Array 1 167-1954 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEXE010000152.1 Nodosilinea sp. LEGE 07298 NODE_152_length_16519_cov_14.7274, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 167 37 100.0 37 ..................................... CTTCGTTGCGTGGCTCCATCTCTTCTGACACTGACTG 241 37 100.0 34 ..................................... CCCTAGCTTGGGAAGTCGTATTCTTTAGTGCTAC 312 37 100.0 35 ..................................... AAGGTCATTGGAAAAATTTCGAGGGACCAGGAGGG 384 37 100.0 39 ..................................... CTCTTCCCGCAGATCTCTTTCGCTACAACACTGCGGTCA 460 37 100.0 36 ..................................... TTGAAAGCACGGAGCCAGAACAACAGCCACTGAGAA 533 37 100.0 35 ..................................... CAAATATCAGATCCGCAGTGTGAAGCACACGCTCG 605 37 100.0 36 ..................................... CTCTGGCGTCTCCCAATTCCGCAGGGCAGCATCTAG 678 37 100.0 42 ..................................... CTTTCAGCTTTTCAAGGGCAGCGCTTTCGTCGGCTCCGTCCT 757 37 100.0 35 ..................................... CGGGCTGTCAGAACTGCTACGCCATCAAAAGCGCT 829 37 100.0 37 ..................................... GCGGCACCGTAGGCAGTCCCACCGGCTGGTATAGCGA 903 37 100.0 35 ..................................... CGATGCTCCACCGATCGCGATCGCTAGGATATTGC 975 37 100.0 34 ..................................... CAAGTACCTGTCTCCGAGTCGCGATCGAAGTTAA 1046 37 100.0 37 ..................................... TTTATTAAATGGCTTTTGGAGCAGTTGCTTCGTCCCG 1120 37 97.3 34 ...................................T. ATCTCAACTGTAGTCAACGGGTCACCTCAGTTGT 1191 37 100.0 36 ..................................... CCAAATTGTTAGCGCTGTTCAGAACGCTGAAGATAT 1264 37 100.0 36 ..................................... GGGTGATGATCTCTTTACCGAACAGATCCGCGATAA 1337 37 100.0 34 ..................................... CCTACTCGGGCATCAAAGTCAACGCCGCCGTGAG 1408 37 100.0 36 ..................................... CAATGGGTGCAGCCGCAGCAATAAACGGATTGCCTG 1481 37 100.0 36 ..................................... GTAAATGATGGCGGTGCTCACCCTGGCCAGGTAGCT 1554 37 100.0 36 ..................................... GTATCAAATCTAAAGCTCAAAAGTATCTGCAAATGA 1627 37 100.0 37 ..................................... GCGTTCGGGATCAGTCATAAACGCTTTGATGCGAGGA 1701 37 100.0 36 ..................................... CATGTACTTTATAAATAGCCGTGATCTAGCGCTTTA 1774 37 100.0 35 ..................................... ATCAAGTCGGCGGTGTCTTCGTCGCGGACCAAGAG 1846 37 100.0 35 ..................................... TCATCTCTGGCCTGACATTCTCGATACTTGGTCAG 1918 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 25 37 99.9 36 GTTTCAGTCTCGTTGCCGAGATTAGGTGGGTGGCGAG # Left flank : ATACCTTCAGTGTCTTTTCTTATTAGCTTAAATTGGATCCGGTCTCAGTGATGACTCAAGGGGCAGGGAGAACACCTCTCCCGCCTATCTAGCTGTCGTCACCCGCCACGTTCAGTGTCGTCTAATAGAGAAGCGCTCCGTCTGTCCCTCGCATATTGCCTGCGGTG # Right flank : GGCTTGGCCCCTGAAAGCCTTTGCTATCAAGGGTTGTACCGTCCAGTTTGGCAAACCTACTGAAATGGGTGCCAAACCCTATCGCTAACTTACCCGCTAGCACCGGGTGGTTGCCAGAAAAGTATTGAATTTTCAAGGTTCTAAGATTTTGGCAAACCCCCTAGGAAAATTGGGCTTGCTTAGGTTTGCCAGAAAATTGTCGCCCCTCCATCATAGGATGATAGCCTCAGGCTGGCGCGGCTTTTCAGAGCCGTAGGTCAGCGATCGCTTCACTGCCCCAGTATCAAGAACGTAGACCCTCACCGAATCGGTCTCTGGCTTAATCAAGCGTTCTAGCTGCACCTGTAGCCGTGCAAACTGAGTCGCCGTCAGAAAACACTCAAACACACTGTACTGAGTCCACTGTCCATAGCCAGACAGCAGCTTATGAAGACGGTTCCGGCGTTTGTTAGCCGCTTTGTCGTCAGGTAAGTCGTAGATGATGAGGTAAAAGAGTTTTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGTCTCGTTGCCGAGATTAGGTGGGTGGCGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.00,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [45.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 1 38217-37811 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEXE010000002.1 Nodosilinea sp. LEGE 07298 NODE_2_length_69214_cov_14.7198, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 38216 37 100.0 35 ..................................... AACCAGCAGGAGTAAAGATCAAGCCAGCAACCTCT 38144 37 100.0 37 ..................................... TTGGTCTTGCCCCCTAGCTGAGGTAGCGGGATGTAGG 38070 37 100.0 37 ..................................... CTCGCTGGGCCTAGCCTGTGGAGCGGCGCTGAGGTTA 37996 37 100.0 37 ..................................... AATTCCCTCGCGGCGAGCTATACACACTTTAGTTAAA 37922 37 100.0 38 ..................................... GACTACCGCCGCGAGGGCGACCCAGGCGAAACCGAGCC 37847 37 86.5 0 ......T........C.........A......T..T. | ========== ====== ====== ====== ===================================== ====================================== ================== 6 37 97.8 37 GTCGCACTGGGCTTCTACAGCCCATGAGGATTGAAAC # Left flank : AATGAGGGCTTGTTTGACTGCGAGATAGCAGCCTTACTTTCTGGCCCTGGCAGGCTGGCACTGGACTGCTAAAGTAAGATGCTTGTTAGAACGCTTGCTGCCCAAGGGTTTTGGACAGCGAGAAATCAAGGATCATATTTTTAGAGACCAGTGCTGGCTACTGACCACTCCGATGCTGCTGTTGTAAGTGAACGTCTGGAATCGGGCACCGTGCAACAGGATAGGGGCGCACCCAGCAAGAGAGGACGGACTTACTGTAGTGTTGGCTGCCAAAACAACTCCGACCGAGGAGTAATCCATGCACCCATATCGATATCTTAGCCTCCGCGAACCCCAAGCGCAGGACTTTTTCCTGGCAGGTTCGCGCAGCCTGAAGGCCTTACCCGCTGGCATTTCGATGCTGTACGCCGTGGTCTGGCCAGTTAATCAGGTCGTAAAAAGGCAGGTTCGCGATCGAAAGGGCCAAATGGCCCGCGAACCAAGAGTTTTGAGTGGGTGCT # Right flank : AAAGTTCCAACCCATTGGCCCATTCTGAGGCAGTAATATCTACAGCTCTAAACAAACCATATAACCGTAATGGTTCAACCAAACTATCATTTAAGAGCATGGACTGAAACGAATCCCGCCATCTCGATTAGGCAAAGCACAGCTGAGAGACACTAATTCCGGAACGCCGACACTAATTCCGGAACGATGACAAATAATTCCGGAACGTGCAGCTACAAGGCGCTTCCGCAGTAGGTTTTAGAAGAATCGGGATGGCGGGATTCGAACCCACGGCCCCTTCGTCCCGAACGAAGTTCAGAAAATCTTCTAACCCTTTCTGCCCCTTGATTATAGCGGTTCTCAATAAACCGTCCTACCAATTTCCTACCGCAATCTGCTCAAAGGTTTGCTCGACAATGGGGATGAACCAGCTTTCGGGATTGCTCCCGAAAGCTGGTTCTAGGATCGCAGCGCGTGTCGGTTAGCGCTCTACTGATTTACAGAACTAGCCGCTAGGGCTT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:0, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTGGGCTTCTACAGCCCATGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.30,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : NA // Array 1 14625-14082 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEXE010000114.1 Nodosilinea sp. LEGE 07298 NODE_114_length_18806_cov_14.3166, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 14624 37 100.0 34 ..................................... GTGAGGAGGAAGCGGCTCTCCGCCGTGTCGTACA 14553 37 100.0 36 ..................................... GGAGGAAAACTATCGAAACCTGATGAACGCAAGGCC 14480 37 100.0 35 ..................................... ATCGAATACGACAACCGCTGGGACGCGACCACCAC 14408 37 100.0 35 ..................................... CAATTCGCCACCGACCTCATACAGGGGCGGATCGA 14336 37 100.0 35 ..................................... CAGCTGTACGCTTGAGCCTCGAACGTTTCGGTTTT 14264 37 97.3 36 ..............T...................... AAGCGCCACAACCTTGATCAGCCCAGAGACGCCCTA 14191 37 94.6 36 ...............A.............A....... GAGACAAAAGCCCAGGTAACCCCGGCCAAGGCGTCC 14118 37 97.3 0 ...................................G. | ========== ====== ====== ====== ===================================== ==================================== ================== 8 37 98.6 35 GTCACAATCAACCACCCTGGACAGGGGAGGTTGAAAG # Left flank : AAAAGCTTTGAACCTGGAAAACTGAATAGTTCAATAGCGCCGCGACTCATGCTTTGGCCTCTGAGTCGTGTGAAATAAGGGTTAGTTTGGCTGTTGGAATACAGCTGTGCTTTCTGACCCTGGTAGCTACTCGCCCCGATGCTGTCGGACGAGAGGCTTAGGCTTCTCCGAAGAGATTAAGTCGTAGTTGACGTGCTAGTAACCTCAATTATGGCGTAGGTGCGCTCCCAGCAATAGGGGTGCGGATGTACTGCTGTAGCGGCTACCGAATCACCCCCAACCAAGGGGGAACTCGCTCCAACATTGGGTTTGAGGGGCTTTCGTAAGGTGAAATTATCCTTCTCGACCCGCGCAAAATCTGAAATACCTATCAGACGGGCATTCCAGGTCTTTGTAAAGGTCAAAAGATCTCTAATTAGCCAGTGCAGTCGGGATGGATGAGTCGATCCGCGCAAATGACTTCTGAGAGCCTTTATTTAAGTGCCTTTGAGGAGCCTGCG # Right flank : ATTAGATTCAGGCAAATCTAAAGCGAGTTGAAAGAAGGCAGTGGATTGTGATTCTTGAATGAACCCACATCTAGCCACCGCTACAAGACAGTAAGCGACACTTATTTTGTCACTGCCGCTTCAACGACAGCAATGTGTCTCAATAACACTAGTTTGTCACTGATGACAGCAATGTGTCACTGATGACAAATAAAGTGTCACTGTACAACAAAGGGCGGATGAAGGGGATCGAACCCTCGAATGGTGGAATCACAATCCACTGCCTTAACCACTTGGCTACACCCGCCATAATCGCGTTAACTAATATAGCACCGAAGGCGACCACATAACCAGGGAATGTTCAACTTTTTGGCTGATGATGGGTGAGGGTGTCAGACCTTACGATCCAAACCAGTGGATAGGCGATCGCCCGTCGTACCTTCGCCGTCGACTCATCCACTACGGTGAGTTAGGCCGTACTGCGGCTGTGAGTCAATGGTCTTTTGCCTATGTCGGTTTCG # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAATCAACCACCCTGGACAGGGGAGGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.60,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA // Array 1 2264-3287 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEXE010000466.1 Nodosilinea sp. LEGE 07298 NODE_607_length_3442_cov_14.3403, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================================================== ================== 2264 37 100.0 41 ..................................... TTGAATTCCTTTCGCAGGCCTAGCTAGATAAGCAAGACCAA 2342 37 100.0 69 ..................................... CCTACTGCTGATCCGCTGCATCCCCTGCGTGCAGTCGACAACATCGAGACGCAAGCTTTCACGTTCCTA 2448 37 100.0 35 ..................................... TCCCTCACAGGCCCAGGCCGATCAGCAGGATGGAT 2520 37 100.0 38 ..................................... GATAAACAATGGGGCATTACCATAGGCGATCCTTTCAT 2595 37 100.0 35 ..................................... TCCAGGGTGGCTTTTTCCAACATTACCGAGGTGTT 2667 37 100.0 35 ..................................... TCGGGTGTCGGGTGGTTCGTAGCTGTTGCCGTCAT 2739 37 100.0 36 ..................................... CGACCAGCCGATCGCCCTCAAAGGCTACCAGGGCGA 2812 37 100.0 37 ..................................... CATCGACATCTTCGCGGCCCAGAAGAACATGATGTCC 2886 37 100.0 35 ..................................... CGTCGAGGGCTGTCCAACGATGTCGTGTGCATTGT 2958 37 100.0 37 ..................................... CTGGCACGCCGTCGGTGGGCAACAATCTGGCGGCTAG 3032 37 97.3 37 .................A................... TACACAACTTCACTGCCTGCCCCCACCGCCCCGGCTG 3106 37 100.0 36 ..................................... CTATGCCGGTGGGGCGTACCCGTCGATCGCTGAGTA 3179 37 97.3 35 ..........................G.......... GATTACTTGGGGATCTTGAACAATAGGAGTCAGGC 3251 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================================================== ================== 14 37 99.6 39 GTTTCAGTCTCGTTGCCGAGATTAGGTGGGTGGCGAG # Left flank : CCATTGCCGCTAGTGTAGGTCGTTCCGAACGCACTGTTCGTCGCCGCTTGTCAAACCAGTACCGGGAAGCACTTGCAATCAGACATCAGAAGGATCTTACAGTCCTGAAAAGAACGCAACTAGCTTTAAAGACTGAGATCTCGCCAGAAATGCTTCGGTTTCAACGCTCTGAATCTTTTAGTCAAGATAACTTCTTTGAAGCATTTGGACAGGTTTGGCGAGCAGGTTGTAATGTCTACTCGTCAGATCTGCAAATCAAAGGTCAGAGGCGCGTGAATAAGCATGTAACTCGGTTGGAGGAATCTGTTGATCTGTTGGAGGAGTCTACTCCGCTGAAGGAATCCCTTGGTTCGTTAACAAATGAAAAAGATAGTAAGGCATAAGAGATAGGTTACTTTTACGTGCTCTAGCCTATCGGCAAGAAACAGCTAAATACGGTTGCCGGGATTGAGAGGATAGCGAGAAAGTCGCGCCAGTTTGTAGCATCCGTATTCTTCGCT # Right flank : TCGTATTGAGGTATTGCAAAGAACAGTCCTAGTTCCACCCAAGTTTGTGTCGAGTAAAATAGGGGTAGAGCGCTTAGGAGGCCAACGTGATGGCCAAGCAACGACGGAAGCGTGGAACCGCAGGCGATAAAACGATTTGTCTTCCCATTGCAGAC # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.17, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGTCTCGTTGCCGAGATTAGGTGGGTGGCGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.00,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA //