Array 1 226548-225911 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKKL01000004.1 Actinomyces oris strain UMB0183 ERR1203676.17957_1_88.4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ===================================== ================== 226547 24 95.8 37 .................A...... CACGGGCTCGGGCTTGCCGGTGGCGTTGAGGACGTCA 226486 24 100.0 37 ........................ GGCATCGACAGCCCGGACGACCCGATCCGCGTAGTCA 226425 24 100.0 37 ........................ CGCGCCCAGCCAGCAGTCAGCTCCTTCGCCCAGGTCA 226364 24 100.0 37 ........................ TGCGTCGGGCCTCTCAGCCGCCCAGATGTAGGAGTCA 226303 24 87.5 37 .......AC...T........... CGGGTTGCGCAGCACCATCACGAACAGCAGCACGTCG 226242 24 95.8 37 ........C............... CAACTCCACTCGCGGGACACTGGGCTGGCGCACGTCA 226181 24 100.0 37 ........................ CGCTCCGGGGAGCCTGGACCCGACGTCGGTTCAGTCG 226120 24 91.7 37 ........C.C............. CGTCCGCAGATTGCCGAGCTCTTCGAGGCGCTCGTCA 226059 24 100.0 37 ........................ CCAGCGTGAAGTCGGGGCCCTGGAAGACCGCAAGTCA 225998 24 91.7 37 ....T...C............... CTCGGCGAGTGAGGCGATGAGGTGGACCATGAGGTCA 225937 24 91.7 0 ........C...........C... | C,CT [225913,225917] ========== ====== ====== ====== ======================== ===================================== ================== 11 24 95.8 37 GCCCCGCGTATGCGGGGGTAGAGG # Left flank : CTGGATGCTGCCACTCATCGGTGGGTTGGGTCGCCGTCACCTGCCCGTCCTGCGGGGGGTGCTCGTGGCCGGGGGTTCTCGGCTTGCCTCCGTGGGACTTGCGGTGAGAACGGGGGTGGTGGAGGCCAGACTCGCCGAGACCAGGACATTGGCTTCCCTGCCTCGAGTTCTGCGGGCCGCTACGGCTCCTTCGTTACGGTGGACCACTGTTGTGCCGACGGCGGAAGAGCCTGAACGCATTGTGTCCTTGTTGGAGGAATGCGCCTCGGGGCTCGGCTGCAGACTTGTTGGGGCTGAGCGTCACTCCGACTCACGAAGCGACGGAGGTGTCGATGGGCAGGAGGATAACGGGCGCTGGCACGTTTCGGTCGCCTTCGACGCGGAGGTGCCCGGGCCGGTGGTCTTTGACGGCGCCCTCATGGTTCCCCTGGGGGCCACCACCTTGACAGTGAACCCACGGCGACCCCGAACCGACTAATACCGCAGGTCAGCAAGTGTCA # Right flank : ACCTGCGGCTGACGCTGTCTTGGAGTGGGACCTGGTGAGGGCGCCCGGCCGGCCTCCAAGACCACGCGGAGTCGAGCATGTCAGCAGCTTAGTGTCCACGGTGCTGACATTAGCGGTCCCGCCGTCGAAGTGCCCAGCGGGGATCGTTGGAATTCCGCGGTTCTTTCTCGGGTCGCGGCATCGGAGCGGCGTTAATGTCAGCGTCATGGACACCGATGCCCCGCCAGGTCGCTATCAGCGACTCTTTCCTCAGTAGGTCGGGGCCTCGAAGGTTCCGACCCGCCCCGTGATCCCGGCCCCCACCCGGGTCGGGGAGCCCGGCCCCGGGTGGGGGCCGGGAGCCCGCCGGGACTCCGCCGTCGGGCCCCGCCTACTTGGTGGGGGTGCGGCCCAGGGTGAGGTAGCCGGGCAGCGTCTGGTCCTGGCCGGCGCTGGAGAAGCGCAGCGGCTGGCCCGAGTCGAGCGGGTTGACCACGCGCACCAGGATCGTGTTCTGTCCG # Questionable array : NO Score: 2.99 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCCCGCGTATGCGGGGGTAGAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [4-4] Score: 0/0.41 # AT richness analysis in flanks prediction: R [31.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //