Array 1 1404544-1405366 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHDN010000001.1 Cellulomonas hominis strain DSM 9581 Ga0415207_01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1404544 29 100.0 32 ............................. GAGGCCGAGCCTGGTCGCGGGGTCACCGACTC 1404605 29 96.6 32 ............................T GACTGCCGCCACCAGCCGGTCGTAGGCAATCC 1404666 29 100.0 32 ............................. GTCACGGACGCCGAGTTCGACGAAGCGCTGGA 1404727 29 100.0 32 ............................. AAGATGAAGGAGCTCGGCATCTCGGCGTACGA 1404788 29 100.0 33 ............................. GTCTCGCTCGGCGCGAAGTACGCATCCCGGGCA 1404850 29 100.0 32 ............................. CCGATGGGCAACCTCTACCTCACCAAGGGCGA 1404911 29 96.6 32 ....C........................ GCGGTCGCGTTCGGCTACCGGCCGACCCGCGC 1404972 29 96.6 32 ...................A......... GTCGTCGACATCGCGACGCAGGCGAAGTACCG 1405033 29 93.1 32 .......T.T................... TGCACCTGAACCAGGGTCAGTAGGGCGGCTGC 1405094 29 100.0 32 ............................. TCGCCGCGGAGCCGTTGGCCTGCAGCGTCCAT 1405155 29 96.6 32 .............A............... GTCAGACCCGCGATGAGCCCGACCCATCCGGC 1405216 29 96.6 32 ..............C.............. GCGTAGGGCGTCATCGGCTTACCCGCAGACGA 1405277 29 96.6 32 ............................T CCGCGGTCCGCCATCCCCGTGGTGTGCGACCA 1405338 29 96.6 0 ............A................ | ========== ====== ====== ====== ============================= ================================= ================== 14 29 97.8 32 GTCCGCTCCCCGCGTGCGGGGATGAGCCC # Left flank : GCGCCGTGTTCTGCGTCAACGACCTCGTGGCCGTCGGGGTGCAGCGGGAGATCCGCCGGCGCCGCCCCGAGCTGCTCGGCCGGACCGCCATCGTCGGGTACGACGACATCGAGATCGCCGCCGAGCTGGCGACGCCGCTGACCTCGGTGCGGCAGCCCGCGTACGAGGTGGGCTACCGGGCGGCCGATCTGCTGCTGTCCCGGGACGCCGACGGCAACCCCGTGCGGGACCACGTGGTGTTCCAGCCGGAGCTGGTGGTGCGGTCCTCGAGCGTGCTCGCGTGAGCGGTGCCCGCGCCCTGCACCGTGACGTCCCCTTAGTCCGAGCGGGCCTCTGCGTCGCCGGCGACGTCCGCGACGGTCGCAAAGCCGCTGGACGTGACCGCTGAGGCGTGGCCGCGCACCTCCGTCACCGGTGCGTCGCCGTGCTCATAGCCCTACCCCCGGCTGGGACTGAAGGAGAAGCGGCCAGGGCCGGGGTATCTTCGCTGGTCAGGATGT # Right flank : CTACGTGTGGGACTGGGAGACGGATGACCCCAGTCGCGCGCGTCATCGCGTCGGCGGCCCGTCGGTCAACTTCCGCGTTTGCGCGACCCCACCAGGACATCCACGCGACTCTGAGCTACGGTATAAGCAATAGCAGACGGAGCCTGACGATGCTTATGCCAGACGTGTGGTCCGCACTAGCCGAGAGCCACGAGATCCTGCCCACCGCCGACTCGAGCCTTCGGGCGGACGTGGTGCTGCGTGGGCCGGCGTTCCCTGCCACGCCCTACGACGTCAGAACGGTCTCGACCCTGCACCCGTCACGCGTCCGACGGTTCGCCGACCCTGCCGGCAGCACGCCGGAGGACCTGCCGCAGGTGCTGGTGATCACCGCGTCCGCGACGCCCGCAGCGGTCGATGCGGCACTGACGGCCCGCGTGTCCGTCCTCATCGCACCGGAGCACGGCCCGGTCAGCGGAACGCTGATCGACAGCGACGGCCGGTCCCACACCGTGGACGCA # Questionable array : NO Score: 5.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCTCCCCGCGTGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.50,-10.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1416640-1420208 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHDN010000001.1 Cellulomonas hominis strain DSM 9581 Ga0415207_01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1416640 29 100.0 32 ............................. GTGTGGTCCAAGGCGATCGGCCCGGCCCCGAA 1416701 29 96.6 32 ............................G GGCTCGGGCACGGACGAGGCGACGCTGATCTC 1416762 29 100.0 32 ............................. CGCCACGCCGCCGGCGACCTGGAGGCCGCTGA 1416823 29 96.6 32 ............................G TCCGCGAACTTCTTCACCGCCAGCGTCGCGAG 1416884 29 100.0 32 ............................. GCGTACGTCACCGAGCCACCAGGGGGGATCGG 1416945 29 100.0 32 ............................. TACTGGGCCGTCGCGGGCGCCGGGAACGGCGA 1417006 29 96.6 32 ............................G GGTAGGGCAGGCCGCTCGTCATGCGGCCGCCG 1417067 29 96.6 32 ............................G GCCGGGTGCGCGTGCGGGTGCCTCACGAAGCC 1417128 29 100.0 32 ............................. GTGCCGGACTTCCCGAGGGGGTGACGGGTTGC 1417189 29 96.6 32 ............................G CCGGGTCGAGCGTGCGGACGTACCCGGGGTTC 1417250 29 100.0 32 ............................. CTGCTGATCCCGGCGGCGGAGAAGGCCGGGGA 1417311 29 100.0 32 ............................. GCATCCGCTCGCCCACCGAGTCCTCACCCGGC 1417372 29 100.0 32 ............................. GGCGTGCGCGTCGAGGGGGTGGAGTCGTGATG 1417433 29 96.6 32 ............................G GCGGGGGGTCCCTCGGGGGGGTACGGAAGCCT 1417494 29 100.0 32 ............................. CGGGACGCAGGGTTGAACACCGCAGCCGTGAA 1417555 29 96.6 32 ............................G GCGCTCGGGGACATCCTGGGTGACCTCCTGTG 1417616 29 96.6 32 ............................G CCGCTCGATCTCCTTCGTCGCCATCGACGTGA 1417677 29 100.0 32 ............................. CAGCGGCTGGCCGCCGCTGGTGAGACGCCCGT 1417738 29 100.0 32 ............................. ATGGGCCTCGTGTCGCAGGCTACCGCGGGCCG 1417799 29 100.0 32 ............................. TCGCGAAGCGACTCACGAACTGAGGAGAGCCA 1417860 29 100.0 32 ............................. TGGGCCTGCGCCTCCTTCGACTGCGGGGTGAG 1417921 29 96.6 32 ............................G TCGATCTCCGGGCCGCCCTGCACCTGCGACAA 1417982 29 100.0 32 ............................. GTGAAGGACTACGGCGCGAAGGGCGACGGGGC 1418043 29 100.0 32 ............................. TCCCCGCCGACGTACACGACGCCATCGAGGTC 1418104 29 100.0 32 ............................. TGCTCAAGGTCGCCCTTCAGGTTGTCCATCTT 1418165 29 100.0 32 ............................. CGGCGCCTGATCGCGGCGCTAGTGCCGCAGAC 1418226 29 100.0 32 ............................. AGGCCCCGCCCGATGAACGGGTGCCCCTCCGG 1418287 29 96.6 32 ............................G TACCTGATCCTGGCGAACATCGGACTCACGTC 1418348 29 100.0 32 ............................. AACTACATCGTCACGGGCAACGACTTCACGAA 1418409 29 100.0 32 ............................. CCCGCCGGCACCGTGATCGTCTGGGTGACGAT 1418470 29 100.0 32 ............................. GCGCCCAGCAGGCCAACGAGATCGACCAGCTC 1418531 29 100.0 32 ............................. GTGATCGCGTGGGCGTCGGGCCACACGCACAC 1418592 29 100.0 32 ............................. TCCTGCAGGCGCTGGCCCACCGACGCGAGCTC 1418653 29 100.0 32 ............................. ACGCTCGCGACCGGGGAGTACATCGACATCGC 1418714 29 96.6 32 ............................G GTGCGCGTCGGCTCGGTCGCGCCCTTGAGGTC 1418775 29 100.0 32 ............................. GTGTTGATCCGGTCCTCGATCATCGCCAGGTC 1418836 29 100.0 33 ............................. CGCCGACTCCGCGCTCACAGGTTGAGCTCCCAC 1418898 29 100.0 32 ............................. AGCCTCGCATGGGCAGCGGCGAACCCGTCCAA 1418959 29 100.0 32 ............................. CCTTTCACCCGGAAGGACTCCGTCCGCGGTTC 1419020 29 100.0 32 ............................. CTCGTGACGGTCCGCGCGGAGGAGCGCATCGC 1419081 29 100.0 32 ............................. ACCGCGAGGAACTTCAGCTCGCGGCCGTTCAG 1419142 29 100.0 32 ............................. TGCTGCGCGGTCTCGATGAACCGGTCACGGGT 1419203 29 100.0 32 ............................. TTGGGTCGCACGGTGACCGCGAGTTCGCCCGG 1419264 29 100.0 32 ............................. CCGGTCACCTCGCTCAACGCCGGGAAGATCAC 1419325 29 100.0 32 ............................. TGGTCCATCTGCCCGAGGAACGTGTCGTACGT 1419386 29 100.0 32 ............................. GTCTTCACCGCCAGCACGGCGACGCCGGTCAG 1419447 29 100.0 32 ............................. GTCGGTGCGGTCATCGCCCCGTACGCGGGAGT 1419508 29 100.0 32 ............................. GACGCCGAGATGCCCACCGGCAGCAGTCGGCG 1419569 29 100.0 32 ............................. CTCGGGGCGATCTCGATCGACCGGGTCCGGGT 1419630 29 100.0 32 ............................. GACGCCGAGATGCCCACCGGCAGCAGTCGGCG 1419691 29 96.6 32 ............................G GCATGAGCGTCGTCAAGTGGATCCTGCTGGGC 1419752 29 100.0 32 ............................. CTGGCCAAGCTGCGCGCCCTGTTCACGAAGAA 1419813 29 100.0 32 ............................. CGAAAATCGTCGCCATCGCCGCGTTGCGCTGC 1419874 29 100.0 32 ............................. AGCGACAGCGAAGTGCTCGTTGCGGGCACTCC 1419935 29 100.0 32 ............................. TCGGACGTGCGCAGATCGGCGTGCGAGCCGCG 1419996 29 100.0 32 ............................. GTCGTGGTGCCGGGGCCATCTGTCCAGCATCG 1420057 29 100.0 33 ............................. CCGAACCCGGACCCGAGCACACCGTTGCCGGCG 1420119 29 100.0 32 ............................. TCCCTGGTCCCCGCGAAGACCCTCCCGGTCAC 1420180 29 93.1 0 ......................G.....G | ========== ====== ====== ====== ============================= ================================= ================== 59 29 99.2 32 GTCGTCTCCCCGCGTGCGGGGATGAGCCC # Left flank : GCCGGTGGCACGTCCTACGCGGAGCCGGACTGGTGATCGTCCTCGTGCTGACCGCCTGCCCGGAGGGCCTGCGCGGGCACCTCACCCGCTGGCTGATCGAGGTCTCCGCCGGGGTCTTCGTCGGGAAGGTCAGCACCCGCGTGCGTGACGAGCTCTGGGACCGCGTGGTCGAGCTGTCCGGCCGCGGCCGCGCGGTCATGGCGCACACCGCCCGCACCGAGCAGGGGTTCGCCCTCCGCAGCCACGGGCACCACTGGGAGCCGGTCGACGTCGAAGGGCTCACGCTGATGCTCCGGCCGCACGGGGCGGAGTCGGCCGACGCGCCGGCACCGGCCGCGGGGTGGAGCAACGCCGGGCGGCGTCGGCGGATCGGACGGTAGCGGCACAGGTTCATCAGCGCTGATCGTCGCGCCCAGCGGCGGGCGCGACAGCCCTCTGCGAGGGTGCGCGGAGTGAAGTGAAAACGCACGTCGAGCGGGTATCGTCACAGGTCAGGAAGT # Right flank : GGACGGGAACCCCGTGCGGGACCACGTGGTGTTCCAGCCGGAGCTGGTGGTGCGGTCCTCGAGCGTGCTCGCGTGAGCGGTCGCGTGCGACCGGCCGGGTGAAGCGGGGCCTGCACTCGGCGCTCCGGTGTCACCCGCACCGCCCCTCCGCCGTCCCCCGTTCGGGTCGTTCCGCCTCTTAACCGGTTTATCACCCGCCCCAGCGCCGATCGGAACGGCGGAGCGCCGCCGCACGAGCGGTGCCGGAGCCCAAGGAGCGGGTCGATGACGACGGTGGCGGACGACAGGCGCGGAACACGGGTGGGCGCCAGGGTGGCCGGGCTCGGCTTCGCCGCGAAGATCCTGCTCACGGTCGCGATCGCGGTCCTCGCGACCGTCGTGGTGGGCCTCGTGTCCGTGTCCTCGGTCCGGCAGATGGCCGACGTCTCGCACCGGATGTACGACGAGGACGTCCAGGGCACCGCCCTCGCCGGGGAGATGCGGTTCCAGATGGTCACCGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCTCCCCGCGTGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.50,-10.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [4-3] Score: 0/0.41 # AT richness analysis in flanks prediction: F [41.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //