Array 1 1665605-1661798 **** Predicted by CRISPRDetect 2.4 *** >NZ_CDPW01000001.1 Bifidobacterium pseudocatenulatum strain CECT 7765, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 1665604 33 100.0 36 ................................. ATCGCGTCAATCTTATCAAGCACCCGTGAAAGCATG 1665535 33 100.0 35 ................................. ACTTAGCGAATTATTTGACACTATCATGTCACGAA 1665467 33 100.0 35 ................................. GAAAAACCGCCACATGGCGCGCACCCACTTGACCG 1665399 33 100.0 34 ................................. TACGTGCTCAGGTCATACGGCCATACGGTAGCCA 1665332 33 100.0 33 ................................. TTCAGGAGTTCCGGGTTCATGGTGTCTCCATTC 1665266 33 100.0 33 ................................. GTGCGGGAGCATTGCGGCGTATGGGTTGCACAG 1665200 33 100.0 33 ................................. ATCGATTTTGTTATTAGATGCACTAAGCAGTAA 1665134 33 100.0 35 ................................. AGCATTCGCCCGGCCACGGTGTTCTTGGTTTTCTG 1665066 33 100.0 35 ................................. CAGCGTCGTGCGCGCATAATCGGCCGCATGAACCT 1664998 33 100.0 34 ................................. CATACTCGCGCTGCCAGCCGTGATCTTGCACAAG 1664931 33 100.0 33 ................................. ACGGCGCGCATTGACCGTGAAAACTCGGCACGC 1664865 33 100.0 36 ................................. CACGCGCTTCCACCCCCTCGATACGATTCAAGTGGG 1664796 33 100.0 34 ................................. GCTAACGCCGTACTGTTTTGGACGGGCGAAGGCT 1664729 33 100.0 34 ................................. GTGAAGATAGAGATTATCGCCCTGCCAATGAATC 1664662 33 100.0 35 ................................. CGAACCTGCTGGTTGTGTTGACCGTAGCGAATGCG 1664594 33 100.0 33 ................................. ATAGAGAGCACCCAACTTTGGGTGCTCTCGCCA 1664528 33 100.0 36 ................................. GACATCGTTGAAAGAGTCATTGGACGGCGTGTTATC 1664459 33 100.0 34 ................................. GTTGTGGAAGGTTTTTGAAAATGTGTAGGAATGA 1664392 33 100.0 35 ................................. TCCCCGTACCCGTATGGGTCAACGCCTACGCGCGT 1664324 33 100.0 33 ................................. GTTGCGGTTTGGACGAAACCGCCGAAACGCTGA 1664258 33 100.0 35 ................................. TTCGGGGCAGGGTCTACGAAACCGTGGGCTACACA 1664190 33 100.0 36 ................................. ATAGAGAGCACCCAACTTTGGGTGCTCTCGCCACCT 1664121 33 100.0 36 ................................. CTGCTTGAACGGCACGGTGATTACGTATGAGCCTGA 1664052 33 100.0 34 ................................. ATAACTAACAATATAGTGTTTCCTTTGACGAAAC 1663985 33 100.0 35 ................................. TTCAGATCGTTCATCGATGAATGGGGGGAGCTGAA 1663917 33 100.0 34 ................................. CTTGCGGACAAAATCATCACCACGAAAACGCAGA 1663850 33 100.0 33 ................................. TTGGACGTGTGGTGATTGTGCTTATGCTGACTG 1663784 33 100.0 33 ................................. TTGGACGTGTGGTGATTGTGCTTATGCTGACTG 1663718 33 100.0 34 ................................. GATTTCGTACTTTTGGGCTTTGGAGGCATGGGAC 1663651 33 100.0 36 ................................. AATAGCACGCCCATTGTCAGGCCTCCTGAGAGGAGG 1663582 33 100.0 34 ................................. ATTGATTCGCGGCCAAGCGTATAGCCGCCGCCAG 1663515 33 100.0 35 ................................. ATGTATTGGTTAATTCGTAATGATTGCCGCATTTC 1663447 33 100.0 33 ................................. GTGGTTTGCGTGTTCGCAAGCTGCTGATTGGCC 1663381 33 100.0 33 ................................. ATATCTATCGGAAGAATTTGCGACATTACCAGT 1663315 33 100.0 34 ................................. ATGTGACCGTGAGGCCGTGGACTACATAGCCCAG 1663248 33 100.0 33 ................................. CAGAATCCACTGGGCCGTCACAAGATCGCCGGA 1663182 33 100.0 37 ................................. CCCAACGATGCAGGAAGTAGTTCACGCTGTCGTTCTT 1663112 33 100.0 34 ................................. AAACCGTGGAATATCAACGGCGAGCCAGTGCCCG 1663045 33 100.0 35 ................................. TCGCCGTCTCAGACCGCATTGTTCGCCGTGGTCGA 1662977 33 100.0 38 ................................. GGTCGAACGGGGCGCGAACGCCTACACGCTGCCGAAGG 1662906 33 100.0 32 ................................. TGCATGTCCTTGAGGACGCTCAGATCGGGCTT 1662841 33 100.0 37 ................................. TACGGGCATCCATTGGAAGCGTGGCTATTGGTGTCCG 1662771 33 100.0 34 ................................. TCCGTGCCGGACGATTGAATGCCGAGATATCCTA 1662704 33 100.0 34 ................................. GACATGATCGAGTTGCAAGGCCGCTGGTGTCTCA 1662637 33 100.0 32 ................................. TTCGACTGCCAGCGGTAGCAGTATTTGACCAC 1662572 33 100.0 35 ................................. TGTGTGATGACATAAATACTGCCGTCTTTTACGCC 1662504 33 100.0 37 ................................. ATCGACTGCGCCGGTTTGATGACGGGATTATGGAGTG 1662434 33 100.0 35 ................................. ACCCCAATACGCAAGGTTCGGAAACGTACGCCCAG 1662366 33 97.0 35 ....................A............ CTCGAACAATATGACGGCGACTATGCCGACTATGC 1662298 33 100.0 32 ................................. TTACAAGTATGCGATCTTTGGAGAACCGCAAG 1662233 33 100.0 34 ................................. GAGATCAATCGATACAGGCAATGTCACTTGTCCT 1662166 33 100.0 38 ................................. AACGACAAGACCTTCGAGTCGAACGTCGTGTGGACCCG 1662095 33 100.0 33 ................................. CGCAACAGCAGAGGGCGATGGATACGAGCAGAG 1662029 33 100.0 34 ................................. CGCGCGTTGGACCAAACCCGACGAGATGGCACCG 1661962 33 100.0 34 ................................. TGGCTGTACGACACGATCGACGTGACCGCGCAGA 1661895 33 100.0 32 ................................. TTGAGCATGCGGAGCATGACGTTGGCGGTCGT 1661830 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ====================================== ================== 57 33 99.9 34 GTCGCTCTCCTCATGGAGAGCGTGGATTGAAAT # Left flank : AATACCGATGAGGACAGCCTGCGCTTTTATAAACTTGGCGCTCGATATGCGGATAGGATTGAGCATTATGGACGTGAACGGAGTTTGCCGGTTAATGATGTGATGATGATATAGCACAGGCAAAATGGCATGGTGCCATAACGATATGGTGTGGGGTATGCTGGGTTGAGCGTTTGAGTGTGCCGTTCCGGTATTCAGAGTGTGTTTTCTAGCCAGCAGTATTGTGTTTTCGGCAAGGTGGCCGGTCTTGGAACGGTGTTTGTGCGAAGTGTAAGCGCTCATGATAAGGGACGTCTTTCGCACCTGAAAAACTATCGAAATCCGAATTGTGATTTTCGTGGGGCGTTTTGAAAACTAAATAATGGACATTAAAATGAGACAGAAAGCCAGTTGCTCGTTTTAGACATGTTGTTCGTCGTATCGGCGGTGTTGTTTGATATGCTTAAAGCTAGGCAGCTGGCTTGCGTCTCAAAAAGCGGACAAAAATGTCCAGCTGCACT # Right flank : CGGTGTCTGCATCGTTCTGGCCGCCGCGTGGATGTTGCTCTCCCTGTTTATGTCCAGTGTTCCCCGCACATGCGGGATTCCACATGTGCGGGACTGCTAGCAACGGAAAACCAGGGTTTTTGTCCGCTCGGGGCGACTTCAACGGTAATACGAGCAGGAACTGCGACTGGGTGTTTCGCATGGGGTCGCTTCTGAAAGCTATGTAAAAGAAATAGTGTATGTGAAAACGGTCGGGTGGGTGCGGATGCACGAGAAATTGGCTAACCTGTCGAATTTCTGTTTTACTTTGGTCGTTCATCTCGTGAGTGGTCGTCAAGCTAGACATATTGTGTCCCATGGGATGCAACATGTCATATGGAAATACATATGACTGGCGAATATCGCCAATGGTTCAGCCGGATAAAGGACCGGAACGCAAAAGCCCGAATCAGCGCGAGACTCCGATTGCGCTTCTAGATGGGGCGGCCGGTGGGTGACCTGCATACGGTTGGTGACGGGGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCTCATGGAGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.30,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //