Array 1 277511-279129 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALQJ01000028.1 Streptococcus agalactiae FSL S3-003 ctg120000984566, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 277511 36 100.0 30 .................................... CATACTAGCTTTCATGACTTTCGAACCTTT 277577 36 100.0 30 .................................... AACACAGCTTCCTCGAAAGGGATATATCTA 277643 36 100.0 30 .................................... AATATTGAAATAGTTTGTGCAGATGGTTTT 277709 36 100.0 30 .................................... TCCTCGCCGTCGACATAACCAGCCATTTCA 277775 36 100.0 30 .................................... AACGATTTGCACAATAATCCAGGACAATTT 277841 36 100.0 30 .................................... AAGTGTGTTATCATATCTTCCTTTGGTTTT 277907 36 100.0 30 .................................... AATAGGCTTAGGCGCATCTGGTTCTTTACT 277973 36 100.0 30 .................................... ACTATAAGTATTTTGTTTTATCCCTAGTAG 278039 36 100.0 30 .................................... TATCTACGAGACGAAAACAATTGCCAATGT 278105 36 100.0 30 .................................... AGTTATCAATGCTATATGGTTTCTCATCTT 278171 36 100.0 30 .................................... GTTTAATTTTGAATAATATCATGTTTACTC 278237 36 100.0 30 .................................... TATGTCATTGTGATTGTGGGAATACTTGTG 278303 36 100.0 30 .................................... GGCGAACTTGTAACGTTTGACGGTAATTTT 278369 36 100.0 30 .................................... TAATGTCTTTTCCTAGAATGTACATTTCTA 278435 36 100.0 30 .................................... ATTACTTTCAAGATGTCTATGACTATATGC 278501 36 100.0 30 .................................... TATTTCATCATAGAAAATCCTGCTAGTGGT 278567 36 100.0 30 .................................... CCCCCAAAGTTATCAAAGAAGATGACCATA 278633 36 100.0 30 .................................... TTTTATAAGTGATAGAGTGTGCAACACCGT 278699 36 100.0 30 .................................... TTAAAAGATTTAAACTATCAAGCGTCAATT 278765 36 100.0 30 .................................... TTCTAAATGCTGGTGACTGCTTTGCATAAA 278831 36 100.0 30 .................................... TCCTTTTTTAGATAATGTGCGATCACGGAC 278897 36 100.0 29 .................................... TTTTACCAATGCTTCCATATCGCTTATAT 278962 36 100.0 30 .................................... TACTTGACGAATTGAAGATGACGGAATTTA 279028 36 100.0 30 .................................... TGGTTATACATTTACTAATCCATCAGCATT 279094 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 25 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGCCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //