Array 1 176230-173149 **** Predicted by CRISPRDetect 2.4 *** >NZ_FWGH01000006.1 Klebsiella pneumoniae strain VRCO0057, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 176229 29 100.0 32 ............................. TTGACCTCGCCGCTTCCGGCGTCGCCTACAAA 176168 29 100.0 33 ............................. TGCATCAGGAGTGTTGGATACTCAATTCCAGGC 176106 29 100.0 32 ............................. CCTACAGTCACAGCAGGCGGCCAGCACGTGGG 176045 29 100.0 32 ............................. CTCCGGGCGAATTTCGCGCCCGTCTACCGTCG 175984 29 100.0 32 ............................. TCGGAGATCAGCACCGACCACCACAACACCCC 175923 29 100.0 32 ............................. CACCACCATCATTAACCCCTGAAGAAGTGGGA 175862 29 100.0 32 ............................. TGTTACTAACCCTTCATGTGTGATACTTTCTA 175801 29 100.0 32 ............................. ATTTCTTCACCTGCATAGAGCAGTTGCGCCAT 175740 29 100.0 32 ............................. GCACCGTGGCCGCTGGCGACGATTACAGGATA 175679 29 100.0 32 ............................. TAGAGAATGCAGCCCGCGTGAGATCCATTGTC 175618 29 100.0 32 ............................. TGACGACACCTGACTGGTGCAGCGCCCGGTCA 175557 29 100.0 32 ............................. GGCAAGACGCGCAAAAAGAAAAATCATTTCAG 175496 29 100.0 32 ............................. GTGATCGGCCCGGCAATGCGTGAGCTAATCAA 175435 29 100.0 32 ............................. TTGAGTGACAGAGAGATTGACCGCCTTGTTTT 175374 29 100.0 32 ............................. CGTTTAACGCAGTGCGAAAAATTACGACACCA 175313 29 100.0 32 ............................. AACTGAATGTTCCAAATCCGGTTGGACGACCA 175252 29 100.0 32 ............................. TTCAGCAGCGCGCTCGTCCCCCTCCTGTCGGA 175191 29 100.0 32 ............................. CTCTACTACGATAACGGATCCCACGCGGGCTG 175130 29 100.0 32 ............................. GCTGCCAGCCCATTCCGTAATTGCCTGTTTCA 175069 29 100.0 32 ............................. TTTCTGCAAATCGAGTTGCCAGCGCGCCACGC 175008 29 100.0 32 ............................. GTGGAAATCAATTTTTGTTTTGGCCAGCGCGC 174947 29 100.0 32 ............................. GCCTCCTCCCGTTACACGGACGGCATTGACCC 174886 29 100.0 32 ............................. AGATTGAGCCATATCTATCACCGCCTTCGCCA 174825 29 100.0 32 ............................. ACCGGGCATTAAATTTGGTCTTCTCGTCCACG 174764 29 100.0 32 ............................. GCTGGCCGGAGTGTCGGTCATCGCCAGCCCCA 174703 29 100.0 32 ............................. AACAAACCGATCGCTCGATCAATCGCGTTAAA 174642 29 100.0 32 ............................. ATAATACTGTATACATAAACAGTATTTGAGGG 174581 29 100.0 32 ............................. TGCTGCGCAGACAATGGTCGCTATTTTGAAAC 174520 29 100.0 32 ............................. CCGGGCGATCATGTCCGCACAGTCAAACGCTC 174459 29 100.0 32 ............................. ATGAGTTCGTTCTGCCTGATAACACCCGCCGC 174398 29 100.0 32 ............................. TATACCGGCAATCACTGACGTCAACTCAGAAG 174337 29 100.0 32 ............................. GTACCGAGGTCAATGACGCTAACGGCCTGCAC 174276 29 100.0 32 ............................. CGCGCGCGCTGATCCTGGAGGGATACCGGGAC 174215 29 100.0 32 ............................. CTGAGTTCGTGACGTTTACCTGCGGGGAAGAC 174154 29 100.0 32 ............................. ATCCAGAGCTGACGGCATTCACGTTTGACGGC 174093 29 100.0 32 ............................. AGCCGATGCCTACAGTCACAGCAGGCGGCCAG 174032 29 100.0 33 ............................. TGTATTTCTCGGTATCCGTGGAGCGGTTGCCCC 173970 29 100.0 32 ............................. GCGAACATCCCCGTATAGGTGCCGTCTCCGGT 173909 29 96.6 32 A............................ GAGCTGGCGGTGTTTTTCTGTCAGTAGACGAT 173848 29 100.0 32 ............................. CGCTCTTCTGGTTGATGTGGCATGCCTTATAG 173787 29 100.0 32 ............................. CTCAGCCTTCACCTGCTCTTCCAGTTGAGCCA 173726 29 100.0 32 ............................. ATATTGAGGGGGTCTAGCGAGACGTCTAAGTC 173665 29 100.0 32 ............................. CCTGACGAAGACTTCGTTCGCCTCATGCAAGG 173604 29 100.0 32 ............................. CCACTCAAAAAAGGTCGAAGCCAAAAGGTTAT 173543 29 100.0 32 ............................. GGGAGCTTTCATTTGATCAGGCATTTGAGCAG 173482 29 96.6 32 ..............T.............. AGCGGCCGTTACGTAACTTTTCACGTAACAGC 173421 29 100.0 32 ............................. ACACGTCGTTAGGTGTTCCGTACTGGGAGAAA 173360 29 100.0 32 ............................. CCAGGCGACCGTATCTGGGTGCGTGAAACGTG 173299 29 100.0 32 ............................. CCGCAAGCCGTATCAACGAATTACTGCTCGAA 173238 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 173177 29 79.3 0 ...........ATTC..........G..C | ========== ====== ====== ====== ============================= ================================= ================== 51 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //