Array 1 827347-826403 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZNJ01000002.1 Klebsiella sp. 2680, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 827346 29 100.0 32 ............................. GGATTATCAGGCGAATGTCACGCCGTCGATCA 827285 29 100.0 32 ............................. TATCCCGGCCAGTCGGGCGCATCAGCAGCAGC 827224 29 100.0 32 ............................. AGTGCAAACAGCGCGAGGGTAGTCTTCCTGGC 827163 29 100.0 32 ............................. CTGCCTTGCTGACGCGTCTGGCTGGTCAGTAT 827102 29 100.0 32 ............................. GGCATGTACGGCGATGTCGCCATTGTGGTTTA 827041 29 100.0 32 ............................. CGAGTTCACAGTCGGTGAGTGATTTGACCAGT 826980 29 100.0 32 ............................. TAACTCCTGCCAGTTAGCCGCACTCTTTAATT 826919 29 100.0 32 ............................. CGGCACTGGCATTGCGGCAATAGCCTCTTCAA 826858 29 100.0 32 ............................. TGAATAATAAGACTGGATTGATAAGCTGGCCA 826797 29 100.0 32 ............................. CGACGCGGTGCGATATGCGGTGGTCATTTGTG 826736 29 100.0 32 ............................. TAGCCGCGCTTGAGGCGGGTTGTACCGCCCCG 826675 29 100.0 32 ............................. CGCATCGACACAAGGGCTTTTGGCATTCTGCT 826614 29 100.0 32 ............................. GCTGAGTTGCGAGCAGGTGGTCTGGCGATAAT 826553 29 100.0 32 ............................. CGTCACTGTGATGTCGTCGTAACCCTGCGTCA 826492 29 100.0 32 ............................. CAGGGAGTATAGTTTTATGCTCAGAAAAGTTC 826431 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 16 29 100.0 32 ATGTTCCCCGCGCAAGCGGGGATAAACCG # Left flank : GTATTCTCAAAAGGTAATATTCAGCGTCTGGTCGGGGCGCTGGTGGAGAGCCATCGGCTGACGTTAAATACCCGTTATCAGGTTGATTATATTGAAACGCTATATGGTCTGGTGCGCTCCCGGCTGGCGGTGGCGATTTTGCCTGAGCTCTATACCACCCACCTTCAGGACCCTGCGTTGAAGATTGCTCAGCTTCAGCAGCCAGCGCTGACGCGGACCGTGGCGCTTATGCGCGGGCCACAGCCCCTGCCGCCGTTAATTGAAGCGTGTTTTTGTTTACTGCAGAGTTCGCTGCGGGAAGTGGATTTGTAGAGGCATTCTGTAGAGGTATAGCTATCGCCGCTTGTTTTGGTGAAATACGAGAGAGGCAATGGAATACAGTATCGTGTCTTTTAAAATCAAAGCGTTATAGCTCTTTAATAAAATCACGTTGTTGCAAAAATGTCGGTAGAATGTTTTGTGTCGATAAATTTATTATAAAACAATAAGATATATTTAGT # Right flank : CGCAATGTGCTGACCGAGCTAATGAAGGCTCGTGGTCTGGCTACAGTCTTCCACACTGATCTGGATGCCCTGAACGCCGAACGGGTAAGGATTCAAACTGACGACCAGTAAGAGGCTGATGACAAACCTGTATCAAACATTGTGCTCGCGTTTCTACCGGATGGCGGCAAAAGCCTGACCTGTCTCATTGGCAACAGCGCTGCGCCGGTATGGTGGCCCGGACAGGCTCAGCGCCTCCGGGAAAGGATGCTAAGGCAGATGCTTGATCAGCACGTCGGTGGCCAGGTGATTAATGTATTCCATAGAGTGCGAGGAGAGCACGCCCAGCAGCCGGTTATGATGCCCGGCGATAATCAAATCGATATTTCGCTGGCGCACGCACTCTTCAACATCGGCAAAACGACGAGTGGTGACCAACGAGAGCGTCTGCACAGGGATAGAGACCGTCGCCGCCAGTTCGCTCAGCAAGGCTTTAGCCTGAATGACCTCCTGAGAAACGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCCGCGCAAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched ATGTTCCCCGCGCCAGCGGGGATAAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 245235-242946 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZNJ01000003.1 Klebsiella sp. 2680, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 245234 29 100.0 32 ............................. CGAAACGGCCTAAAGCGCAGCGCGTTGATTTC 245173 29 100.0 32 ............................. CTACCATCATCGTTGCGCTTGATACGTTCCTC 245112 29 100.0 32 ............................. CTTTGCCGGCATGGTGCAGGGGTTCAGGCATC 245051 29 100.0 32 ............................. CAATCATTCCCCCTGTTCGTTTCCCGTGTCGT 244990 29 100.0 32 ............................. CGGATAAACGTTCTTGGACGCCTGCTGCGCCT 244929 29 100.0 32 ............................. CGCTGTAACCTTAGAGTCATCAAAAGTTTTTG 244868 29 100.0 32 ............................. ATAGGGCTTTCTTCCAGCTGCGATAAGTTAAG 244807 29 100.0 32 ............................. GCGAGGATTGCGGCCATCTACCTTACTTGGAA 244746 29 100.0 32 ............................. TTGTGTTAGTGTTTTAACTGTATAAATACCTT 244685 29 100.0 32 ............................. CGGGTGAAGATATTAATAAAAGTGGCAATACT 244624 29 100.0 32 ............................. CTGATCGTGACCTCGCCGGTCGGGTTTGATCC 244563 29 100.0 32 ............................. CCTTTGACAGTAACGCCGGGGTTAAAACTGCA 244502 29 100.0 32 ............................. CGGTCGCTGTGGTCGTTCTGGTGGTGGCAATT 244441 29 100.0 32 ............................. CCATCGTCGTTGATCCATCGTCTTGCCCTCAG 244380 29 100.0 32 ............................. CTGGCAGGTGCCATTCACTATGCCGACGTACA 244319 29 100.0 32 ............................. CTGGTGGAAGTTTTATCAGCGTCAGTGACGTA 244258 29 96.6 32 ............................A CTTCTCTTAGCTCGGCTGGGGTGTAAAAAATC 244197 29 100.0 32 ............................. AATTTTGAGCCAGAGAACCGACCGCCGATCAT 244136 29 100.0 32 ............................. TTTACCCGGATTATCTCGTTCAGCCAGTAAGC 244075 29 100.0 32 ............................. AGGCCTGGCTCATGCTGGGTCATCCAGAATTC 244014 29 100.0 32 ............................. CAATTTTCGACGAAACGTTCGCTGTCTTCGTC 243953 29 100.0 32 ............................. GAGTATACTGGTAACGGCGTTTCGGCAGTATC 243892 29 100.0 32 ............................. CCAGGCGAGGGAGTCGAGTGTTTTTGAGCGCA 243831 29 100.0 32 ............................. GTGCGGCATGGTTTCTGATGAAGCTACAAACC 243770 29 100.0 32 ............................. CGTGGTGGCCGGTGCTGCCACGGCATTCTGAT 243709 29 100.0 32 ............................. GTTCAGCTCGCAAACTCGGGCACCGCACCAAC 243648 29 100.0 32 ............................. GCAGCATGAGATCGTCAATCTGGCCGGGGAAA 243587 29 100.0 32 ............................. TGATTTTGATCTGGCGTTGAGGCAGTACAGCA 243526 29 100.0 33 ............................. CTGGCGTTGGCGTTCGAGCCTGGGCAACGCTAA 243464 29 100.0 32 ............................. AGGTTATCAACATTTTGTCTGAAAAGAATTGC 243403 29 100.0 32 ............................. ATCTTTGACAAAAAGAAGCGGGCAATTAAAAC 243342 29 100.0 32 ............................. GACGGAAAAGTCAAAACGGGACGTGAAGCCTT 243281 29 100.0 32 ............................. TCAGGTTTTTATATCATCCACACTGACGGCCA 243220 29 100.0 32 ............................. GCAGTTCGAGGTGATTGTTTCATCCGGCCCGT 243159 29 100.0 32 ............................. CCTGTGGCGGCACTGACGCCGCTCAAGCTGGT 243098 29 100.0 32 ............................. ATATTGAGCGTGGTTATATATTCCGCGTATTG 243037 29 100.0 32 ............................. GGCTGTACGTTCGTGGAGGATTTCTACGATGA 242976 29 93.1 0 .......................T..G.. | T,T [242948,242951] ========== ====== ====== ====== ============================= ================================= ================== 38 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTTCTCGCTGCTGGTGAGATTGAGCCACCGAAACCTGCGCCAGATATGCTGCCTCCCGCAATTCCTGAACCGCAGTCACTTGCTGATAATGGGCATAGAGGGCACGGTTAATGAGTATGGTGGTTGTTGTAACGGAAAATGTCCCCCCACGTTTGCGAGGACGACTTGCTATATGGCTCCTGGAAATCCGGGCTGGCGTATACGTAGGCGATGTCTCAAAACGTGTGCGAGAAATGATCTGGCAACAGGTTACCCAGTTGGGAGGTATTGGAAATATTGTTATGGCCTGGGCAACAAACACTGAGTCTGGTTTTGAGTTTCAAACCTGGGGGGAAAACCGTCGTATTCCGGTAGATTTGGATGGCTTGAGGTTGGTTTCTTTTCTTCCCATTGAAAATCAGTAGGTTACCTGCTCTTTAATAAGGTGGAGTTGTTACTAATAGGTTGGTATATTGTTTATTTCTAAAAAATCCTATAGAAAACAGATATATAAATTTAGT # Right flank : CAAGACAGCAGGGGGAGACGCGGATAGGGTTTATCATTCGCCTTTGCGGGCGGGCTTTGCTGATAGCCTGTTTTGAGACGTTTTTTTCTCCGCTTTCGCCAGTTCTTTAACCAACGGCAGCATAATCCTCATGACATCGCGGCTGCGCTGCGCAATTCGGCCCGGCAGCGCTTTATCAATATGCTGCTGGTTATCCAGTTGCACATTATGCCAACTGGTGCCATTCGGGAACGAACGGGATTTGGCGCGCTGCTGATAACCATCTTTTCTTCCTAACGACCAGTTAGTGGCTTCCACGGACAGCACCGGGATGCCCGCTTCATCAAACACGCTGGCATCGTTACAGCAACTGGTACCTTTTGGGTAGGCAGGATTCAAACCGGGATTGCTGAATGCGCTAATACCTTTACTGTGCGCGATAGCCAGCGCCCGGTCGCGGGTTAGCTTACGCACCGAAGCTGGCGTGTTGCGGCCACTATTAAAGTAGAGCTTATCACCCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //