Array 1 1077834-1077438 **** Predicted by CRISPRDetect 2.4 *** >NZ_CADDWI010000013.1 Chelativorans sp. Marseille-P2723, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1077833 29 100.0 32 ............................. GATGTCAGCCAAGCCGGTGTCACATATTCGGC 1077772 29 100.0 32 ............................. TTGTCGACAAGCGAGGCCGGCAGCGGCGAGAG 1077711 29 100.0 32 ............................. CTGCGGTATTACCCGTGGTACGGGCGCGGCTA 1077650 29 100.0 32 ............................. GCTTGAGGGCGATGGCCGCACCTTCGAGGCGG 1077589 29 96.6 33 ............................G GCGGATGATTTCAGATCAAGAATGATGCCAAGG 1077527 29 100.0 32 ............................. CGTACAAAGCACGATTGCCAGCGCAAAGAGAC 1077466 29 89.7 0 .........G...A............T.. | ========== ====== ====== ====== ============================= ================================= ================== 7 29 98.0 32 GGTTCCCCCACGCGTGTGGGGATACGCCC # Left flank : AGGATAGAGGACAGGCGGTTGCCGATGACTGTGACACGCGGATCGTTCTCCGACAGTCCGTGCCTCGTGGCGAATTCGGCCGCGCATTCGGCTGTCGACATGGGGCGGGTGGCGGTCCGAAGGATATCTAACGTCATCTGGCGCTTGTTCGTCCCGCCGATGATCTTGTCGAGTTCCTTGATGCTCTCGGCCTTTGGCGGGCGGCTGCGACGTTTCTGAGGCTGCTCAGGCTTCCATTCGGGCTCGTAGATGGCGATCACCGTGTCGACGGCCGCCATCTGCGCCTGCACATCTGCCAGTTCCGCCGTCAGGTCGCGGATACGCTCCGCCAGTTCGCCTCGCTTCGCCTTCAACTCGTCAGAAACGCTCATCCCGCCGATCCCCTGGAACCAGGCCGCAGGGGATACCAGATCAGGCGTTAAACGTCTGGTGGCGGTTGCTACCTAATGGCGCATTGTTCTTTGACATTGTGGTTATAAATCAACTTACTGAGGGACAGA # Right flank : GAAGCCTTGACTTTAACCGATGGTTACTTGGGCCCCATCCTGATCGCCCCGTCTAGCCTTATCGTCTCACCATTGATCATGGTGTTTTCAACGATGTGCGCGACCAAGGTGGCGTATTCGCTGGGGTCTCCCAGCCGCGGCGGGAAAGGAACCTGCGCTGCTAGGCTTTGACGGTATTCTTCAGAAACCGTCATCAAAAGCGGCGTCAAGAAGAGCCCCGGAGCGATGGTGTTTACACGGATTGCCGAACGCGCCAGGTCCCGCGCGGCAGGCAACGTCATGCCGACCACGCCGCCTTTCGAGGACGCGTAGGCAACCTGCCCGATTTGCCCTTCAAACGCAGCAACGCTAGCGGTATTGATGATAACTCCGCGCTCCTCGCCGATCGGCTCAAGGTTAACCATCCGCGCCGCGACAAGCCTCAGCATGTTAAAGGAGCCGATCAAGTTCACTTTGACAACACGGCTGAACTCAGCCAGCGACAATGGCCCGTCCTTGCT # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCCCCACGCGTGTGGGGATACGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 1 386643-384831 **** Predicted by CRISPRDetect 2.4 *** >NZ_CADDWI010000009.1 Chelativorans sp. Marseille-P2723, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 386642 32 100.0 35 ................................ TGACTCTTGGCAAAAACGGTGATGAGGAACACCGG 386575 32 100.0 33 ................................ CTCGATATCTCACTGCCACTGGCCACCAGAACC 386510 32 100.0 34 ................................ AGGCGCGTGCCGATGCCGGATCAATCAAGACCAA 386444 32 100.0 33 ................................ AATAAACGCAATGCGCCGCCACTCTGCCCAGTC 386379 32 100.0 33 ................................ ATAAGTGCGACAGCATTGTTCTCATCGGGCGGC 386314 32 100.0 34 ................................ GCCAACAGCGATGGCGACGTTTCTTATTTTTCGG 386248 32 100.0 34 ................................ ACGCTGGCGCTCGACGCCCTGACAACGGAGCCTT 386182 32 100.0 33 ................................ CATGATGGCCTGTTTTTCGAGCGGCCGCGTTAC 386117 32 100.0 34 ................................ ATCCGATGTGGTGGGATCCTCTGACAGCAGTGTC 386051 32 100.0 33 ................................ CCATTCTCCTTCAGGGCGCTGGCGGCGCGAAAA 385986 32 100.0 35 ................................ TGGTGCTATTTCGACGCCGCTGTCGCCCCCGGCCA 385919 32 100.0 35 ................................ GCATTCAATCGCGTTCATCCTGCACCCTCCTTATC 385852 32 100.0 34 ................................ ACGGTTGGCGGGGCGGGCGGCGTTGACAGCCAGC 385786 32 100.0 35 ................................ AACAGCATAACCGAGATCGGGGCGACGGAAAGAGG 385719 32 100.0 35 ................................ TTGTTGAATACATTGCTCAAGGATGCGGTACGAGC 385652 32 100.0 35 ................................ ACCGAAGAGGACTTCGACCGGCTGTCCGGCCCCCA 385585 32 100.0 34 ................................ CTATACCGCTGGAGTAACCTCATGGTGGACATTC 385519 32 100.0 34 ................................ TGGTTCTCCTGCTGGGAACCGCCGCGATCCTCTT 385453 32 100.0 35 ................................ ATGGCTGGCCAGATGAGCCGGGAGGAATTCGGCAA 385386 32 100.0 34 ................................ AGATGCCACACCTCCGGCTCGTCCTGTCGATCCT 385320 32 100.0 33 ................................ GATCAGCCTTGCAAGAAGCTCGTCATCGTCCTC 385255 32 100.0 34 ................................ AATTCAACCGTCACCATGTTGTGCCTCGAACTCG 385189 32 100.0 34 ................................ GACACGAAGTCGCGGCACGTCTGTTCCAGCGCGC 385123 32 100.0 34 ................................ ACGACGAACTCCAGATGGAGATCGCGGCCGACCT 385057 32 100.0 33 ................................ AGAACGAGGAAGGCGAAGTTTATTCGGATTTTT 384992 32 100.0 34 ................................ GCTCTTTCTATTTCTGGGATGGAGACGGTAGGCC 384926 32 96.9 34 .................A.............. CTCACTGAGTTGAATGTGCCGGTGAGGTGCATGG 384860 30 93.8 0 ...................--........... | ========== ====== ====== ====== ================================ =================================== ================== 28 32 99.7 34 GTCGCCCCTCACGCGGGGGCGTGGATCGAAAC # Left flank : AGTAGGGTTTGCCGGATGATGGTGCTCGTAACCTATGACGTGAATACAACCGATTCCGGCGGCGCGAGACGGCTGCGCCGCGTGGCGAAGAGCTGCCGCGACTTTGGCCAGCGAGTCCAGTTTTCCGTCTTTGAGATAGAGGTCGATCCTGGCCAGTGGACCTTGCTCAAGAGCCGCCTTGAAGCCATCATTGACCCGGAGCGCGACAGCCTGCGTTATTATTATCTCGGCTCCAATTGGCGGCGGCGTGTCGAGCATGTTGGAGCCAAACCGGCAACAGATTTGGGGGGTATCCTCATCGTGTGAGACGCTCCCGGAGCCAGGCGCGAACCAGAAGCGTGCTGATGACCCCAGGTCGGTTCGCACCTGAGCCAGTACTTTGAAAACGTGAAGAAATTTGTACTGTGGTTTACGGTGGAGAAACCCCCGTGAACTGCAATCATCCTGTTCGCGCAGAAGGACCGGTTTCGTCATATTCCTCAATATGTTAAAGCAAGGCA # Right flank : TCTTGCTGGCTCAAAATATTCCCGCCCCTGCGAGAGCTACTGCGATTAAAGCTAGAAGATCGCGCGAATTTATTCTGGACGGATCGAAGCGAGCGAACCGGATTGAATCTGCGCAGGATCACGTACTACAACAAATATTCTTTCTCACTTTCACCCTTCGGTGTGGTATAAATCCGTAACATTACGGCGTCATAACCATCCTCAAAGGCATCGGATAATGTCGCAGCGATCTCGTATTTAACTCTTATCCATCAAGATCCACAACAGCGGTCCATTCTGCGCGATGCAAGAGGGGATATACTTGCGGGTTGCCCCCGCGAGCTTTGGCCGATAGGGCAGCAAACTCAGACGCTGTCTCCGGGTCAGTCGAAGACCAAACTCCTAGTTGTACAGGTGCTGCCCCGGTCGTGGCCCCTCCTAGCGCAGGGTCGAACGCCTCAAAAGCGGAGCTAGTCCCATAATAAAGGGGGATGTGTAAAATCCCATATCCCGTGCGCCGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCTCACGCGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.10,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //