Array 1 193537-193814 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCTK01000005.1 Bacteroides uniformis strain BIOML-A4 scaffold5_size193901, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 193537 47 93.6 30 ....................GCT........................ AAGCCGTCCGCATCGTACAGTCTCACGGCA 193614 47 100.0 30 ............................................... TTTTTTGCCATCATTTTCTCACCAAGTTGT 193691 47 100.0 30 ............................................... CCCTTCGCAGGTATTCGTTATGTTCATCCT 193768 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 4 47 98.4 30 GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Left flank : TGTTCTGTATGGCAGGGCCTGCTTTCCATATTTCGTCCAGAAACACGACATCGGCTGTGGGCAGATAGCCGTCGATGGCACGTTCGTACTTATCGGATTCTTTCAGCCGGCTGATGCTGACGGGACCGAATATCTCGTCGGGTGTAGAGAATCGGGACATCAGGTATTCGAAGGCACGGGCATCTGTAAAAGCAGACTTTAGCCGCCTGGCTACCATTGACTTGGCTACTCCCGGAGGCCCCAGGAGCAGGATGCTCTCACCTGCCAGGGCTGCCAGCAGGGAGAGGTTTATTTCGGTTTCTTTTTCGTATACTCCCCGGTTCATTTCGGAAAGGAGGAGGCGGATGCGTTGGATCATTTCCACAATATGATTTATTTATAGTCAGTACTCATGTATAAAGAAAAGTGTGTAAAGATACCAAATAGTAGCGAAATCAGAGAGATTCTTATTAAGATTCACTATCTTTGGAAAACAAATACACACAGACACGCACACACAC # Right flank : AACTTACGCATGTAGCTAACACTTGAAAAGGGACCCGGGTAGCATTTGAAACGTGTACCACCCGATAGGTTTTGCAAAGTTAATTAA # Questionable array : NO Score: 5.78 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.30,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 76633-76202 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCTK01000022.1 Bacteroides uniformis strain BIOML-A4 scaffold22_size76739, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 76632 47 100.0 30 ............................................... TCAAGTCCTTTCTTAGATATACCTATATGA 76555 47 100.0 30 ............................................... GTGCTGCCTATTCAAATATTCTTCCTTCCA 76478 47 100.0 29 ............................................... TATATCGTTCGCTGAGAATTGAATATTCT 76402 47 100.0 30 ............................................... AAATGAACATTATGGCGAAGAAGCCATTCG 76325 47 100.0 30 ............................................... GTTAATTTTTATAATCTCGCCACAAAAATT 76248 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 6 47 100.0 30 GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Left flank : TTTGTTCGGTTAAACATACCCATGGGTGGGGCACTTTTTAAATGTTGTTCCGGGTCCCTTTTCAAGTGTTAGCTACAAACTTACGCATTTTTAATTACATTATTTA # Right flank : CGTGTCGGTGTCCCACACATAGCCACACAAGTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGCCTTGAATAATTCTAAGCTTTTTAAATTTCAGTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGCAATCTCTTTCGCGTAATCAATAACGAATTGTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGCCCGTTTTTGTTTGTAAATTTGTATTGTTTAGTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGCGATGACCGTCGTAACCGACGGAATCGACGGGTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGCTGATACACAATATAGGGCATTTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.00,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //