Array 1 10492-10717 **** Predicted by CRISPRDetect 2.4 *** >NZ_NUKL01000011.1 Bacillus cereus strain AFS043896 AFS043896_106_G11_Contig11_140523, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 10492 29 100.0 37 ............................. GCTGTATTATCTTTAACTTCTTTCTTCTCTAAATCTG 10558 29 100.0 36 ............................. ACATACGGTGATAAAACTACATCGTATCAGGTATAG 10623 29 100.0 37 ............................. GAATACTCTCACTAGGAGGTGTTGTGACGTTATGACG 10689 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ===================================== ================== 4 29 100.0 37 TTTAAATACATCTTATGTTTCTGTTCAAC # Left flank : ATATAGGGAAATACCTATCAACGTTTTGAAAAAAAAGACAAAAAAAGCGACGAAAAACGAAAAGAACCACCCAACGCCGCAAACGTACTTGGTGGTTCAATAAAAAATAACTAAATTTTTAGTAACCAACCACCTTGCGGTAGCTGTTACATAAGGCGAAGTGTTACCAGCACTTCGTCTTCTTTAGTTTATGCAAAAACTATTGTTATAATACTTCTACACATATTATAACATCAACTATAGTACATGTCATGCAGATTTGTTCACTATAGTTGGTAAAAGAGACCAAATTATTATCAAAACGAAATCAATTTTGTTCCTGTCTCAAAATACTTTGCAGGAGCATAGATTTTCCTACTCTTAATTCCCCTTTCTATGAAAAAACTTCTCTCTTTAAAAATTTTCCTTTAGCTTATCTATTGAGTTACTCGAAATCAATTCTAATTTAAGAATTTTGTTCAACAAGTTACGTACTTACGGTAAAATCAATAGACCAAAAT # Right flank : CACCGATTAAATCAACTTTTTATTACCTTCATATTTTATATAATACTATACTGCATATGAGTTTAGTGATTTTTTTACCAGCAGTTCATAAAAAAAATAAAATTCTCAAAAAGAAATAGTATAAGTCTTGAATTAACAAAGTTTATTAGATTCCCACTATCATTTCACTTGGTAAATTCACAAAAATAGGAGATCGCTATTATTTCTATACCCTATTTCAATCTCATCAAAGCTATATTCATTTAGCATTTTGATAATAGTAACTAAGTCTTCCCCCTCATTTATAATATTCCTAATTTCCTTTTCCATTTTTAATAAATTTGAGGGAGTAATCCCCCCCCCTAAAAGTAGATTTTTGATAATGATTTAAATATTTTTTACAGATTTTAAAAACTTTCGTCACTCGTTTCTCATTTACATCATAAAAAACAAACGCATAATTAGCATTCATTTGATTTTTCATTATTTTTTCTCCTTTAGATTAAATGGAATAAAAGAAT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTAAATACATCTTATGTTTCTGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 20586-19895 **** Predicted by CRISPRDetect 2.4 *** >NZ_NUKL01000011.1 Bacillus cereus strain AFS043896 AFS043896_106_G11_Contig11_140523, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 20585 30 100.0 36 .............................. ATTGCCTTAACTGTAAAGCTATATTCTTCAGCTTCT 20519 30 100.0 35 .............................. GGTAAATCGGGCAAATTGTCCATTGGGTCTTTTAT 20454 30 96.7 35 .....................C........ CTTGCTACACTTTCCAATAACCATGTCGGAATCCA 20389 30 96.7 37 .........A.................... TTTCAATTAGTCGTTTGTGATAAATGATTGCAAGTGC 20322 30 100.0 36 .............................. ATAAGTACAACGTCAAACTCTGTATATTCCCTTCTA 20256 30 100.0 37 .............................. CAAATGGTGGCTACCCGTGAAGGGTTTGAAATATGGT 20189 30 96.7 37 .........A.................... TGCTCTAAGACTACTGCATTCCCATACCCTCCAAATC 20122 30 93.3 36 ...A.....A.................... ATTTTATCTTCTAATGGTTTTCGTGGTCTTGGCATT 20056 30 93.3 36 .........A......A............. AAAGAAAAGGCAATGTGTGGTGCAACGAGTGTAAAA 19990 30 90.0 36 ......T..A......A............. TACAAATCTTATCATAACGTATGATTTAAAGAATTT 19924 30 76.7 0 A.....T.GA......A......A.....A | ========== ====== ====== ====== ============================== ===================================== ================== 11 30 94.9 36 GTTGAACAATAACATATGATGTATTTAAAC # Left flank : AAAAGTATATAATCCTTCTTAAACTAGTAGCTGAATGGATAATCCAAAGGTACATCCCTTAATGGGGATGTGCCTTTTTTCGTAGAAAGGGGAATTATTAATGGATAAAAAGAAAAAACAACGTGTTAGACGTGTAATTATTATAGGGATTGTCGCAATGATTTTATTGATATACAGTGGGAACGAATTTCAGGAGAAGAATGGAAGAATCTATGCTCCTGCAAAGTATTTCGAGACGGGAACAAAATTAGTTTCATTTTAATCTTTTTCATATTTTCATCGAACAATATGGGGTAATACGGAAGTTGCCGAACGTTTTACCAGATTATTTACCAACCTAATTAATTGGTGATAACATGTAAATGTAGATAAAGTAAGGAAATTCTGCATAAATTATAAGTGAATGAGATTTATATCAATTAGCTGGTAAAAAACTTATAAACCCACGTTTCTATAGTATAATAGTGGATACAGGAAATAAAGAGCCAGTATTATTCGGT # Right flank : GCTAAAAAATGTTATTGGTTTAGGAAGTAATATGGTTAAATAATAAAGTAGAAAGTATTATAATTTCGAAATAAAAAGCACACTCTTGATTTGAACTGCCCCCTATAAAATAGGCAGTTTAATAAGAGTTGTGCTTTTTTATTTAAAACGGAAATATAAGGTGGGGAGGATAGAGTGCTGAATGAGCTCAGTATAATTTAATTGTTTACATTTTTGTAAAATAAATAAATCGTATTATTTATTATAATATGATATCCTATTTTTAGGAGGTGTGAAAATTTGAATTTTGAGTTAATAGTTACAACTTTATTGAAAGAAGATCTTCACTATGAGGATAGTTTGCAATTAATTGGTAGTTTCATAAACAAAGTGATGCTTCAAAGTGAAAAATTAAAAGCCTTGCATGAAAGAAAAGGTTATAAAAATTATGTTTTTAGCAATTTTTATCCATTTGAAAAAGATAAAATATACAAAAGTGGCCGAGTGTATGTATTTCGATT # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.61, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATATGATGTATTTAAAC # Alternate repeat : GTTGAACAAAAACATATGATGTATTTAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [14-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //