGGAGGCTGAAGAGATCAGGGCGCTGCGTGCCGGCATCGAGCTGGGCATGAGCGTGGTTGACACGGCTGAAAT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTCACGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTCACGGGTGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.30,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 909187-908219 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJKB01000001.1 Akkermansia muciniphila strain GP22 scaf-1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =============================================================== ================== 909186 31 100.0 34 ............................... TTAAGGTAAAAGCCGTTGCTATATTTTCATATTT 909121 31 100.0 34 ............................... CGTCCCCTCAATGTCACTTACAATGTTCCATTCA 909056 31 100.0 34 ............................... CCATTGCTCCTTGGTTTCCCCGTGGGCGGCAAGC 908991 31 100.0 33 ............................... ATGCCGCCGTCCGTCGTCAAGGTCTGTATAATA 908927 31 100.0 34 ............................... AGCCACTACGGTACGAAAGGGATGTTTTCCCCGT 908862 31 100.0 35 ............................... AACTTGCGGGAAAACACCACGTCGGCATTGTCAAA 908796 31 100.0 34 ............................... CGATGGTCTTGTCCACCTGCTTAATGGACCCGGT 908731 31 100.0 33 ............................... CGGTAGCTTGACAGGGTGAAGAATGACGTTGTT 908667 31 100.0 34 ............................... GGAAGAAGGAGACGGTCACTGCGAATATGCCGGA 908602 31 100.0 35 ............................... ATCCCCTGCCCCTGTGCAAATAAAGGATGAAGAAC 908536 31 100.0 34 ............................... AACTGTTTGATGTCATTCATTATGGATTCTTCAG 908471 31 100.0 33 ............................... ATGGTTATAAGGCCAACACTGACAAGCACGAAA 908407 31 100.0 33 ............................... CTGGCTGCCATCAAGCGCGACGACTACCAGGCG 908343 31 100.0 63 ............................... TGGACAATTTGAACCGGCAGTGGGAGTACTGGGGACCATGGATTTCTCCGGAAGTTTTTCCAG 908249 30 87.1 0 ............T.......C....-....T | A [908228] ========== ====== ====== ====== =============================== =============================================================== ================== 15 31 99.1 36 GTCGCACCCTCACGGGTGCGTGGATTGAAAC # Left flank : GGGGGAAAGAGGGATTTCCGGTTATTCATCCATTGAGGGGAGCCGTCCGTAAGGGCGGCTCCTTTTTGATGTTGCAGGAAATGGCGCAGCGGGTGCTTTTCCTTATACGGGAAAAGGACGCCGGGACCTTCCGAGAGAAATGGTTTATGGGCGTGATTGTTGCCGGATTCACGATGCACGGCATCGTTTGAAGCTCCGGGGAAGATGTTGCTGGACGCGGCAGGGAGGAACGGCTAGCATGAATGAATCAAATTGGAAGCAAGCGGTACCGGACACGGAAAGACGGAATATCCGCCATCGGACCCTGTCTGATGCCGCCTTGCGCCAACCCAAAGCTCACAGGAAATTCCCGGGAGACCGGCGCTTGCTGTAAGTGCTTGGGAAATGCATATTGACAAAAGAACCACCCATTATTGAACCTGGCAGCATCCGGCATCCGAATTAGGTTGGCGCAAATCCCCTTTTGCACGCTTGATACTCAACCCGTATGCTTCCAGGCC # Right flank : TGAAGGTGTATACTTGACGATACTGAATAGAGAATCCTCTCTGTTCCAAAAAATGGATTTAACTGGTTATTTGTTGATTGTTTCTATTTAAGGAGAAGATTCTGTGGACCATATGGAGGTGTTTCCGTTAGCTTCATGATGAGGCGCGAACAGCCTGTTTTTAGAAAAGGAGAAGTTATTCGGAGAGTTTCCTGCGGCATGGGGCATTTTTCCGCGTTCACAGTTTGTGATGGATAAGGCGGGAGGAATCCAATATAGAGATAAAATGCACACAGACTGGTTGAATGATTTTCTGGAATGGGCGCCTATTCTGCTGATGATACTGGTAGCGGTTGTTTTTCTGGCTGCGCTGAAATGGAGAAGCGGGAGGCTGAAGAAGTCCATGGAGGAATGGAAGCGGAAGATGGTCCGGGAGGCGGAGGCAGGCCACCCCTCCGCCCAGTTCCAGCTGGGGCGCATTTACCAGAAGGGGGATGGCGTGGAGAAGGACCCGGACCGGG # Questionable array : NO Score: 9.09 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:-0.11, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTCACGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTCACGGGTGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.60,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //