Array 1 69917-64032 **** Predicted by CRISPRDetect 2.4 *** >NZ_SJOU01000011.1 Olsenella sp. SW781 11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 69916 28 100.0 33 ............................ CTCCTCGGCGGACATGCCCGCGACGTCGGCGAA 69855 28 100.0 33 ............................ CGCTGCGGCCTACCTCGACATGTCGGTCGACCC 69794 28 100.0 33 ............................ CTCGCGCGACCTCGGGGCCGAGTCCTACCTCGC 69733 28 100.0 33 ............................ TAGCCCCGAGCGGCACGAGGCCGCCCGGGGCTT 69672 28 100.0 33 ............................ CATGCTCGTCCTCGGCGACGGCTATCAGGACGT 69611 28 100.0 33 ............................ CACGAGCTTCTCGAAGGCCCTCTCGCACTTCGT 69550 28 100.0 33 ............................ CTTCAGGGAGCGCGTCCGCGAGGCGCTCCGGGA 69489 28 100.0 33 ............................ CTTTCCGTTTTCCTTGCGGGTCTCGTCCTGCCC 69428 28 100.0 33 ............................ CGAAGCGTACGGGCTGGACGTCTCGCGCGACGG 69367 28 100.0 33 ............................ CATCCCCATGGGCGACTTCGCGCAGGTCTGGCC 69306 28 100.0 33 ............................ CGGCCTTTCCACCAACCGGCCGGGGACGCTCTA 69245 28 100.0 33 ............................ TGCCAACTCACTCGGTCCCATCGCGTCAGTCAA 69184 28 100.0 33 ............................ CTGCACGTCGGGGCCCCCGTCGAGGCTCGCTAT 69123 28 100.0 33 ............................ CGAGGTGTACAGGGCGGTCCACGGCCGCGACAT 69062 28 100.0 33 ............................ CTCCAGCGTGAACTCGACGGCCCCGCCGTTGAC 69001 28 100.0 33 ............................ CGCGCCCAAGCCCAAGCCGCAGAACACCTCCTT 68940 28 100.0 33 ............................ CGGCTTCTCGAAGCGCCTCGCGCCGATTGCCGA 68879 28 100.0 33 ............................ CCTCTACCCGCAGCCGGCCGCCGACTGGATATA 68818 28 100.0 33 ............................ CTCCGCCCATCGCGAGCGGCACCGCCACGATGG 68757 28 100.0 33 ............................ TCGGCGCGGACAGCGCATGGGGCCGGGCACCAC 68696 28 100.0 33 ............................ CATTCCATGTATGCGTCCCTTCTATGACAGAGG 68635 28 100.0 33 ............................ CTCGGCCATCCACGGCCACAGCCAGAAGGTCGC 68574 28 100.0 33 ............................ CGCGCGACACGAGACCGAGGGCCGTGTGGACCG 68513 28 100.0 33 ............................ CGCGACGCGAGACGGCGCATCAATCTTGAATGC 68452 28 100.0 35 ............................ CTCATCCTCGGCGCGCTCGGAGACGTGGGGTCGCT 68389 28 100.0 33 ............................ TACCTTGGAAATCTTGGTGATGGTGGAGACGCG 68328 28 100.0 33 ............................ TACGTCGCGACGTTCTCGAGTGGCTCCATGGCG 68267 28 100.0 33 ............................ TATGACGAGCACGGTGGCTTAGGGCACGGGTAC 68206 28 100.0 33 ............................ CCTCAGGAATTTCTCGTCTGCTCCTGCCAGACG 68145 28 100.0 33 ............................ CCTCCAGGCAGCCTTCGTGGGCGTCGGATCGCA 68084 28 100.0 33 ............................ CGGGGTCGACAACTACGCGCAGCTCGCCGAGGC 68023 28 100.0 33 ............................ CAAGATCACGAGCTTCGACCTCGCCTCCGCGGG 67962 28 100.0 33 ............................ CCCCTCGTACACGTCGCCGCCGCACGAGTCGAT 67901 28 100.0 33 ............................ CGGCTCGCTCTCCGTGACCGACCCCGAGGGCAA 67840 28 100.0 33 ............................ CAGACTCAGACGGCCTCGTGCCGACACCTCTGG 67779 28 100.0 33 ............................ TATCAGCGTCTGCCACGTCAACGACCGGAGCGG 67718 28 100.0 33 ............................ CCGTGGCTGCGATGGTTAGTACCGACAGGCAGC 67657 28 100.0 33 ............................ TACGACATCGAGACGGATGCCGTGAGTCCCGAC 67596 28 100.0 33 ............................ CGAACCAAATGACCTTACCGAACGAAATTAGCG 67535 28 100.0 33 ............................ CTTCCCGTCGGTCTCGTTGATGGCGACCGAGCG 67474 28 100.0 33 ............................ TTCGTATATTTTGGAGAGGAAATAGCGTTACGG 67413 28 100.0 33 ............................ CCTCACCGTTGGCGCTGAGCTGTCCGCGCCCTC 67352 28 100.0 33 ............................ CAGGAGCAAGGCGCGCGGCACGAGGTTCGAGTC 67291 28 100.0 33 ............................ TGCGCAAGAAGCACAACAGGTTCACCGGATATG 67230 28 100.0 33 ............................ CGCGTCCATCACGACCGAGCCGGCCCCGACGGC 67169 28 100.0 33 ............................ CACCGGCTACGAGTACTACGCCATCACCGGCCT 67108 28 100.0 33 ............................ CTCGTCGAAGAGCGCAGAAAGAAGCTCTCCCGC 67047 28 100.0 33 ............................ CGGCCGCTATCGCCGCTGTTGCGACGGTGAACT 66986 28 100.0 33 ............................ CTCGCCCATGGAGGTCGTGAGCCGATCGCCAAC 66925 28 100.0 33 ............................ TTGCATAGCGTCGAGACCAAGCACGAGGCGGTG 66864 28 100.0 33 ............................ CCAGCCCACCGCGCACGTCTTCTCGCAGGACGG 66803 28 100.0 33 ............................ TACCATCAACCTCTGGCAGCGCAACATGTTCGC 66742 28 100.0 32 ............................ TGGTCAGCTTGACGGCTCCGCCAGTGGCCTCG 66682 28 100.0 33 ............................ TCCCACGCCGATGTTCCCTGTGCTGGGGTTGTA 66621 28 100.0 33 ............................ CGGAGTGACGCTCAGAACCGATGAAACTGGTCT 66560 28 100.0 33 ............................ CTTCCGCGCTTTGCCCGCCAGCACGTGGAAGAA 66499 28 100.0 33 ............................ CTTCCGCGCTTTGCCCGCCAGCACGTGGAAGAA 66438 28 100.0 33 ............................ CATTCTCACGGGCACGGCGAGCGGCCTTGTCGC 66377 28 100.0 33 ............................ CACGCTCGTGGTCGCGGACGGCGACGTGATGAT 66316 28 100.0 33 ............................ CGGGGACGCCATCTTCTGCCAGTCGAGCAGGGC 66255 28 100.0 33 ............................ TCCCCATGCAGACGAGAAAGACGATGAAAACCG 66194 28 100.0 33 ............................ CGGGAGGTGGCTTGATGACTGATGAGATGTTCG 66133 28 100.0 33 ............................ CGGGAGAAAGTAGAGGCGTCGAAACACGCCGTC 66072 28 100.0 33 ............................ CCAGTCGAGCGTCGGCTCGTCATCGCCTTTCGA 66011 28 100.0 33 ............................ CCAGATTGAGCGCGAGCACGCCGAGGACTGCTA 65950 28 100.0 33 ............................ CCGGGCGGGCGTCGGCACCGGGGCCACGGCGGG 65889 28 100.0 33 ............................ CTTCCCCGGCGTCGGGACGGACGAGGTCGCCTG 65828 28 100.0 35 ............................ CCCCCCCGCAAGGGCACCACGCTCTCCGGCCACGA 65765 28 100.0 32 ............................ TACCCCCCGACGCCGAAGCATCGGGGGTATGC 65705 28 100.0 33 ............................ CGTCGCAGAGCACCCGAAGAGCGCGCACATGCG 65644 28 100.0 33 ............................ CCGGAGGGGACAGATGAGAAGGAAGCGGAAGGA 65583 28 100.0 33 ............................ TCGCCACCGGCTCGCCGTCCCACTGCGCGCGCA 65522 28 100.0 33 ............................ CTCGGCCTCGTACTCGTCTACGCCCATGTGGCC 65461 28 100.0 34 ............................ CTGCCTGCTCGCGCCTGCGGGCGGCATCATCGTG 65399 28 100.0 33 ............................ CCACAGCACCCACGGCCAGCTCGGTGATCAGGA 65338 28 96.4 33 ....................A....... CACCGCCAAGACCAAGGCGCTCAAGGCCCCGGC 65277 28 100.0 33 ............................ CGCGCTCAAGTCGACCGTCAACCAGCTCATCTC 65216 28 100.0 33 ............................ CGACTCGATCGCGGGATGGCTCTCCACGATGCG 65155 28 100.0 33 ............................ CGCGGCGATCGTGGGGGAGGGGAGCTACGTCTT 65094 28 100.0 33 ............................ CTCGGTGACCATCGGCACCGGCGCGCTAATGCA 65033 28 100.0 33 ............................ CTTGTCATCCAGAAGCTCCTGTAGGCGCCCGTA 64972 28 100.0 33 ............................ CGCCGTGGGCGGCGACCTCAACGACTTCGCGAC 64911 28 100.0 33 ............................ CGCGACGTTCGGCTGCGAGAAGACCGAGCAGGC 64850 28 100.0 33 ............................ CTCGGCCATCCACGGCCACTCGCAGAAGGTCGC 64789 28 100.0 33 ............................ TGGCCCGGTGGACAGCGTCGCGCAGTCGAGGTC 64728 28 100.0 33 ............................ CCAGGTCTGCTACCGCACCGAGGCCATGCTCGG 64667 27 96.4 33 ....................-....... CGGCGTCCGCAGCCTGTACGACCGCATAACCGG 64607 28 100.0 33 ............................ CGTCCCGATCGTGACGTCCCCGGAGGCGTACTG 64546 28 100.0 33 ............................ CACCTTGGAGGGCTACGCATCGGCCATTCGACG 64485 28 96.4 33 ..........................T. TCGGGACGCTCACGGCATCAGCGACCTTCGTGG 64424 28 92.9 33 ...T......................T. CACGTCGGAGATGAGGTCTCGCCCTCCGAACTC 64363 27 96.4 33 ...-........................ CGCGCGCTCCGTCTCTGGCGCCAAGATTGCCAA 64303 28 96.4 33 ...T........................ CTGCGGCTGGGACGCCGGCGTGTCGCCGTCCTG 64242 28 92.9 33 ............C.............T. CGACGACCTCGGAGCGGCCGACGTGCGCCCATA 64181 28 100.0 33 ............................ CAACGCCGACCGGGACTGGGCGTGGGCGGCGGC 64120 28 96.4 33 ............C............... CTGGCCGTTGTAGTAACCGATCTCCACCGTGGT 64059 28 75.0 0 ...........ACGA.T..A....T... | ========== ====== ====== ====== ============================ =================================== ================== 97 28 99.4 33 GTGCTCCCCGCGTATGCGGGGATGATCC # Left flank : CGGAGAGGTTGCCGCCGGAAGGCAATACTCCGATGAGTCCGAAGGATGATGCGACATGGTTGTCATGGTGTTGACCGCGTGTCCGCCGGGAGCTCGAGGGGATTTGACTCGCTGGCTCTTGGAGATTGCGCCCGGTGTGTTTGTCGGGCGCCTCTCCGCACGCGTGAGGGAGAGGCTGTGGCAGAGGGTTTGCTCGTTTGTGAAGTCTGGCAGGGCGATCATGGTGTACAGCGCACGCAATGAGCAGCATTTGGAGTTTGAGGTGTTCCAACCGGATTGGGCTCCGGTCGACTGCGAGGGGCTGAAGCTCATCAAGCGCCCTGTTGGTACGGATGGCGCTACCCTCATGGGCTCGCTTCCGACGGGATGGAGCAGCGCGTCGAAGCACCGCAAAGCGCATAAGTTTCGTTCGCGCTAACGGCGGACACGGTACCTCGTGACGGTCGAAGAAAGTGAATCAGTTGCTGCAGAACATCTGGTAGGCTTGCAGGTAGATTACT # Right flank : TGATGAGGGGCCCGTCTCGCGTGGCCCCCTCTTTCATGGGCTTTAGCCCGTGCCGCGCGGTACGCGCGGCACAGAAAACCACCCGCTCAGCGGGTGGAGGGCACCAATTGCTACGCAACAAAACACCCTCCCCTCTAGCATGGTGATTGTTCAGGTCGCCGGCCCCGAGGGGAAGGTGATTGCCGTGGCCCAGAAGGCCAACAGCCTCGCGCACACGAAGTGGCTCTGCAAGTACCACATCGTGTTCGCACCAAAGTATAGAAGGAAGGTCATCTACAACCAATACCGCAAGGACCTGGGGGAGATTCTCAGGCAGCTGTGCCAGTGGAAGGGCGTCGAGATCATAGAGGGTCACCTGATGCCCGACCACGCGCGCATGCCGGCCGGCATCCCGCCCAAGATCAGCGTGTCGAGCTTCATGGGGTACCTGAAGGGGAAGAGCTCGCTGCTCATGTTCGACCGGCGCGCGAACCTCAAGCACGAGTTCGGGAACAGGAGGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTATGCGGGGATGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGAATGCGGGGATGATCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [22-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //