Array 1 10420-684 **** Predicted by CRISPRDetect 2.4 *** >NZ_SDEB01000038.1 Paracoccus ravus strain YJ057 YJ057_38, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 10419 32 100.0 34 ................................ ATCGAAAGCGGGATCGAGTTCGACGGCCGCGGCC 10353 32 100.0 35 ................................ CCCTCTTGTCAGAAACCCCGGCGCCGCGGCCGGGC 10286 32 100.0 34 ................................ GCGACCGTTTCGGAGGACTGATCATGGCGAACCG 10220 32 100.0 34 ................................ GCATGATCGACGCCGCGGCCGCGGCTTGGGCGGG 10154 32 100.0 34 ................................ CCTTGTAGGTCGGCGCCCCGGCCGCGGCGAAAGT 10088 32 100.0 36 ................................ TGGAAGCCGATCCTGACAGCTTCGACTGGACGGCAG 10020 32 100.0 33 ................................ ACGGCGCTGGTGTCGGGCTTGTCAGTCATGGTG 9955 32 100.0 35 ................................ ATCTTGACGACCGCCTCAATTGAGAACGCTGGCCC 9888 32 100.0 35 ................................ CTGCCCGGATGGACCACCCCGCCCTTGCTGCAACG 9821 32 100.0 34 ................................ CCGCTTGGCGCGCAGTTCCTCGTAAATCTGCGTT 9755 32 100.0 34 ................................ ATATCAGCGAGCCAGCGGGCGAAAGCTTCTGGGG 9689 32 100.0 33 ................................ GACATCGGCCGCGCCGCGCACCGCGCCGTGCTG 9624 32 100.0 35 ................................ AGCATGTAGCCTGCCGCACAGGGCGCAGGTGAACA 9557 32 100.0 35 ................................ AACTGGTAGGGGATACCATGACGCAAGAAACGCAA 9490 32 100.0 34 ................................ ACTGGCTTCGCTATTCTGGGCATGGCGTCTGGCG 9424 32 100.0 35 ................................ CAACGCGGCGGCTGCATCCGACATGTGGTCGGGGG 9357 32 100.0 33 ................................ AGATGATAAACGGCAGGATACAGCCCGAAACAC 9292 32 100.0 34 ................................ TCGCAGGCATGGGTCATAATGCGGCCTGAATCGC 9226 32 100.0 34 ................................ CATTGTCGCCGGGAAAAGCCACTCGAAAACCGCG 9160 32 100.0 36 ................................ CGGCCTCAATCTCGGAAATCGGCGATTGAACCTCGC 9092 32 100.0 35 ................................ GTGTCGTCTCCACTATAGGGTTTCAATCCGTCCAG 9025 32 100.0 35 ................................ ACTTCCATGACGACCTTGCCAACCCGTTTGCCAGC 8958 32 100.0 35 ................................ TCAACGCCTTTGCCCCAAGCGCTGGTCAGGACCAA 8891 32 100.0 33 ................................ GCGCATCGCCACTTCCGAGACATGGAAGGACAA 8826 32 100.0 35 ................................ TCCGTTTGAGCGGGGCGCGTTGCCCCTTGGCTATG 8759 32 100.0 34 ................................ CAGTTCGTTCCACGGGTCAATCAGGATCAGCTTG 8693 32 100.0 34 ................................ ATCACCCTGAACGATGTGACGCAGGTCGCCTTTA 8627 32 100.0 34 ................................ ATCGAAAGCGGGATCGAGTTCGACGGCCGCGGGC 8561 32 100.0 34 ................................ GCGAAAGCCTTGATGAAAGGCGGCGCGGTTGGTT 8495 32 100.0 33 ................................ CTCGACAGCGACCCCGAGGTCGTTCCGCTGGTT 8430 32 100.0 34 ................................ CACTCAACGCAATCGAATTCGGCGCATGGGTGAC 8364 32 100.0 34 ................................ CGGCGACATGGCGCGGCCTTCCGGCTTGGCGCGG 8298 32 100.0 34 ................................ CCGTCGCGGACGTGGAACCATTTGTACCGCCATC 8232 32 100.0 35 ................................ GCCTTATCGACCATTTGGCCGATCCGGCGAGCCAA 8165 32 100.0 35 ................................ ATTCCCGGCGCCGAGGCGCTTGCCGATCCCGTCGC 8098 32 100.0 33 ................................ AACATGACGCAAGGCGCCGCCCGCGAGTTCTCG 8033 32 100.0 36 ................................ CCCCGAACGCGGGTCGAGGGCGACGCATGGCCGGCC 7965 32 100.0 34 ................................ CCCCGGCCAAAGCGCCGCCCCGCCGGCCGGGCGC 7899 32 100.0 34 ................................ ACTATACCGTTCGCGACGTTCGGCCGGACGGCTC 7833 32 100.0 33 ................................ GAACCCTTCGACGTCAGAAAACTTTCCGGACGG 7768 32 100.0 34 ................................ CCCTTGATCGGTGAAACGTCCCGGCGATCACGCC 7702 32 100.0 33 ................................ GGTTACTCTGAGCGTCACGCTATGGACGGTGCG 7637 32 100.0 35 ................................ ACGAATGTCCAGCCGCGCGCGGTCGGTCCGTCCGA 7570 32 100.0 37 ................................ ATCCCGTTGATGGTCCCTGACTTGTATTTTCGGCCTG 7501 32 100.0 34 ................................ AAAGATCACGGAGTTGCATGATGGAACGCACATG 7435 32 100.0 33 ................................ TTTGCAGGCACTCGGCAAGCGATCATCGCGCAG 7370 32 100.0 34 ................................ ATCCTTTGCCTGCCGTGCGAAGTCGCCCCGGCAG 7304 32 100.0 34 ................................ GCCCCACTCATTGACCCATTCGATCCGGTCGAAA 7238 32 100.0 34 ................................ TAGGCCATGCGTCCGGCGAGGTCGATCTAAGCCG 7172 32 100.0 35 ................................ CCGCTTGAGCCGGGGATGCCCGCGACCCACACCGC 7105 32 100.0 34 ................................ AGCAGCCGCGATGGATAAGTTTGCCGCCCAGCAG 7039 32 100.0 34 ................................ CCCAATGGCTCTGCATATACCAGTGCCGGGGCTC 6973 32 100.0 34 ................................ ACGAAATTGATTGTGACGCTCGGCGTCCCGTCCT 6907 32 100.0 34 ................................ CTCGCGGTGTCACCAGATAAAAATGCTGTTGACG 6841 32 100.0 33 ................................ GTAAGCCTCGACCGCGGCCCCATCCCAAAGCCC 6776 32 100.0 35 ................................ TCGACGTCCTCGGACGTCACCCGGCCGGACGCCGA 6709 32 100.0 34 ................................ GTTCGCCGCTCGATAAAGCCCCGCGTCCCTTGCG 6643 32 100.0 34 ................................ CTCGAAACCCGAGGCAAGGGCGGCGACATTCGTT 6577 32 100.0 35 ................................ GGCTGCAGAGGTACGAACAGGCCCGGCGAACTGCC 6510 32 100.0 34 ................................ TCGCCATGCAGTGATCCATTCCTTGCGCGCCCGC 6444 32 100.0 35 ................................ GAGCCCGCGCCCGCCCTCGCGCATGGAGATCTCGG 6377 32 100.0 34 ................................ GCAGACCGGGTGTGGATTCCCGGCCCGAGCGCAA 6311 32 100.0 35 ................................ GCAATGAATAGTCACTGGATCGCGTCCTGCGCCGT 6244 32 100.0 34 ................................ TTTAGCGGCGATGTGGTCATGAAGCCTTCCGCGA 6178 32 100.0 34 ................................ AAAATCCCCATGCTCGACGGGACTTTCGAGCAGG 6112 32 100.0 35 ................................ TCTTTGAGCCCGAAAGCCTGTCTGGGCATCCTGCG 6045 32 100.0 34 ................................ TCGGCAAAAGAGCCGCTGCTGCTCGGTCAGACCC 5979 32 100.0 34 ................................ CCCGACAGCACGCCGAGCCGGCCGGCCGGCAAGG 5913 32 100.0 33 ................................ CTCCCCGTCGAGATAGCGGCCCGTCATCAGGAC 5848 32 100.0 34 ................................ ATCGTGACCGGCGAATCTGCCGCGGCCTCGCCCG 5782 32 100.0 33 ................................ GCGCCCGTCCGACGCTTGCCGCAAGATCGCCTC 5717 32 100.0 34 ................................ GTCGCAAATGCTCGCCGGCGATGTCTGGTTTGGC 5651 32 100.0 33 ................................ AATCCACGCGCATGTTAAAGATTCCGGCCTCGT 5586 32 100.0 34 ................................ TTGTCGATCTTGGCCATAACGCGCGCATTGCGTG 5520 32 100.0 34 ................................ GAATCCACGCGCATGTTAAAGATTCCAGCCTCGT 5454 32 100.0 34 ................................ TGCACGGACGGCTCGCATCCGACGCTGCGCAGCA 5388 32 100.0 34 ................................ AGACATATTGCGGCGGGACTTGGGAAGGTGAAAG 5322 32 100.0 34 ................................ CCGCGTCCAGCGCCACATGTCGGAGAGCCGGATG 5256 32 100.0 34 ................................ CCCGAAATTCTCGATCCTCTCGCCCTGATGCGGA 5190 32 100.0 33 ................................ CCCCGTGCGCTCGCAAACTCTTGTCAGGGATGT 5125 32 100.0 34 ................................ CCCGAAGATCCGCGAGGCCGCGCGCAAGCGCGCC 5059 32 100.0 35 ................................ ATATCACTTGCCTCCGGGAGATAAGCCCCGCGCGA 4992 32 100.0 35 ................................ CTCGCGCTCGGTCAAGCCGATCCGCGCCTCGCGGG 4925 32 100.0 34 ................................ GCGCGTCCTTGGCCGGGCGGCGCGGACGTGCTGC 4859 32 100.0 34 ................................ CGTCCTCGGAAGCGTCGAAACCCTCGGCCGTGAG 4793 32 100.0 34 ................................ ATCAAGGCTTTCGCGAACGCCGGAAACTCGCCGT 4727 32 100.0 34 ................................ CTCGCCCGACAGATCGAGGCGCCGGGCGATCATG 4661 32 100.0 35 ................................ CTGAGGCGGCATCGCTCCGATATTCAGACATGCAA 4594 32 100.0 33 ................................ CGAATGCGCGACCTCGAAATCGGCCCGATAGTC 4529 32 100.0 34 ................................ CTTGCCGCAACCGGGCGAGGCGGGCGCAGGAAAC 4463 32 100.0 34 ................................ GCGATGAACGCGAATATCTTGCCCGCAGGCTGTC 4397 32 100.0 34 ................................ CAGACGAATCTTTAAAGCAACCTATCCTTTTGGA 4331 32 100.0 32 ................................ CCCCCATCATCATCGGCTCATCAGGAGAGATT 4267 32 100.0 35 ................................ GCGCCCGTCCGACGCTTGCCGCAAGATCGCCTCGG 4200 32 100.0 37 ................................ ATCGCAATCAACTTCACGACCGGCGAGATGAAAGGCG 4131 32 100.0 33 ................................ CTCGACGGGATCAACGCGCAATGGCTCGAGGTC 4066 32 100.0 34 ................................ GCGGCCGTTGATCGCCTGACCGGCAAATCGGATT 4000 32 100.0 33 ................................ CGGTTAACCGCGTCGAACGCTTGCCCCGTCTTG 3935 32 100.0 34 ................................ GCGCTTGCATCGCGAGCGCGATCCCGTTGCGGCC 3869 32 100.0 33 ................................ GGCTATGCTCCGCTTAATCACGTCTGGAAGCGA 3804 32 100.0 34 ................................ CTCATCGCCTTTCGGCTCTGCCGCCGCCGCCGCG 3738 32 100.0 34 ................................ CCCTACGGGGAAACATACGCGCGCTAACCCCCAA 3672 32 100.0 39 ................................ CGGTTAAGGTCCAGCGCGTCGGACGGTCGAAAACCTTGC 3601 32 100.0 33 ................................ CGGTTAGCCTCGCGGACGTTTACGCGGATTTTC 3536 32 100.0 33 ................................ CCGCTCAGCCCGCAATCGCGTTTCAGGAGGCTG 3471 32 100.0 33 ................................ CGCGCTGAGTGGAGGCTGTGATGGGCGATCCGA 3406 32 100.0 36 ................................ CTGCCGCTCGTTCGCGCGTGGCTGGACCGAGACGAC 3338 32 100.0 34 ................................ TGGAATGGCGCTCGGCGCAAAAGGGCAAGGGGTG 3272 32 100.0 34 ................................ CCCGTCGCGGACGTGGACCCATTTGTCCCGCCAT 3206 32 100.0 35 ................................ CCCGCGGCCGGCGCGGTTGTGAAGGTCACAACGCC 3139 32 100.0 34 ................................ TTGGGGCAGGATGACGTCGCGGTTACGCTGGCGC 3073 32 100.0 34 ................................ GTGCTGGCAATCTTGAACCGCAATTTCGCGAACG 3007 32 100.0 34 ................................ CGCATCATGCCGGATGCAGGCGGATCGGACGGGA 2941 32 100.0 33 ................................ GCCAGTTATGCGGCCCATACTTAACCGCGCCCT 2876 32 100.0 33 ................................ GCGGCCGGGCAGGTTGCAGGTTTGGACAGGCGA 2811 32 100.0 34 ................................ CTCGAATTGCAACCCGGCGGCCGCCGCGACCGGC 2745 32 100.0 33 ................................ ACCGCGCGAGCAACGCGACCTGATCGACGTTGA 2680 32 100.0 35 ................................ CCAAAAGGCGGCATCGGCGGGCGACTGGCCCCCGG 2613 32 100.0 34 ................................ CGCGGCGAACTGGCGCCCCTCGGCCGCCCATTGC 2547 32 100.0 35 ................................ TTCGGATCGCCCTCGGATCTGTCCACCGTCACGGC 2480 32 100.0 35 ................................ TTCGCCCAAAGCAATAGCCTTGCGCAAACTTTCCG 2413 32 100.0 34 ................................ CGCCGACCGCGAGGATCAGGTCGCCGGTTGCCGC 2347 32 100.0 33 ................................ GCGAATGACCCCCGATGACATCAAGCAGGCCCG 2282 32 100.0 35 ................................ ACGACATCAAGGCGACCGATCCAGACTTTGCCGCG 2215 32 100.0 35 ................................ ACGACATCAAGGCGACCGATCCAGACTTTGCCGCG 2148 32 100.0 34 ................................ CCAAAAGGCGGCATCGGCGGGCGACTGGCCCCCG 2082 32 100.0 35 ................................ CATCACCGACACCACGGCACAAAGTCACGAGAACC 2015 32 100.0 34 ................................ GCTTCAGCGTCAGAAAGCGGAACAGAGGGTTCAA 1949 32 100.0 34 ................................ AACTGTCGCGGTAGTCCCTACCTTGCGATGAATG 1883 32 100.0 34 ................................ TTAGCAAGCTCAATGTTTGCCAGACTCAGGCGAA 1817 32 100.0 35 ................................ ATCTACTTAGAAAAAGAACGGTTCGGAGGTCGGAA 1750 32 100.0 34 ................................ CCCACGTTCCGTCCGAATAGAACGTCACTCGCTT 1684 32 100.0 35 ................................ CTTGAGCGATATTGCGCGCTTTGGCGCGAGCGATA 1617 32 100.0 33 ................................ TTGACGGTCGCCGTTGACGTGCAACCGGGGCGC 1552 32 100.0 35 ................................ ATGTCATTGCCTCATGCGAAGACATTGCGGATGAG 1485 32 100.0 35 ................................ ACACAGGCACCCCCGGCACGATGACAACCGCGCCC 1418 32 100.0 33 ................................ CCGCTCGGACCGCAGGAATGGATGAACCGCGAG 1353 32 100.0 34 ................................ TCCCGCTTCCCGCCGTGTCAGGTCAGCCTGTACA 1287 32 100.0 34 ................................ GAATGGCCTAGATATTGGCTGATCTTCGGCATCG 1221 32 100.0 34 ................................ CGTGCTGGCAGCGGTCGCCGCAGCCCGCAGCGCC 1155 32 100.0 33 ................................ CGAAATGCCCGAGCCGGGGAGGCCCCGCCATGC 1090 32 100.0 34 ................................ CCCGCCAGCCCGCTCAGGTAGTCGTCGCCACCCT 1024 32 100.0 34 ................................ ACAGCGCCAACGCGGTCCAGATCCATCGCGAGAG 958 32 100.0 34 ................................ TACACGCTTCCGAGCGAGCCGGATCTGGAGATGC 892 32 96.9 33 ....T........................... GCCACCGAGCCGGTCCCGGCCACGCCCGACAAG 827 32 100.0 34 ................................ ACGGCGTATGAGCAAGCCGCGCTGGCCCCGATGG 761 32 100.0 14 ................................ GTCGATTTTTCGGA Deletion [716] 715 32 84.4 0 T.............A.......A......TG. | ========== ====== ====== ====== ================================ ======================================= ================== 148 32 99.9 34 GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC # Left flank : CACCATGGTTCTGGAGTTGAGATGCTTGTTTTGGTCACCTATGATGTGAACACGCTCGACCCCGGCGGCAAGAAGCGTTTGCGCCAGGTGGCGCGCGCGTGCGAGGATTTCGGGCAGCGGGTACAGTTCTCGGTTTTCGAGATTGAGTTGGACTCTGCGCAGTGGACCCGCCTGAAGGCGCGTCTAGAGGGGCTCATACGTCCGGAAGTAGACAGCCTTCGTTATTACTACCTCGGTTCAAACTGGTCGCGCCGGATTGAGCACGTAGGTGCAAAACCCGCGACGGATCTTAACGGCCCTCTGATTCTATAATTATCATGACCCTGCGAACATGAAGTGTGCCAGATTTTGCACCGAGGTTCGCATCCGTCCTGCTCTTTTGAAATCGTTAAATATTCTTTTCCTGTCTGCCTCATTGGCTGACCTGGGGTGAGAGCATCTGACCCTTTCGCGTTTGTAGGAAAGATTGCGGTTTAACAACAATGCGGTATCTGTGGGCT # Right flank : AGGCCAAGGAGTTGGGCGCAATCAAGAGTGAGATTGTCGCCTCCGTGGATCGTGACCAGGGGTCGCGCTCAATTGCCCCTTCAGGCAAAGGATAACCACAGATTCGACCCATGAATCAGACATCGCTGCTTTCAAGTTGGTGTCGCGACGCTTGGTCAAAATGTCGTTGAAGTCTTTTACCCCCCGTTCGCTTGCGTCTGTGAGCGATTCGTATGCACCCCTATTCGAGACGGTTTTGCTCATGTTGACATTTGGTCCGACGGCGTCAAATTTCGACGGCTGTTCGGTTCAGGCCAAATCCTGCTCCCGCAACCAAAAACTACAAAGATATCAAATTTATAAGCCGATGGTATTCAAATACCACCGGCCTCTGCGCGCTTACATCAACGCCAAAACTGAAAAACCGCAGCCGTAGGTAAAATCCGTGGACGGCCTTCGTGGAAGCCTTGTCACATCAGGTTTCCAGTCATCGCCTGTATCAGGCACTGTCCACTTAACCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-7.20,-7.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //