Array 1 67335-64195 **** Predicted by CRISPRDetect 2.4 *** >NZ_SACS01000013.1 Rheinheimera riviphila strain KYPC3 NODE_13_length_145693_cov_108, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 67334 29 100.0 32 ............................. GCCTTCTTTAACAATCCCTCTGCTGTGGCGTT 67273 29 100.0 32 ............................. CCGTACTTCGTGACAAGGCTGGTGGGCTTGAT 67212 29 100.0 32 ............................. TAGAGCGTCGAGCAGATAATAAAATGCTGGAA 67151 29 96.6 32 ............................A CATGAGCTGGATATCACGATTGACGCGTCTTT 67090 29 100.0 32 ............................. GCCTGAGACTCCATTCAGAATTGCGCCGGTAG 67029 29 100.0 32 ............................. GAAACAATGAAACCAATAACAGAATTAGTTGA 66968 29 100.0 32 ............................. CAGGTAGCAACATTGCTGGCACGCGCCTTAAC 66907 29 100.0 32 ............................. GCTTCATCGTTACCGAAGAAGCGCTGGAAGAC 66846 29 100.0 32 ............................. TGGCAGGGCGCACCAGTCCTGTCAGCTGGCAA 66785 29 100.0 32 ............................. GTTAAAACCAGGAAGAAAAATGGTAATCGGAA 66724 29 100.0 32 ............................. CCCTGACATCATTACAGATGGAAATAGTTAAC 66663 29 100.0 32 ............................. TAAATCAAACCAAAATACATTGAAGGCGTTGA 66602 29 100.0 32 ............................. GGCATGCAGTCTGGCTGCAATAGTCCTGCTGA 66541 29 100.0 32 ............................. CCGTCAAAGATTCAAGAGGTTGATATGACACG 66480 29 100.0 32 ............................. TTATTATTGCAGCTTGCTGATGTGGCGGTGGG 66419 29 100.0 32 ............................. GCCGGTTTCATGCTGGGTAAAATCCAAATCAT 66358 29 100.0 32 ............................. TGGTTCAAACAGTTGGTGCCAGCAGAGCTTGG 66297 29 100.0 32 ............................. CCCTCACTCGTCACAAGGCCAGCCTTGCGCCC 66236 29 100.0 32 ............................. TCTTCAGCGATTATGAGCGGATGATTAATGGC 66175 29 100.0 32 ............................. AATATTCTGAGAATCGCCGACGCGAAGCTGAG 66114 29 100.0 32 ............................. CAGGGCTATGGCAAAAAAGCGGCTGAACGATA 66053 29 100.0 32 ............................. GAAACAATGAAACCAATAATAGAATTAGTTGA 65992 29 100.0 32 ............................. ATGGGGCTTTTCTTGATTGCTCGGGTGAGCAC 65931 29 100.0 32 ............................. GCCGTTGGCGGCGTTCCATGATGTGTTAGTGG 65870 29 100.0 32 ............................. GCGTGGTCTGATGTCCAAGCGGCAGTATTGAC 65809 29 100.0 32 ............................. GGAAATGCCTTGGTGCATAGGTACGCGATCAT 65748 29 100.0 32 ............................. CCAAGCGGGTCTGAATGTTTGCTCATCTGAAC 65687 29 100.0 32 ............................. GTCAGGGCGGCCGAGGCATCCTGACGTTTACG 65626 29 100.0 32 ............................. TTAAATCCCGCAAGTGACAAAAATTTTGTTTA 65565 29 100.0 32 ............................. CACACTGCCAGCTGTGGATTGACCCAGATGAC 65504 29 100.0 32 ............................. CTCCTGAATCTGAGCAATAGCACGCTTCATCA 65443 29 100.0 32 ............................. CGGCTCCCGCCAGCGTCAGATTCAATCCATAA 65382 29 100.0 32 ............................. CCCCAGCAGCAAACCCCATACTATCTGAGCGT 65321 29 100.0 32 ............................. CAAAAACTGTTAAAAGTATATCATCCATATTA 65260 29 100.0 32 ............................. CGTATCCAGAAATTTACTAACAACCCGATGCA 65199 29 100.0 32 ............................. CCGGTAAATTAACTAATTATGCCGAGAATAAA 65138 29 100.0 32 ............................. CATATCATCCATATTATGCTGCTCCTACGCCG 65077 29 100.0 32 ............................. TGGCGTCGGGTTGTAAAACGGGTTTGGTTGGT 65016 29 100.0 32 ............................. AGCAGCTGCTGGCGGGGTTCCCTGAATGGCAG 64955 29 100.0 32 ............................. AGGATTATCCAGCCGCACACAATTCCATTTTC 64894 29 100.0 32 ............................. CAACAGTTACTGCAAAGGACAGATAACTTAGA 64833 29 100.0 32 ............................. CAAATACCCGTTTAGGTAATTCGGGTAATCGT 64772 29 100.0 32 ............................. CAAGACTACCAGTTGGATGATAACGACGAAGA 64711 29 100.0 32 ............................. GCAGCATTTCACATCTTAGAAGACCTGCTATT 64650 29 100.0 32 ............................. GACATGGCTGATGCCCGTGCAGTCGACATGGT 64589 29 100.0 32 ............................. TAAAAACCGGACAATCATTGGGGCTGGATGAA 64528 29 100.0 32 ............................. TAATAACTCATAATTATTACTTGTTAGAATTG 64467 29 96.6 32 ..........T.................. GTTGTTTCTGTATTCGGTGGCGGTTATCCGGT 64406 29 96.6 32 ..........T.................. ATTGCTGCATACCTGCAATCTCAGATTGACAT 64345 29 96.6 32 .........A................... CCTTTACCGGAGGTATCGTCAAGTTCAAATCG 64284 29 82.8 32 ...........G...T.......C.C..T TGGCTACCTTTCACCTAATCATAAATATTATG 64223 29 69.0 0 .T...T..A....A.T.A...T...T..A | ========== ====== ====== ====== ============================= ================================ ================== 52 29 98.8 32 CCGTTCCCCGCATGGCCGGGGATAAACCG # Left flank : AAGACATTCTGGCCGCGGGTGAAATTAAACCACCAGAACCATACCCGGATGCGCAGCCCCCCGCACTCCCTGAACCGCCATCAATTGGCGATGCTGGCCATCGGAGCGGTTAATTATGAGTATGTGCATGATTGTGACCGAAGCAGTCCCGCCGAGATTACGTGGTCGATTAGCCGTGTGGTTATTAGAAGTACGCGCAGGTGTGTACGTGGGTGATGTCAGTCAGCGCGTACGAGAAATGTTGTGGCAACAAGTAGACGCTATGGCAGAAGACGGCAACGCCATTATGGCTTGGGCCACCAACACCGAATCAGGTTTCGACTTCATCACCTACGGCAAAAACCGTCGTCAACCTGTCGATTTTGATGGTTTAAGGCTGGTCACTTTCCTGCCTGATGACGCGCAAAATTAATCATTCACTTGCTCTTTAAAAATCCGGAAAATTTGGTAGAAAAACATAGCCTGTTTTTTTGTTTTAAAATCAGGTATATACTTTTAGT # Right flank : CGCGAGTAAAGGTCATGCCGCTTGACATCATCCGTGTCGAAGACGGAATACCGCTGTGGCAATACAATGTCTGATTTTGGTATCGATGATTGCAGCGGGATCGTCAGGTAAATCGAAACAAAAAACAACCGCACGCTGACCCGTGCGGCACTGATAAAGTTGGAGGTTTCGCGGTCAGAAACAGACCTATATCAGCCTAACTCGTAGTTTGAGGTAAAAACCCCAAGCCGGCTCTTGGGCAACCGTGGTGTTTGGCGGCTCTATTGCCGGGAGCCTATCCACCATGGCGTTGCCAGTATAGGAATTTTCATGGCGAACGTAAACGTCGTCATCAATTTCGATGCGACAGTTAAGTTGGGGCATTTTGATAATTTCGAGGTTGAGCGTGCCAGCCCAATCGTAAAAATCACTATGCACATGAAAATCCTACCACCCTCAATGTTAAAAAATTAGAGGTACTGATTGCGTTGTCGCAATGCAATTTAGATCGTCGCCTCGAG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGCATGGCCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CCGTTCCCCGCATGGCCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.60,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //