Array 1 2279-113 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACEGU010000064.1 Mycobacterium canettii strain CIPT 140010059 NODE_3_length_186286_cov_106.613840, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================= ================== 2278 36 100.0 37 .................................... TTGGAGGTGTCGTTGCATTCGTCGACTGCGTGGTATT 2205 36 100.0 35 .................................... ATGCCCGCTGGTAGCGGCCCCGGCGGCGCCGAGAA 2134 36 100.0 38 .................................... TTGGTGATCTTCCATGACTTGACGCCGTTGACCGCGAT 2060 36 100.0 39 .................................... GCGGTGCTCGATGCGGCCACTAGGCCGCGGCCAACTCGG 1985 36 100.0 39 .................................... TCGGTGCTGACCCCATGGATGCGAAGCGTAGACCTCTGT 1910 36 100.0 36 .................................... CAACAAGGTCTACGCGTCGAGGTCCACGGCTCAGAA 1838 36 100.0 38 .................................... CCGCGTCATCGGGCACGACCACGAACAGGTCCGTGAAG 1764 36 100.0 39 .................................... ATACCGGAAGCACATTCGCGCCAGTGGTCGTCGCAGAAG 1689 36 100.0 35 .................................... ATTCCGACTAGCGCGTCGTCGTTTCCAGCCTCAAT 1618 36 100.0 36 .................................... CGACAAGTTTGCGCGGATCAAGTCCGCGCCGGTCAA 1546 36 100.0 33 .................................... ATGTGGCGATTACGCCTGATCAGGCGAAGGCGA 1477 36 100.0 36 .................................... TTCAGTAAATTGCAGCGACGGGCGAATCCAGCAACC 1405 36 100.0 41 .................................... CTTCAACGACGCTGTATTGGGCCATGTGGGCTGGTCTTTCA 1328 36 100.0 38 .................................... AGCAGCATGGACGGTTTCGCCTGTATCCGGGTAAAAAA 1254 36 100.0 39 .................................... TCGATGGCGGCGCGGTTGCGGATGTGGTGGTCGCGTAGC 1179 36 100.0 38 .................................... TTGGCGTACATAGCGAGCTGTGCGGCAGTAGAGTGCGG 1105 36 100.0 31 .................................... CTTCGATTGTGCCGCCGCGGGTTTCGTTCAC 1038 36 100.0 36 .................................... TCCCCGGGCTGAGGCGTGTGTTCGTAGTCGCCTAAT 966 36 100.0 39 .................................... CCTTGCCAAGGGAGGTGCTGGTGTGCTTATGCCTAACAG 891 36 100.0 37 .................................... TAGTTGACGCCAAATGTTTGGACTGTGATCAATTCAA 818 36 100.0 40 .................................... GCTTGACAATGCGGTTGTCGCGCGCCTTTTTCCAGCCGAG 742 36 100.0 37 .................................... GTGTGTTTCAACGGGTTTCAGTTTTCTTGTCCCAGTG 669 36 100.0 39 .................................... ACTGGTTGTTGCCCGGCGACGGCGGCGCGTTGGCGTGTC 594 36 100.0 39 .................................... CATCCAGAGGTCGAAGTGGTGTTCGGTGTTCTCCTGTAC 519 36 100.0 35 .................................... TTCTGCGCGGCGATCCGGTCATGACGAGCCCGCAG 448 36 100.0 45 .................................... ATCACGACACGGCCTGATCGGTGTCGGTGGCGGCAAGTCGTCAGA 367 36 100.0 35 .................................... CAGAAGGGTAGCGTCGGCCGGATTGTCTGGCCCAC 296 36 100.0 40 .................................... CATCGAACAAGCGCGCGTCGGCTAAGCACGCGTCTGTCAA 220 36 100.0 36 .................................... TCTCCGTGATAGGTGAGGACCACCGAATCACCATCA 148 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================= ================== 30 36 100.0 37 GTCGTCAGACCCAAAACCCCGAGAGGGGACGGAAAC # Left flank : TTCAGTACGCCCTCGACTTGCAACTGCAAAGCCTCGTGCGTGTTATCGAAGCCGGGCACCCGTCGCGGCTCGTCGATATCGATATCACCTCCGAGCCATCCGGAGCCTAAATGCCCACTCGCAGCCGTGAGGAGTACTTCAATCTCCCGCTCAAAGTGGACGAATCCAGCGGCACTATAGGCAAGATGTTCGTCCTCGTAATATACGACATCAGCGACAACCGGCGGCGGGCTTCACTTGCGAAGATCCTGGCCGGGTTTGGCTATCGCGTCCAAGAGTCCGCATTCGAAGCGATGCTGACGAAGGGCCAGCTCGCGAAACTAGTTGCACGTATCGACCGCTTCGCCATCGACTGCGACAACATCCGGATCTATAAGATAAGAGGTGTTGCGGCAGTTACGTTCTACGGAAGGGGACGGCTTGTCAGCGCAGAGGAGTTTGTGTTCTTATGACATCATCAGCAGGCATTGTTACCACACGCTGGACGAATTGTCCATCGA # Right flank : CTCTGGTAGTGGGCTTCTGCCGGTGCGCGGGTTTGTGTCTGTCGTCAGACCCAAAACCGGCTCTTCGCAGTTGAGGGTGTAGGGCGGGTCGGCGCGTCGTTGCCGGGGTAGGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCAGACCCAAAACCCCGAGAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.01 Confidence: HIGH] # Array family : NA //