Array 1 61625-58385 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADRFT010000005.1 Porphyromonas levii strain DD47 JD62_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 61624 30 100.0 34 .............................. GAAGGTCGTATCGGTGCGAGTGTTAAGTACGATG 61560 30 100.0 34 .............................. ACGGCAATCACCGACTTATGCGATGCCCCCTTAG 61496 30 100.0 34 .............................. TCAGAGGAGGAGCGCAAGATCGCACTAGCTGGAG 61432 30 100.0 36 .............................. TTCTGCCGCACTGTCACAGTGTATCTCCCTCTGTTG 61366 30 100.0 36 .............................. GCAGTACATTGCGTATTTGCCCTGTGAGGGCGAGCT 61300 30 100.0 35 .............................. TTTAATACTCATTGCCTTGCTCCTTGCCCTTGCAG 61235 30 100.0 36 .............................. TCAGGAAACATGGTTAGCATAAACTTCCCCTGCACT 61169 30 100.0 35 .............................. TCTCCTCAAACTTACGCGCAGGGATATCCTCTATC 61104 30 100.0 35 .............................. TTCGAACGCTAATCGAACAGCGTACGAATACCCCT 61039 30 100.0 35 .............................. TTTCCTGTAATCAGCCATTCTATGTTAATATCATC 60974 30 100.0 34 .............................. GTTTGGATCGCTCTGAATACTCTGCTTTATCGGT 60910 30 100.0 36 .............................. GCATTAATCATCTGTAGCAGGTCTTGCCCCATCAGC 60844 30 100.0 36 .............................. TCCTCTTGATGAGCGACACAGATAACACAGCTAAAC 60778 30 100.0 36 .............................. AACGCTACATTATCCTTGATTATGTACGCTAGTATC 60712 30 100.0 36 .............................. AGCATTAGAATGAAGTCATAAGAATACAAATAAAGG 60646 30 100.0 36 .............................. GCTTACACTCTATCCGTAGCTGACCTGAGAAACCTG 60580 30 100.0 36 .............................. GAAATTGCCAGCATCTTTCATATACCAGCACTCTGC 60514 30 100.0 36 .............................. GATTGTATCTCTTTTAGGAGTGTCGGGTCTACGTCC 60448 30 100.0 36 .............................. GTCTATTCCCCTCCACCTCTGCTTCACCCAAATCGG 60382 30 100.0 36 .............................. GTCATTTTAGTTAGGCGGTATACGGTTAGAGCTTGC 60316 30 100.0 36 .............................. AGAGTGAATATATCACACTTGCCCCTATCTCTGTTT 60250 30 100.0 35 .............................. GTCTATACCAAATTGTTCCCTAACCTTGTCGGTTA 60185 30 100.0 35 .............................. GTGCTATCTGTTACGCTAAAACCCTGCTTGCCGTC 60120 30 100.0 35 .............................. AGCAAAGTTTGTCTTCTGGGGCGATTTTATCATCG 60055 30 100.0 36 .............................. ACGATAACGAAGAATAAGCGCAACAACAAGACGTAC 59989 30 100.0 35 .............................. AGATAAAAGACACGGTGAGAGGTAACGGCACCTCT 59924 30 100.0 35 .............................. AAGTTGGTCTTGATGCTTATTGTGTGCTGACCCTT 59859 30 100.0 37 .............................. TAAGTATATATAAATGTATTCGTCAATCCAATGCCGT 59792 30 100.0 36 .............................. AGGCTATAACCTTTTTACAGCAACCCACCAGCACCG 59726 30 100.0 35 .............................. ATGGAATGTCCGTTACCAACCCTTTAAGGGATTTA 59661 30 100.0 34 .............................. CTATGAGTACCGCTACGAGCTTGGTGGTGCGATG 59597 30 100.0 36 .............................. CCTACATCTACGACCGCTACGGCATCCCTAAGCCAG 59531 30 100.0 37 .............................. GAAGGAGATACGATTCCGTAACAACCTCGTGCATCTG 59464 30 100.0 36 .............................. ATAGAGCCTTGAGCATAACCTCTACAGCTCTAACCG 59398 30 100.0 36 .............................. TCTCGCTTTTTACATAGTAGTAGCTATTACCCTCGA 59332 30 100.0 35 .............................. TAATGACGGAGCAGACCAACCGACTACTGCGCATT 59267 30 100.0 35 .............................. CCAGCTGCCGAGGGGTAATAACGCTCTCAAAGAGG 59202 30 100.0 36 .............................. TAGAATAGCCTCCTCCTGAAACCGTTTCGTTAACGA 59136 30 100.0 34 .............................. AAGAGAGTGGCGCAAAGTACATGGAGTGACGAGA 59072 30 100.0 36 .............................. TAGCTCTTATCCATCTTCGCGAGCTCCTTCTGCAGC 59006 30 100.0 36 .............................. TGATTATGTTTTGTGACTCCCTCGCCCCCTTTCTCA 58940 30 100.0 36 .............................. TCAGGAAACAAAGAGCCTTGCACAAATCAACCACGT 58874 30 100.0 35 .............................. TAGACAATACCTTCTTACTCATAGCTTCAAAAATT 58809 30 100.0 36 .............................. GCTCTGTACGCAAACATCTTCGTTGAAGTCGCTAAA 58743 30 100.0 36 .............................. GTGAGAACACGCATCAATCTGCCACCTCCCAAGGCT 58677 30 100.0 35 .............................. CTTATACTTCTTTGGGTCGCTGCTGTCCGCTGGCA 58612 30 100.0 37 .............................. GATGTAGAGAGACTTCTATTTGAATACGATTACAAAA 58545 30 100.0 36 .............................. ATCGCAAGTACCTGAGTATCCACACTCTCATCCACG 58479 30 100.0 35 .............................. TTTTATCCTCTCGACTTGAGTTCTTGTTGAAAAAA 58414 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 50 30 100.0 36 CTGTTAATCGTACCATACTGGAATTGAAAC # Left flank : ATAATATTTTCATCAAGACAAGAGGGGTGGTTAGACAAAGAGATTATGGGAATTGAGAAAGCATCTACCGATAATTTCTTGTGAGTATTTTCCTATTTCGAATTACACGCCAATGCGTAAGGATGATAGAGATCATAGACATTTCGAAAACTAATAATATCTTTGTTTGGGTCGCATCAGACTAATAGATGTAAATCATGGTTAGCATTTTAGTGCTCTGTAGGACAGTTCCCATATCATACAATATGTGGTGCGCATAAATTGCTCTATAATGATGGGTTATTCTCTAAATGTCTGTCGATACTGGTGTTCACTAGTATTTTAGACGGTCTATGAAAATAGGAGGAATATTATGTTATTGATAATCAGTAGAATGGACTGTTGTCGTAGGTGCACTCTTATTATACGATTAGGGTTCGACGACATCTTCCAAGCAAAAAGTGCCAAATAAATTTTCTAACAGACTTGTAACCAATGATATATTATAGTAAATTTGACGG # Right flank : TATTCGTCATCATCACGCACCTTATGTTCGATAGTTCTGAGAGATGGGGGGATTTGAGAGAGGGGGAGTGGTCGAATTCTCTAGCGCGAGCGGGGAAATTTATCTCTAGGAATAAAAATATTTATTCCTAGAGATAAATGTTTTTATTTGTGCAGAAAAGTAAATTTATTCCTAGGGATAAATTTGATGGTGAAGTAGACTATTTTTTTGCTGCTGTATATCAAGCGCTTGGGTGAAGGGTATTGCGCTGTAAATTGGTATATTTGTACGCTAATGTATAGGTGTGTATGAAGCTAAGGACTGAGGATTTAGTAAAGAAATATAAGAGTCGTACGGTGGTGAACCATGTCTCTATCGAGGTGGAGCAAGGTGAGATCGTGGGGCTTCTGGGGCCTAATGGCGCTGGGAAGACGACTACTTTCTATATGACGGTGGGGTTGGTACAACCCAATAATGGTCGGATTTTCTTGGATGATCGAGAGATTACCAAGGAGCCAATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTAATCGTACCATACTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA //