Array 1 19302-18210 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NVZM01000056.1 Neisseria meningitidis strain MRSN430928 MRSN430928_contig00056, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     19301	    36	  97.2	    30	........G...........................	GTTTCTTCCCATATACTGCTGTTCAAACCG	
     19235	    36	 100.0	    30	....................................	CTTCCGTGAGATACATTTCCCAATCTTCTT	
     19169	    36	 100.0	    30	....................................	TGATTTGCTCGACAGGTGAATAGCCATAAA	
     19103	    36	 100.0	    30	....................................	AATTTAATACGGCGACCATCTCGTGCCAAG	
     19037	    36	 100.0	    30	....................................	TCATCAATCGCCCACTCAAACCCAAGCATA	
     18971	    36	 100.0	    30	....................................	CCGCAAAGCAGCCGAAAAAGCCGACAGGAA	
     18905	    36	 100.0	    30	....................................	TGACAAATAAAGCACGATTGTTGCAAAAGG	
     18839	    36	 100.0	    30	....................................	CCAACGGATAAAATTACGCCCAAGCACCTG	
     18773	    36	 100.0	    30	....................................	GTATTGAGCGTCAAGTACTCGCCATTCGAG	
     18707	    36	 100.0	    30	....................................	TGAAGGTTCGATAATTCGACCTGAAAAACG	
     18641	    36	 100.0	    30	....................................	TCACTCTAAAAATCCGATTCTACCACCGCT	
     18575	    36	 100.0	    30	....................................	TTGGCTCGTCTGCTGCCGTCAATCGTGCGC	
     18509	    36	 100.0	    30	....................................	TAGATTGCCTCATATACGCCGAGCGGGTAG	
     18443	    36	 100.0	    30	....................................	CAGGTCGTGCTGGAGCAGGCCGACGATTTT	
     18377	    36	 100.0	    30	....................................	CATACAGTTCATCTTCACCTGCAATCAGGG	
     18311	    36	 100.0	    30	....................................	TCTGCGGATTCGTACAAGTCATAAACTTTT	
     18245	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        17	    36	  99.8	    30	GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT	                              	       

# Left flank :   GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGTGCGGTTTGCTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG
# Right flank :  ACCCCAACGGGAAATCCTTATTCTATAAGGATTTCCCGTTTTATTTAGTCTGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACATAGTCTATTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGCTGGAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATCGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACACCGGCTTGAAATGACGAAACCATTTTGTCGATGGCAGCCAAGGTG

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         R [matched GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.90,-0.40] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.68,4.5   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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