Array 1 593-138 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAAKNK010000041.1 Aeromonas media isolate KLG6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 592 28 100.0 33 ............................ CGATTCGACCAGGGCGCGCAGGGTCTCCTCCCG 531 28 100.0 33 ............................ CAGAGATCCAGCGCCACAGCGGGCGGGTCAGCT 470 28 100.0 33 ............................ TCGCAAGCATGAAGATCCCGCTCAAGCTGCTCT 409 28 100.0 33 ............................ TGGATCACGGTTTCGGGGCGCGTGGCTTTCAGC 348 28 100.0 33 ............................ TCCAGCGCAGATAGGGCGCCAGGTCTTTGCAGC 287 28 100.0 33 ............................ CGGCGGGCAAAAGAAAGCCCGCTCAATGGCGGG 226 28 100.0 33 ............................ TGTGATCGGCTGACGCTTCGGAGCCTGCACGGC 165 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 8 28 100.0 33 GTCTTCCCCACGCCCGTGGGGGTGTTTC # Left flank : TAAAGAGTCACTCTGTATCGACCTGGCCTTCTCCCTGACTCGGGAGATGGCCGGGCGCTACGAAAAAACACTGGTATCGACGTGCTTTCGGGAGCGAGTTATCGAGCAGGATCTGCTGGCCCGTGTGGCTAATGACATTCCGGTACTGCTGGGGAAGATGGATGCTGATAGTGCTAGCCAATGATCTGCCTCCAGCCGTGCGGGGCAGAATGAAACTCTGGTTTATCGAACCCAAGCCCAATGTGTTTGTCTCCGGAGTCAAGGATTCGGTCGCGGATACTGTGGTCGAGTACCTCTACCAACACTGCTCGCAAGGGGCCGGAGTGGTGATGTTCAAGAGTGTCCCCAAGGCGCCGGGCTATCAGATCCGTACCATCGGCTCACCAGCCAGAGAGCTGCTGGAGTTGTCGGGTCTCCAATTGGTCGTAGAAAAGCTGATTGAGTAAGGGATAAACCACAATCTATGGTTTGTTTCGAGGGTTCTTTAACAATATATTGGT # Right flank : CTCAGCCATGCTGTCACCGCCGATGTAAAAATGACCCACTAACGCCGGAGTAAAGTTGACCCACCTAGGCCAAGATCGTGGCTTTTGAGCCACGCCCATGTTGACCCAGGAGTTATCAGTGGAAATCAGAGTGTTGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 156-4209 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAAKNK010000075.1 Aeromonas media isolate KLG6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 156 28 100.0 33 ............................ TAAGCGCCTGCATTGCCCGCCGCCAAACATGGG 217 28 100.0 33 ............................ CTACACTGAGGTCAACATCAAGACCGGGGCGCA 278 28 100.0 33 ............................ TGGCGGATCATTACGGTGTGACCATTGGCGAGT 339 28 100.0 33 ............................ CTTGTCAGATGAACACCCAAACGATAACAGTGC 400 28 100.0 33 ............................ CATTGAGGCGTCAGACAACAATTCCCCCTGTTC 461 28 100.0 33 ............................ CCTCGGAAAGCGTAGTCCCCCTCCCCTTGGCCC 522 28 100.0 33 ............................ CGTGGAAAAGTTACAAGCCCGCTTGGCCGAACA 583 28 100.0 33 ............................ TTCCGTCGAGCTTGCCATTACCTTCGCCAATTG 644 28 100.0 33 ............................ CATTGAGGCGTCAGACCACAGTTCCTCTTGCTC 705 28 100.0 33 ............................ TTAAAGCCCAAAGGCCAAAGATATTGGATTTTG 766 28 100.0 33 ............................ TGAAGCGAGCCGCTGACGCCCTTGGCATGAAGG 827 28 100.0 33 ............................ CTCCACGCAAGAGGGGTTGCACAAAGACCGATA 888 28 100.0 33 ............................ CGTAGCATCGACCGGATGGCCGGGGTGCACCCA 949 28 100.0 33 ............................ TCTGTCGTACTCACACTCTTCGGGGATTGTCAG 1010 28 100.0 33 ............................ TCTGGCAATCAATCCCGACCCTGTGTAACTGAA 1071 28 100.0 33 ............................ CGCAAAGCGGGTCCCCAAAGGGCCTCTACTCCG 1132 28 100.0 33 ............................ CGATAATCTCGGTGGTGTATTTGTCCTGCCCAT 1193 28 100.0 33 ............................ TCAGGTTGAACCCTTCCACGGAAACCTTGCAGC 1254 28 100.0 33 ............................ TCACACACCCATGATAGCTAGGCGCTGCTCTGC 1315 28 100.0 33 ............................ CACGCGCTTTGGGTCGTAGTCGAACTGGTAGTA 1376 28 100.0 33 ............................ CAGGGCGCGGCCCGCATTGATCAGTGCCGTGCA 1437 28 100.0 33 ............................ TGGGTCACTTTCACAGGCCAGGCGTTATGCATC 1498 28 100.0 33 ............................ TGTGACCATGACGGCCGAAATCCTTAAGTGCCA 1559 28 100.0 33 ............................ CACTCTATACCTAGCCAGCGATCAAAAGTCGGT 1620 28 100.0 33 ............................ CGGAATCATCGACAGTTACGCGGGTTACAAGTG 1681 28 100.0 33 ............................ CACGGCGGGCCTCATCTAACAGGTCCCCTTCAT 1742 28 100.0 33 ............................ TCGCCAGCAAGGCGGCACGGGTAGCTGTCACAC 1803 28 100.0 33 ............................ CTTAAAAGCAGTGTTGAGTTGTTCATTGATAGT 1864 28 100.0 33 ............................ CCGGATCTTGACGCGGGTCGGCTTCCTCCAGCC 1925 28 100.0 33 ............................ CGTGATTGTTTCCGCTTCCCGCGCTTTACCCCG 1986 28 100.0 33 ............................ TACCTGCCGCTTCTCCTGCTCGTTGAGCGTCAC 2047 28 100.0 33 ............................ CCTGGGTAAGCCCGAGAGGAAAGCAGATATACG 2108 28 100.0 33 ............................ TTCCGGCGGCAACGGTTCGGCCTGTTCCTTGGC 2169 28 100.0 33 ............................ TGGAGCAGCGCAGACGTATGACCTCGGAAAGGA 2230 28 100.0 33 ............................ CGCCGAATCCTTGGCTGAATCAGACCGTCAGCG 2291 28 100.0 33 ............................ CAGTGTTGAGGTGGTTGAGCCATTCCGCATGGA 2352 28 100.0 33 ............................ TCACTACCTACACCAGACACCATGATGTCGTGC 2413 28 100.0 33 ............................ TTGTATCGGGGCTAAATTCCGGGGGAAAGTCAG 2474 28 100.0 33 ............................ CAGGTTCCTGTCGTGCCGTTCCAAATAATCTCG 2535 28 100.0 33 ............................ TGAAGTTTCCAGCATCATCGTAATGGCTCTCTG 2596 28 100.0 33 ............................ CCCTTGAGCTTGAGGCCGAAGGTGTAATCGGCT 2657 28 100.0 33 ............................ TGGTTATCGTGTCCACCCCCGAAGGTTTCCGCG 2718 28 100.0 33 ............................ CGGTCTGGTAGTGGAAGCTCTGGCGCTGCGGGA 2779 28 100.0 33 ............................ CCTGTTGAGCAGAATGCCGGCGCTTTGAATGGG 2840 28 100.0 33 ............................ CGTCTGGTTGCCGAGTGCGGACGTGACGAGCGT 2901 28 100.0 33 ............................ CTGTTGGGCTTATGCCGTTGTTTGCTGCCTCCT 2962 28 100.0 33 ............................ CAGCAACGTTTTCCTGACCCAATTGGCCGAAAG 3023 28 100.0 33 ............................ TGTGCCGTGCAGACTTCGGGTGGATACACTCAA 3084 28 100.0 33 ............................ CGCGATCAACCATGGCGGGAAAATGGAGACCGT 3145 28 100.0 33 ............................ CATGGAAGGGTCTCGCGGTGAGCGGCACGAGTT 3206 28 100.0 33 ............................ CGCCGCGTCTGGCGGCACCATCATCCTGTCCAC 3267 28 100.0 33 ............................ CGTCAGCGAGGGGATTCGGCAAGCCCTTAAACA 3328 28 100.0 33 ............................ CAACTACGTAAGTTTATCTGGATGCAGCTGGTC 3389 28 100.0 33 ............................ TGAAAAAGCATATCGAGATGCGCTTGGCTGATG 3450 28 100.0 33 ............................ CAGGTCATGAAGAGTCGAGGGCGCATGAAGATT 3511 28 100.0 33 ............................ CTGTCTGCGCCGCCACAAGTGCCCTTGAACCAG 3572 28 100.0 33 ............................ CGACATTGCCGCCAGAGAGTGCCGTGAGTGCGG 3633 28 100.0 33 ............................ CTCGGATATACAGGCCGTTGGCCTTCTCGTCAG 3694 28 100.0 33 ............................ TCCGTGATTTCTCAATGCAGTAAGTATTGAGTT 3755 28 100.0 33 ............................ CTAAAATCACTGGTAGAGGGGTTTTAATCATGA 3816 28 100.0 32 ............................ GGTGCATCAAGCAGTGGGACGGCAAGAAGTGG 3876 28 100.0 34 ............................ CGGCACCACCGGCAGCACCCGCCAGAAAAAGTTG 3938 28 100.0 33 ............................ TGGCCCGTCCCCGAGCGCAACGGTCTGGTTCAG 3999 28 100.0 33 ............................ CATGACCAAGATTATCGGGTACAACCTGATTGC 4060 28 100.0 33 ............................ TTGGTCATACACTAGCGTTGCCACCATCACACC 4121 28 96.4 33 ..............A............. CGAAATCGGTCTCGATGAAACCGGCGATGGTTG 4182 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 67 28 99.9 33 GTCTTCCCCACGCCCGTGGGGGTGTTTC # Left flank : CTATCGTTTGAAAGAGAAACGCAAAGCAGGGGCCACACCCAAAACCAATTAACCCCATGTCCGGGTGGATCACTTTTCAATCGGCGAAATTAGCCAGAGTGGATCAGTTTTCGGTCGGCGTTGACACCATGCGAAAAACGGAAGGGCGGCCAGACG # Right flank : CTCAAGTTCTGTGATCGCCAATTATAAAGAAGATCAAGCAGTACCCAAATTCCGGCGGCTTTGGGGAGATTTTTCTCTCTCGTATTTGTTGATAGTGAGGGTTACATTGACTCCCTCCATTCACTTTCTGAGAAGTGCCTATAGAATCGGAACACCTTAGTTCACTGCTGAATGAATTGAACAAAGTCCCCCCCCACCAAAAGGGAGTCCAATCTCTTCTCAATTGGTGCTCGAGATCACTATGAGAATCCGGTCAGTGACCTGCTCGCTTTCTTTTTGAACCCGAATGCATATCACAACCTTGATAGCATGGTGTTGGTAGCTCTGCTCGAATGCCTGCCTGAGGAAGCGCAATTATCAGCATCGCTAGTCAATGGCCCCCAGCGGGAGGGCACCAGGGCGAGATCGTGAACATTTTGTTAAAAATTAAAAATAGTTTTTTGCCTACAAAACAAATACTTATAGGCCTGTGATATGCAGTTAACTTTATAGTCAGGATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //