Array 1 2892-613 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT635811.1 Bacteroides ilei strain Marseille-P3208, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 2891 29 93.1 36 AC........................... GAATGATATATCTAGTGGAAATAAAATTAAAGTAGA 2826 29 100.0 36 ............................. GCCGGGAGTAATGAAGTTCAGATATGCTTTACAAGC 2761 29 100.0 36 ............................. TATTAGCGAAATCGAGGATAAAGTGGATTCACTCAC 2696 29 100.0 36 ............................. GTAAAATAACAATTCTCCTGAAATGTACCATAACCC 2631 29 100.0 37 ............................. GTCGTACTTTTTATTACAGATTGTGTAACAAAATGTC 2565 29 100.0 37 ............................. CCGATAGAATCTTCCAGAACTGATGAAAGGCTTTGTT 2499 29 100.0 35 ............................. AAGTGGCAGAATGGTATGTATCTATGGTCAAGACA 2435 29 100.0 35 ............................. CATCTATGTATCTTACTTCAAGTGAGCCGTTCACG 2371 29 100.0 37 ............................. CATCGTGTATCGGCGCATAGAACTTCACGCTGTATTC 2305 29 100.0 36 ............................. AGAAGTTAGAATGTAAGCAGAAGACACCGCAGGCTG 2240 29 100.0 36 ............................. AAGGTAATAAACGCAATATGAAATCATAAAAAGAAG 2175 29 100.0 35 ............................. TTTATCATCTGAAGTATTTGTAGCAAGTTTGAGTC 2111 29 100.0 35 ............................. ATGAAATCTGTAATAGAAAACAAATCACGAACAGA 2047 29 100.0 35 ............................. TCGACAGCCTGGGCAACCTTCTAGCGAAGATGAGA 1983 29 100.0 35 ............................. TCCCATGTGCCGGTGAACTGGAATATCTGTGAATC 1919 29 100.0 37 ............................. GACAGAAAGGTGTTCCTGTTTGGAAACAAGTTGTGTC 1853 29 100.0 36 ............................. ATCTTACTACTTACGTGCAGTACAACCCGGATACGG 1788 29 100.0 34 ............................. CTAGAAAGATTTATAATAGGTTCGGTGTAAAAAG 1725 29 100.0 36 ............................. CACCTTACCGTCTTTCATCAAGCAGGGATTTTGGCG 1660 29 100.0 35 ............................. GCCATTTTCAGGCCTGTGCAAGCTGGAACTGCATT 1596 29 100.0 35 ............................. AGACCATCGTCTGCGAGAGGCTCTATCAATATGAT 1532 29 100.0 34 ............................. GACACACGCCAGGCCGCCGGACACACGCCAGACC 1469 29 100.0 37 ............................. TCATCTTTTCGTTGTGCTGGCTTTTCTGCCGGCTTAC 1403 29 100.0 37 ............................. TATTTCCCGGATTTCTTGTCCAAAGCGGCGGAGAAAG 1337 29 100.0 35 ............................. AAGATTTTATCCCAGTCCATCCCTTTCTTCATTTC 1273 29 100.0 35 ............................. ATGGCCAGTTTGGAAGAGAAATTCTAAACGGGTTA 1209 29 100.0 36 ............................. TTTCTCTCTTTTCCACATAGCTGAAAGTTCCGCTAT 1144 29 100.0 35 ............................. GGTGAGACGGCTGTCATCAAACCCGTGGCTCGTAA 1080 29 100.0 35 ............................. TTGAGGCTGTTCACTGTGTAGCGCATTACCCCATC 1016 29 100.0 34 ............................. AGGACAAAAACAGCAGAACCCCGTCAGTCTTTTG 953 29 96.6 34 .........A................... TACCGGGACACTATAAAGTACGAAAGAACACTGA 890 29 100.0 38 ............................. ATCAATGACGTTCATCAAAGCTGTTTCGTTATCAAACG 823 29 100.0 35 ............................. TTTGCAAATCAAAGAATAAATGGTTTTGTGAAATA 759 29 100.0 35 ............................. TCTGAGTTTGAGCCTTTTTTTACGGCATTCCCTTT 695 29 93.1 25 A...........................A CATCGGGATAAATGAACTAATGAAA C [668] Deletion [642] 640 28 75.9 0 ..CC...C..........AC.-..C.... | ========== ====== ====== ====== ============================= ====================================== ================== 36 29 98.9 35 GTTTTAATCGTACCTTATGGAATTGAAAC # Left flank : AACTGATATAAATTGTAACATATGGGTTCAACAAAACAATAGCGGCTGATACTATTAGGTTCATAGTGACAGTCGCTATTGTTGTATATAAAGGTTTAATACCTGTAGTTGGCCGAATACT # Right flank : CGAAATACATTCCACCTCAGCCGCATACCTCTGGTCTTATACGGAAAACACCTTGCCATCCCCCCGCAAACACCTTGACGAATTACCCGGAAGAACTTCATCTTTCCGGGAAAAGATGCTGACATTTCCAGGAAACGCCTTCATCTTTTTCCGGGGGTACCGTTCCACGCCCCGCAGGCAGCCGGAAAAGCGGCCTTGCACCTGCCGGCCAGGCAGGGTACGGAACGGCGGGATTCCAGGGTACTATCAGAACTATCAAAACTATCACCTATACATATTCTTATACCATGAATGACCCTTCTTGATGTACATATTCCCCTCTTTTTCAAGGTATAAATCCTGTTTCGCCTCCCTCAGTATCCTATCACCGGTGGCTACGGAAACACCGTTCTCCACACATACCTTGAGGAAATCGGCGCGGGTGAAGCGGGTGGGCATCTTGCCCAGCACCACACGGTACTTGAAGTAGTAGTTCATCTGCCGGGGTGATAGTATCGGTC # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCGTACCTTATGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [11-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA // Array 1 1030383-1027562 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT635801.1 Bacteroides ilei strain Marseille-P3208, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 1030382 29 100.0 34 ............................. GATATCAATTCTATCAATAACCGGTTCACTCTGG 1030319 29 100.0 36 ............................. ATGACTACCAATACGCAAAGGGAGATTGATGTAACG 1030254 29 100.0 35 ............................. ATAGAAAAAGAATTGAATTGAGATGTGATTTATTC 1030190 29 100.0 36 ............................. TGGTAATGACGAACTTGAACTTGTCGGATATATACT 1030125 29 100.0 37 ............................. TGAAAATACTTTAACAGTTGATTTTGCAGCCATTAAT 1030059 29 100.0 35 ............................. TCTATTTTCTTTTCTTCAAACTGCTTGCTCGGTTT 1029995 29 100.0 37 ............................. GTGGCTAGCAGTAGGTCAGATGGTTGAAGTGGATTAT 1029929 29 100.0 37 ............................. GCGTGCCGCCAGCCGGGCTCCGGTGCGTGCTCCCCCG 1029863 29 100.0 34 ............................. TTTGCTATCTGGAATGAAGCTGCCTGCCCTTCTT 1029800 29 100.0 34 ............................. GTGGTTGTTCAACAGATCTGAAGTTTTCTGCTGA 1029737 29 100.0 37 ............................. CGAAGCTATACGCAGGCAGTTCAACGCACCAAGATGA 1029671 29 100.0 36 ............................. AAGATGAGGCGTTTCAAGATCAACCGGGAAAAGGTG 1029606 29 100.0 36 ............................. GTACGTTTATGACCAGTTTCAGTATATCCTTCCAGT 1029541 29 100.0 36 ............................. AGGAAATAATTTGATTCACCTTCCGGGTCTCTCAAT 1029476 29 100.0 37 ............................. ATTCACATTTGTAAATTGCGTCACGCACTGAATCCGG 1029410 29 100.0 36 ............................. GCAAATTGTTGTTGTCGGTGACGGTCAGTTTACCGG 1029345 29 100.0 34 ............................. AACGGTAAATACACGTTTGAACAACGGTGTTTCT 1029282 29 100.0 36 ............................. ACTTTACAAATGGAAACGCAAAGGTGGCTTTTCGGT 1029217 29 100.0 36 ............................. TGAACCGGTATGCCTTGAAGTTATCCAGGTACCGCT 1029152 29 100.0 35 ............................. GTAGACATGTTCAGTATATCCATTCCCTCTGCCTT 1029088 29 100.0 35 ............................. AAGGTGCAAATAATATTCGAGCGGTGCAACACCGG 1029024 29 100.0 36 ............................. AGGGGGAGGGTATTAACTATAAAGCCCGCTCCCTTT 1028959 29 100.0 37 ............................. GGGACTACAGTAGATTTGTCATCAACAACTCTATATA 1028893 29 100.0 34 ............................. TTATGATATACTAATAGTATTACAACCGCTCTCG 1028830 29 100.0 35 ............................. TAAAGCAAATGTAATAAAGTTGGAGACTAAAGAAG 1028766 29 100.0 36 ............................. CCTCCACCCGGCTGGCGCCCCCCTTCGTTTCGCTCC 1028701 29 100.0 38 ............................. TGAAAATGAACTGGAAGGATATACTGAAACTGGTCATA 1028634 29 100.0 37 ............................. GCAGTAAGATTACCTCCATATCCTTCGGCTCCGAAAA 1028568 29 100.0 34 ............................. TGTCGGAAGATGGCGGTAAGAAGAACGATGATGA 1028505 29 100.0 37 ............................. ATGCATATCTATTGATATATAAGGGGTGATCGTTTCT 1028439 29 100.0 36 ............................. ACTGATATACGGTAAATAAGGAATGATAGTAATGCA 1028374 29 100.0 36 ............................. TTTGTATAATCAATGCGTATCAATAGCACAATTATC 1028309 29 100.0 37 ............................. AATCTGCTGCAAGCACATTTCTTGAAAATCAGTCAGA 1028243 29 100.0 38 ............................. ACAGGATTGATTGCGGACGCAGAAGCTGTTGTTGCACA 1028176 29 100.0 35 ............................. ATTTCGTCAGTTTATCGTCTCAAAATTTCACGATT 1028112 29 100.0 36 ............................. TGGAGGAGGTAAGCACGTTCTTCAGCTCCGCGCTGT 1028047 29 100.0 37 ............................. TAACCTTAGATTTATGCTCTGCTGTCTTGTTGTAACA 1027981 29 100.0 36 ............................. AGGTAAACGAACAAAGGGATGAAACGGTGCAACAGA 1027916 29 100.0 37 ............................. ATGACATGTTGGAATATCTTGCTGAATATGGTACTTA 1027850 29 100.0 36 ............................. TCGTAACTGAATTCAGATGTGGTTCCACCTTCCTGG 1027785 29 100.0 36 ............................. ATTGGTTCAGCAGCAGGAGCGGCAATAGGTGTTGTA 1027720 29 100.0 37 ............................. AAGAAATACATACAATATGCAGAGGATGTATTAAGCG 1027654 29 100.0 35 ............................. CCGATTGTCGGTTTTTCGTCATCATCTTCATCTGC 1027590 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 44 29 100.0 36 GTTTTAATCGTACCTTATGGAATTGAAAC # Left flank : TAAAAATAGGAAACAATATATGTATGTAATTCTAGTATATGATTTTGGAGAGAAACGGGTAAATAAAATGCTCAAACTCTGTCGGAAATATCTGAACTGGATACAGAATTCTGTATTCGAAGGAGAAATTTCCGAAGCGAGACTAAAAGAATTGCTAATGCAAAGTGATAAATTTATGAAAAAAAATGAAGATAGTATCATTATCTTCAGCGGTCATACCCAAAAAGCCCTTGACAAACAGATTATCGGAAAAGAGCGAAGTAGGATTGATATTTTCCTTTAACTTTATTGTCGATGAAATATCTAAATATTCATCTATATTAGCATTTCTACATCAAAAGATCTTTGACTTATTGAAACACAATAACTTATTGAAGTTGTCGATTGCCGGTACTTCTTTTATCACTGGCAATCGACACTTTTAATTCAATTTTTTCCCTATCTTTGTAAACACATAAATAGTTAAAAATCAAATATATTATTATCCCTATTTTATAGGG # Right flank : TGTGGATATAAATGTAAGCATACTATTTTCCGCCTTGACGCACATTATTCACAACCCTACCTTTGCGCCGTAACCTTTAACAATAATGATTATGGCAAAAGAAAAAGTAAACTATCAGGAGGTATATGACCTCTACCAGTTTGTAGAATATCTTTTTCAGACACATACCCGAAGGTACATATCTTGTTTTGCTCTGTCCAGGATGCCGATTTCTTTACCTTATTACTATAAAGTATTGACGGTTCTTTCATTCAATCACAACCCCAAGGGGTCATGACCTTCTTGTACTACATCTTGTTTGTTTATCTAAAGTCTTTCAAAGATCCTGCTTCCTTTTCGAAAGCGGTTGCAAAATTACGGACTTTTTTTGAGACTTGCAAATATTTGCAAAAACTTTTTTCATAAATTTTATTCAAAATAATCATAACATACTTTATTTCAGAGAAATAGAAAAGTCGCTTCTCTCATTACGTTCAAAATGTGAATTCCATCATACACCT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCGTACCTTATGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [61.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA //