Array 1 1277-3479 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMVN010000010.1 Alistipes shahii strain 1001713B170131_170501_D7 NODE_10_length_150031_cov_51.4159, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1277 36 100.0 30 .................................... AAAATCGAATGCACTGCAAAATCTGCTAAA 1343 36 100.0 30 .................................... AGGGTCTGTGGCTATTCATCCGGCCGCAGA 1409 36 100.0 29 .................................... GACCACATTGATTGGAACGAAAACACGAC 1474 36 100.0 30 .................................... AAGCATTTTGGACGCTCGTTTCGTCTATAA 1540 36 100.0 29 .................................... TATGGCGGACAATTACCGTTTGACGCGTT 1605 36 100.0 30 .................................... GCTGGCGCTGCCTATGTTGGTCGCAAGGCT 1671 36 100.0 30 .................................... AAAATGTCGAACGTGAAATTGCCTATATTT 1737 36 100.0 29 .................................... TTCGCTCCCGGCGATTCTACTGCTATTGC 1802 36 100.0 30 .................................... TTCGCCTAGAGCGCGAACTCGCCTATTGCA 1868 36 100.0 29 .................................... TTCAACTTCCTCTTGACGCCCTTAAGTGC 1933 36 100.0 30 .................................... AACCCCAGGTTGGCGCAACCCTTGCCGTTG 1999 36 100.0 29 .................................... AACGCTGACAGACGAGGCGGGGGCAATTC 2064 36 100.0 30 .................................... TTCGCCCTCTGATTTCGATAAAGGTGAGAA 2130 36 100.0 30 .................................... GGAGGTAGCCGTTATAGTGATTGGCTGGAG 2196 36 100.0 29 .................................... GCGTACGCTGTTCGAACGTGCGGGGTTCT 2261 36 100.0 30 .................................... TCTTTCGCGGAGTGAAGTCAATACCCATAG 2327 36 100.0 30 .................................... GGTGTCGGCTTTGTCCCTGCTTGGTCGAAA 2393 36 100.0 30 .................................... CTTCTGCGAGAGTTCGTGAATTGCTGAAGG 2459 36 100.0 29 .................................... TACACTCGTCGTAGTATGTTTGGGAAGAA 2524 36 100.0 29 .................................... TGTTGACGAGGAAGATGCCTTTTTGCAAC 2589 36 100.0 30 .................................... AGGGTCTGTGGCATACCTGTGTGCTCCCAC 2655 36 100.0 29 .................................... CAAACGAAGACGGAAGGTGCCAAGAAGTC 2720 36 100.0 30 .................................... GCGACAAGATTTCGACCTCGCGCAACTGGG 2786 36 100.0 30 .................................... CGTGTAACGATTTATCATTTGTTTTCCGCT 2852 36 100.0 30 .................................... TCCGGAATCATCTTTATCGTAAATTCGCGA 2918 36 100.0 29 .................................... TCCGCTTGGAACGCGAACTTGCCTATTGC 2983 36 100.0 29 .................................... TTACCCCGAGCGAGGGCGTTGCGTATTTC 3048 36 100.0 30 .................................... CCCGAGCTGATCAATCATGCTGAGAACTTG 3114 36 100.0 30 .................................... CACATACGAGAAACCGAGAGAACGTTGCTG 3180 36 100.0 30 .................................... TCCTGCAGTCGTTACCAATAACCTCTAGCA 3246 36 100.0 30 .................................... AACAACCAAGACCACCCCATGGCCTTCTGC 3312 36 100.0 30 .................................... TCTCCTCCAGAATGCCAGCCATAGCCATAA 3378 36 100.0 30 .................................... TACACGACGCGCGACGTTTACGGGAACCCG 3444 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 34 36 100.0 30 GTTGTATCTTATTGAAATTCTACATCAAACCACAAC # Left flank : GTAATCTACAAGAACAACACCAGCCCTTTATGCCTGCTTTTCTTCCATGATAACCGCAAGAAATCGGTTGGTTTGGGTGTTTCCGTAGTCCGTTCCTGCTGGGATGCACAAGCACAAAAGGTAACGGACGACTGCCCTGACAGGGACGATATTCAGTTTCAGATAACAGCCAAAATCAAAGAGTACGAGAAGAAGATTAAGAAACTGGAAGCCCTCGAAATCCCTGTAACCTTTGAAGCGCTGTTTGAGACCATTGGTAAGCGTATGGATTGTACGGTAGGCTATTATTTCAGACAGATAATCGACAGATTGGAAAAGGTCGAAAAGTATGGTTCCGCCAGCAAACACAAGGTAACACTTGCCCTTATGTCGCAATTCCGCTCGGTCAATATGCGTTTTGATGAATTGGATTTGACGTGTTTAAGGGAGTTTGAAATCTTCTTGAGTCAAAAGGGTAATGTAAACAACAGCTGCAATTATGCAGCATTCCAATACTGACA # Right flank : CGTCGGGCCTCATATTGATTGATAAAGTGTTACTTACGGGCTGTCTGCCACTATAAAAATACGATCGGGTGTTCCGACGAAGCCAGTTTGATGCATTTTCCGTATTTCAAAGAACGAAAATAACGATTTATCAGAAAAATTCCAATTGTTGCGGAATTTCCGGTTTTGCTCGTTCGCTTTTACCCCAAAAATTTAATATGTCTCCATACTGTTTGTCCGTTACAGCAAGAATACTTGTAAATCCTGTCGGAGGCATCGATCGTCGAACCCGCTTAATGTGAACCTGCATATTCTCCTTCGATGCACAATGGCGCACATAGACTGAATACTGCATCATTGTGAAACCATCTTTTTCCAACGCCTTGCGAAATTGCACCGCATGACGTCGTTCCGTTTTTGTATTGGTTGGCAAATCAAAAAAGACAAACAACCACATGATTCGATAAGCATTCAAGCGTACTTCTGACATTCGACTACTCCAATAAAGGATATGCAATCTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTATCTTATTGAAATTCTACATCAAACCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA //