Array 1 2059519-2058295 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP039712.1 Vagococcus zengguangii strain MN-17 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   2059518	    36	 100.0	    30	....................................	ACGCTGGGTCAACGAAAAAGTAATTCCAAT	
   2059452	    36	 100.0	    30	....................................	TTTAGCCTTTACCTTATATTTAATCTTCGA	
   2059386	    36	 100.0	    30	....................................	ACTCAACAGATGCAAACGTAGCTTTCGGAA	
   2059320	    36	 100.0	    30	....................................	TTTCAGAAGTCATTACACGACTGATACCTT	
   2059254	    36	 100.0	    30	....................................	TGGCAGTTTCGATTGATAAATTGATTGGTT	
   2059188	    36	 100.0	    30	....................................	ATTCTTCATGGATAAATGTCACGTAATCAC	
   2059122	    36	 100.0	    30	....................................	TTCAGCTCCAAAAAGCTTACTGTTTAACCT	
   2059056	    36	 100.0	    30	....................................	TACAAATTATCGAAAGTTTAGCTTGCCCAA	
   2058990	    36	 100.0	    30	....................................	ACTCTGCTAACTCCACCAATTCTGATAAGT	
   2058924	    36	 100.0	    30	....................................	CTAAAGATTCTGATATGCTTTTATCTGAAA	
   2058858	    36	 100.0	    30	....................................	TCAAATAGATGAAGTTACTAAAGCAATTCT	
   2058792	    36	 100.0	    30	....................................	CGTTACTAGAATTCGCTGAAGCTTACGAGC	
   2058726	    36	 100.0	    30	....................................	TTCCTTTCATCCACCCAGCTCCCAATTCGA	
   2058660	    36	 100.0	    30	....................................	TGAACTACGCCTCGCTGTTCGCTCGTTGTT	
   2058594	    36	 100.0	    30	....................................	CAAGGACCAGAGCCTAGCGAAGAAGAACGT	
   2058528	    36	 100.0	    30	....................................	GGCGTGGGTGCTCTTCATGATAGGCATATA	
   2058462	    36	 100.0	    30	....................................	TGAAAGAATATGATGGTGTATTGCAAGCTA	
   2058396	    36	 100.0	    30	....................................	GATTGTCAAAAAGATTAAGATTGGATATTG	
   2058330	    36	  91.7	     0	.................................TCG	|                             	
==========	======	======	======	====================================	==============================	==================
        19	    36	  99.6	    30	GTTTTAGAGCTGTGTTGTTTTGAATGTTTCCAAAAC	                              	       

# Left flank :   TTATCAAGAGTTAGCCGAACATTTGAATGATGATCCTGAGAAAAAATCCAATATAGAATATTATTTGAATCATATACACGATTGCCTAATAAATGATTCAATAGAATATGATTTAGATTTGATTATGGAGGAACCAGAAATACAAGATGTTTACAAGTTTTTTAAATTGAAAGTCAATTCGATGCAATCCTCAATTTTTGAAACTACACTAGAAATAATAGATTTGTATAAGAAGTTGAAAAAGAAAAAACTGTTAGTTTTAATTAATAGTTGTTCCTACTATAGTCAAGAAGAATTACAGGAATTAATATCTTACATTTCTTTGCAAAATAGTCCAGTCTTAATGATTGAACCACGTAGAATAGAAGGTGTAGAACAAATTGTTTTAGATAATGATTTTTATTTAACGAATTAGTAAAGAGATGGAAATGTTCAAGACTAAAATCTTGCTAGGATGAGCAGTGCGATTACGAAATTCCGTAGAAAGATTTTTCTGCGAG
# Right flank :  GATAAGAAAATAACGATTGAAACAAAAGATGAATTTATTCGTATGAATGCTCTTTACGCTCGGAAAATCAATAAAATTAGTAAAGGGTTAGTCTGGTTTTATTTTCTAGTTGGTTTTTTAGTAGTTCTGCATGGTTTTTATAATATCATCAGTGTTTGGGAATTTTTGACATCTATGTCTAATGTTTTGTATAGTTTGTTTTTTTGTAGGAGAAATATTAATCGGTGTTTTAATCATGTTAGCCGGCTACTATTCAGGTGTGTTAACGGCTAAGCGTTGGGTTAAAAAGCCTAATAATCAAGTGGCGTTTGAAAAGGTGACAGTGACGATTGATGATCAAGGATTTATTGTGAATAATGCGCGACATGAATTTTCGCGAATTAGTTGGCAATCAGTGGGCAATGTTTACGAGACTAAGAAATTTTTCTTATTTGAATTTACGGAACATCAAATTAGCACGCTTCCCAAACGTGTCTTAACACAGGCTGAACAAGAGGAAT

# Questionable array : NO	 Score: 6.24
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGTTGTTTTGAATGTTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:66.67%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 95% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-2.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [3-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [71.7-60.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,5.28   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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