Array 1 27465-27717 **** Predicted by CRISPRDetect 2.4 *** >NZ_PIZC01000012.1 Actinomyces sp. 594 NODE_17_length_27738_cov_217.107895, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 27465 37 94.6 35 ...G......A.......................... GACTCTGCGGCGGGCGCTTCGAAATCGAGGATCTT 27537 37 100.0 35 ..................................... ATTCTGTCCTGGACTCCGAAAAAGAAGTCCTCTTC 27609 37 100.0 35 ..................................... TTCAGCTGCGTACTCGAAAATGTTCTTGGCGCTCA 27681 37 89.2 0 ..........A...........C......G...G... | ========== ====== ====== ====== ===================================== =================================== ================== 4 37 96.0 35 GTCAGGAAGCGCCTCGCACCTCAAGGTGCATTAAGAC # Left flank : TCGCGGTCTGCTACGTCGGTTCACCGTTTGCTACGCCACTTAGCCGTTTGCTGAAGGCCTCTGAGGTATTCAGCAGGCCGTTAACTAGCGTTGTTAACGGCGAAGTGGCGTAGTAAAGGCGCGGCGGGGTGGTGGGTGCTCGCGGTCGTTTGCGGCGGTAGTGTCGGTGCGGCGGGGACGCCTGGAGGTGACGAGAGCGGTGGTTGCGAGTGTTGCGTGTGATGCAGTTGGGGTGTGTGGGGCTGGTGTGGCGCCTGCCGGGAGGCTACAATTCGGTCTACGGTACAAAGATAGGTGCATTTTGACCCTGACTTTTCTGCATGACTTCGTTGAAAGTTGGTGGCTGGAGGGGGTCTGAGGGGTGTCGGTGGCGCTTGGCTTGTTTTCAACGAAAGGTGGTAGTTTTGGCCTGGTGCCAGTCGGTTCCGTGGGGTGCTTGCGGAGCCGGTGGCGATCCCGGGCCTGGAAGTGGCGGTATGGCGCGGTTTCCAGGGGTAGGG # Right flank : TATTTGCGGGTGGCCGCTGTGGTGTGATGTCTCAGGACATCGGTGACAGTTCTGCCTCAGGACATCGGTGACACTTGGTGTGTCAGGACATCGGTGACACTTGTGGTTGTT # Questionable array : NO Score: 2.66 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGAAGCGCCTCGCACCTCAAGGTGCATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.00,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA // Array 1 17395-16774 **** Predicted by CRISPRDetect 2.4 *** >NZ_PIZC01000015.1 Actinomyces sp. 594 NODE_20_length_75676_cov_205.419815, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 17394 37 97.3 36 ...................................G. TCTACCTCCTGGGTGCTGTCAAGGGTTTTACCCTCG 17321 37 100.0 35 ..................................... CATATCTCCAGCGACGGAGGGGATCATATAGGTGG 17249 37 100.0 37 ..................................... CCGCACTCCAGGCACTTCAGCGTGACCTCCGGCTCGC 17175 37 100.0 36 ..................................... TCCATTCGTCGAGGCTTGTTTCGCAGGCATTCCTCC 17102 37 100.0 36 ..................................... CGCTGTCGCGATAACACGACATAGACCCCTCCGCTC 17029 37 100.0 40 ..................................... TCGATAGTTGCAGTCTGTCGGTCGAAGGTGAAACCTTCGA 16952 37 100.0 35 ..................................... GCAACGTCGCCGCTCTTCCTGTCGATCTTGTACCG 16880 36 89.2 34 .....A....G..-.......T............... GGGCATCCGGTGATGCCGCCGGCGATTATGTCGG 16810 37 70.3 0 .C....G...........T...C..AC..GAC...GG | ========== ====== ====== ====== ===================================== ======================================== ================== 9 37 95.2 36 GTCAGGAAGCACCTCGCACCTCAAGGTGCATTAAGAC # Left flank : GGGCGTTTAGAACGCCGGTTCGCGGTCTGCTACGCCACTTAGCCGTTTGCTGTATACCTCCGCGCCCTTCAGCAGGCCGTTAACTAGCGTTGTTAACGGCAAAGTAGCGTAGTAAAGGCGCGGCGGGGTGGTGGGTGCTCACGGGTTGTCTGGGGCGGTGGCGTCGGTGCGGCGGGGAGGCCTGGAGGTGGCGAGAGCGGTGGTTGCGAGTGTTGCGTGTGATGCAGTTGGGGTGTGTGGGGTTGGTGTGGCGCACTCCTGAGGGTCACAATCCGGTCTACGGTACAAAGTGTGGTACGTTTTGACCTCGACTTTTCCGCATGACTTCGTTGAAAGTTGGTGGCTGGAGGGGTCTTTGGGGGTGTCGGTGGCGCTTGGCTTGTTTTCAACGAAAGGTGGTAGTTTTGGCCTGGTGCTAGTCGGTCTCGTGGGGTGCTTGCGGGGTCGGTGGCGATCTCGAGCCTGGAAGTGGCGGTATGGCGCGGTTTCCAGGGGTAGGG # Right flank : CGCTTCCGGGGCGGGGCACGAGAACCGCGTCGTAGACGCCTCGGCCAGCACGCGCCGCCTCGGTGACGTAGGCTTGAAACATCGCCTCGACTCCGCCACCCTCCTGCCATGACCTCACGCCCACACGGCTCCACCGATCCCGCCAACCCAGATGCGGCGGCCCACGCCGCAGTCCCCGACCTGCCCGCGCCGCGCGATCCGGCCGCGCCCTACGGCGTCGTCATGGTGTGCACCGGCAATATCTGCCGCTCCGCCATGGCTGAGGTCGTGCTCATCGATCGCCTCACCGCCGCGGGCATCCCCACCGACGGTCCCGGCGGCGTCGTCGTCACCTCTGCGGGCGTGTCCGACGAGGAGTCCGGCAACCCCATGGACCCCCGCGCCCGGCAAGTCCTGGCCGAGGGCGGCTACGGCGTCGGTGCCGACCCGACTGCGCGGGCTACCGCCACGGCGATCGCCGACCACGCCGCCCACCGCATCAGCGACGTCGAACTACGCCG # Questionable array : NO Score: 3.02 # Score Detail : 1:0, 2:0, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGAAGCACCTCGCACCTCAAGGTGCATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.60,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [23.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 208726-206132 **** Predicted by CRISPRDetect 2.4 *** >NZ_PIZC01000048.1 Actinomyces sp. 594 NODE_66_length_220912_cov_204.594894, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 208725 29 100.0 32 ............................. ACCGTCCTCGCTGTCTTCCGCACGGTGGCTGG 208664 29 100.0 32 ............................. GTGATCTCCACAGGCTCGTTGGCCAACACCAT 208603 29 96.6 32 ............................C CCATGGCGGTTGATTTCTCGATCATGGGAGCG 208542 29 100.0 32 ............................. CGCTGACATCACGCGACCTCCTTGTCGCCAGC 208481 29 96.6 32 ............................C CGCACGCTCAATACGCACATCCATCTCGCTGA 208420 29 100.0 32 ............................. GACCAGGGCATTACCGACGGCTCCCTGATGTC 208359 29 100.0 32 ............................. CGAGGCCGCCCCACACCCGCAATTGGGTGTGG 208298 29 100.0 32 ............................. GGAGGCCCGACCATGGCAGACGACCAGGAGAC 208237 29 100.0 32 ............................. GTCCAGGGTGTCTGCCCGGTGACGTAGGTGTT 208176 29 96.6 32 ............................C ACCACGTCGCCCGGGACCGGGCTGGTGACAGG 208115 29 96.6 32 ............................C AGCTCCCCCACATAGTTGGGCAGGTTGTAGGT 208054 29 100.0 32 ............................. ACGAGCAAGCGCCGGCTGGATTGGTCTCGTGG 207993 29 100.0 32 ............................. CACTCATGAGAGATCCTCCTCCTGACACAAAC 207932 29 96.6 32 ............................C GCCGCCTTGGGGGCGGCGAGCAGGAATACGCC 207871 29 96.6 32 ............................C ACCGTGTACCGGTGGCGCGACGGCCGCGAGGA 207810 29 100.0 32 ............................. ACGGCGGCGAGGGCCCCGAAAATCAGCGCGAG 207749 29 100.0 33 ............................. CGCGTCCCGGTAGATCGAGCTCTGCTGGATGGC 207687 29 100.0 32 ............................. GGGCGGGCACCGCCGGCGCGGACTCATTAGCG 207626 29 100.0 32 ............................. AGCATCCGGACGGCACTCACCGGCTGCTACAG 207565 29 96.6 32 ............................C CCCGGAGCCCCTGCCGGTGCGGGGCGGCTCGT 207504 29 100.0 32 ............................. GCTGTGGGGGCTGGCCGATGAGCCCGCCGCCC 207443 29 96.6 32 ............................C CGGAGCCTGCACTCCCCGGTGACCGGCGCGCC 207382 29 96.6 32 ............................C GCGTCCAGCACGGCGTCCTCGGTCAGGGCACT 207321 29 96.6 33 ............................C ACGCCGGTCACGAAGTTGATCAGCCCCCTGCAG 207259 29 96.6 32 ............................C ACGTTCCGGGTGCCGACCACCTGCCTCGGGGC 207198 29 96.6 32 ............................T GCACGTCGTATACCACGGAAACGCCCACCTGG 207137 29 96.6 32 ............................C CGCGTTCAAAAGCCGTGTCCAAAACCCCCGCA 207076 29 96.6 32 ............................C CAGAAGCCCGACTACCGCACCCGGTTCATGTT 207015 29 100.0 33 ............................. AGTTCGACACTGACGCGGTGCGGGCGCTCGCCA 206953 29 100.0 32 ............................. GCCAGGTTGGTGAGCCTGGTGCCGGTGACTAG 206892 29 93.1 32 .............A..............T CCGCGCTCACCGACGGGTGACGGGTACCCGTC 206831 29 96.6 32 ............................A CCGACGGCGCACCACCATTCCAGATCGGACCC 206770 29 96.6 32 ............................C AACGACGGAACCCCGGCCGCTGGGGACCGGGG 206709 29 96.6 32 A............................ GACGACACGCCCCCGGAGCGGCCCTCCAGGCC 206648 29 96.6 32 ............................T CCGGAGCCGCTGCCGGTGTCGGAGCGTGTGGT 206587 29 96.6 32 ............................T CCTGGGAGGACGCCCCGCCGGGGGCCTTTTTG 206526 29 100.0 31 ............................. CTCAATGACCTCGTCGGCCGTGCGCGGGAGA 206466 29 100.0 32 ............................. GACGCCGAGATCGCCACCGGCATGGGCCTGGT 206405 29 96.6 32 ............................T ACATAGGTGCTGGTTGTAGTACTGCCGCACGG 206344 29 96.6 33 ............................C CTCGTCGGCCCGGAGAAGGCGCGGGCCGTGCTC 206282 29 96.6 32 ............................C CGCGCCGTCCACGATCCGCGCCGCGGCCGCCA 206221 29 100.0 32 ............................. CATCGCTAGAGCAGCTGTCTTGTAAACAGCCG 206160 29 75.9 0 ...A.......A.....T.C..CA..G.. | ========== ====== ====== ====== ============================= ================================= ================== 43 29 97.5 32 GTCGACCCCGCGCGAGCGGGGATGATCCG # Left flank : ACGCCGTCTAGTTGCCGGTGGCGCGAACTACTCGGAAGAGGATGCGGGCGGATGGTAGTGCTGATTCTTTCCGCCGCGCCCGCCTCTCTGCGTGGCGCTATGACGCGTTGGCTGCTCGAGGTGAGTCCGGGCGTGTTTGTCGGTCGTCTGTCAGCCCGGGTGCGTGAACAGTTGTGGGAGCTCATCAGGGCGTACATCGGCGACGGTAGGGCACTGCTCATCTGGTCCACACGCTCCGAGCAGCACTTCGAAATCGCTTCTCTAGGCCACGATCGCGACCCGGTCGATATCGAGGGCTGCATAGTGATGCGTACACCGTACCGGCAGATCGAAGGAGCCAAGTCGATTCCCGGCGCGGTGAGACCAGCCAAGGAGTCATGGTCGATCGCTGCTCGACGGCGTCGCTTCCGCAACTCGGCGGAGCGGGCACTAGGTCAGCAGTAAAGGAATCACGTGTAGAGTTTGCTGTCGTGGCGTTGGGATTCCAAGGATCCGCAAGT # Right flank : CCCCCACCGACCGCCTCACTTCATCGGGGAAGCGCTCATTCCCGCCCGAACCAGTCCTCCAGCCCGTCTGGGACCCCGACCCAGGCCAGTGCCTCACCCATCTCCTCCGGTCGCAGCAGTATCCGGTGAAAGGCGTCGGCAACGCGCGCACACTGCGCCTCATCCGCAATACCCGTGACAACCAGGTGGCAGCGCGGCACCTCCCCACCGCCCTGCTTCTCACCGCCCTGCTTCTGCCCTAGAGCCGCGCCCTCCAGCGAATTCACTTTCACACTCAGCGCTGCATCCCAGGGCCCGGCATCCCCCACACTGACAACTCCACCGGCCACCTCCCAGGTACACACGCGCCCAGGACGGCTGGGCAGCCAGAAGCAGCCGCGGGCGAGCAAACCATTACCGGCCAGATCGGCGACGAATTCGCGCAGCCGCCCCGGGTGGAAGGGCAGCTCGGAAAACAGGTCCAGCGTGCGCACCCCGTGCTCAATGGGTCCTCCCCACGC # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.63, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGACCCCGCGCGAGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGAGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 170501-173275 **** Predicted by CRISPRDetect 2.4 *** >NZ_PIZC01000034.1 Actinomyces sp. 594 NODE_49_length_196990_cov_200.371078, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 170501 36 100.0 36 .................................... AGAAGTAACTTCTAACCAGACCAGACCTGACCTGAG 170573 36 100.0 36 .................................... ATGATGTAAGCGTATCCGCTAGCACCGGCACGGCGT 170645 36 100.0 36 .................................... TCCTTCCTTAACTGCCCTGCTTGCCGCCCTGCTTGG 170717 36 100.0 35 .................................... ATCCCGGGGCGTGTTTCGGTATAGTCACGCACGAG 170788 36 100.0 36 .................................... ATGATGCAAGCGTATCTGCTAGCACCGACAAGGCGC 170860 36 100.0 35 .................................... ATCTGGTCGGTGAAGTTGTCCAGCTCCTCCTGTGA 170931 36 100.0 36 .................................... ACCTGGGAGGAAAACATTCACGACTGGGACAAGGGG 171003 36 100.0 36 .................................... ATTAACCGCTGAAGCATAGTCTTAAATGACGTGCCA 171075 36 100.0 35 .................................... ATGTGCGATACGGTAGACCGAAACACCGGCCTTGG 171146 36 100.0 35 .................................... AACACACCTCACAAGGCCCTCATCGACACACTCAC 171217 36 100.0 35 .................................... CAGTAGCCAATCCAGGCGGGCGGGCATGAAATCAG 171288 36 100.0 36 .................................... ACCGCACGCAACCGCGTAGGTTACCGCCGTCGTGGT 171360 36 100.0 35 .................................... CTGCGCTCAGGCGTCAGCCAGGACAGGAGGGTGCG 171431 36 100.0 36 .................................... TCCACCACAATCGCCTTGTACTGGTGGTGCTCGGCG 171503 36 100.0 36 .................................... CGGCGGTGGTCAGCTCGCCGCTCATGAGCTGGGCAC 171575 36 100.0 36 .................................... AGTGTGACCTCCGGCTCGCTCACTTGGTCTCCTCCC 171647 36 100.0 37 .................................... GTCACCGACAGCACGTCAACAACACGCGTCAACGCCG 171720 36 100.0 36 .................................... AACGCCTGGCAGCGCCGCCACAACCTCTAAGAGGCA 171792 36 100.0 36 .................................... TCTCTTGCCGAATACAAGGATCGCATCTCTCAGGAG 171864 36 100.0 36 .................................... ACGATGCCACGCGGATAGTCATGCGGGTACAGGTAC 171936 36 100.0 38 .................................... ATGAACATCGGCATCATCGCCGGTGGCGCAGTGGGCGC 172010 36 100.0 36 .................................... CAGATGCCGCCGAGGAAGAAGTGCTGGTAGCCGCGG 172082 36 100.0 35 .................................... ACACCCCGGGCGAGCCCGCGAGCGCCCCGCCTAAG 172153 36 100.0 37 .................................... TCTGCTTCCCGCCCGTTGGTCCACTCAACGGGAGCCG 172226 36 100.0 36 .................................... GGGTGCGCCGGGTCAGCATGAATACGATTTCACAGC 172298 36 100.0 36 .................................... AGTTCGACGCAGAGCACTTTGGACATGTCATCCTCC 172370 36 100.0 37 .................................... GAGTAGGTGCCCTGCCGGATGCCGAGCAGCTCGGGCG 172443 36 100.0 38 .................................... ACGGCCTGCTCGCCGCCGACGGCGCGCACCCACTCCGG 172517 36 97.2 37 ..............T..................... AAGTCCCAGGACCGAATCCTGCGCTTCAAGCCGGCGC 172590 36 100.0 36 .................................... CTTGGCGTGCAGCCATTGGAAAAACCCGGTGAGTGC 172662 36 100.0 36 .................................... AGCTTCATCTCCCGCCGCAACGCCGGCACTGCCCGG 172734 36 100.0 36 .................................... AGTCAGCGGGCCGTCAAGGCGCTCAAGGTCTACGGC 172806 36 97.2 36 ..........T......................... ACTGGAGGCCGGGTCACCGCCTCCGATCACAAGAAG 172878 36 97.2 37 ..........T......................... TGAGCGGCCGCGTCGGTGGTGGCGTCAACAAACACCT 172951 36 97.2 35 ..........T......................... CGCTGACGGCGGCAACAACCCGGTCGAGGAGCCGA 173022 36 100.0 37 .................................... GCCGTCTCAATGCCTAGTGACTGGCCGAGCACGTCGG 173095 36 100.0 37 .................................... GGCACCCTGATCCTGTCCGCCATGGGCCGCGGCGGGA 173168 36 94.4 36 .CT................................. TCACCAATGTCCGCGTGCAGATCCTCATTCGACAAT 173240 36 86.1 0 ..T.........C..................A..CG | ========== ====== ====== ====== ==================================== ====================================== ================== 39 36 99.2 36 GTCTTCCCGGCCTTCATGGCCGGGCTCCATTGAGGC # Left flank : ATGTTGGGGGAGCTGGATGACTACACGGCGATGGTGACTAGATGAGGACGAACCGACGCCGATATCTCATCGCGTACGACATCCGCAAGCCCGGGCGGCTGCGCCGGATCTGCAAGCTTATGGAGGCCAACGGCGAACGGCTCCAGTACTCTGTGTTCATCTGCGACCTGAACCGGACCGAGCTGGTCCACTTAAGGGCTGACAGTGAGGAGATCATGAACCTAGACGAGGACTCGGTGGTGATCGTCGACCTCGGCGAACTGGGGGAGGACCGCTTCACGTTCGTCGGTAGGCGTGCGGGTCTGCCCACTCAGGGGGCCCAGATTGTTTAGCGAGCGCTCCGGTGCTGCCCCGATCCCAGGGGAGTGCTCGAAAGGGCGGTATGACAGGGTTTTCTGGTTGTCGGCGGACCAGCGGACACGATTCACTTGCCCGTTTCTGCGGCAGCGCTCGCGAGACCGCGTAGAATCCTTGACCAGCCGCGGCAAAATCCGCGAGCT # Right flank : GGTGTCAGGGGCAACCTGATGCCGCAGGCCGACCTCCGTCGGTCGCTCTGTCACGCTCCGCTCGCGCAGACGCGCGCCCGCTGCAAGGTGCCAACGCGGAGGGCCCGAACCGCCGACCTGCGGTTCGGGCCCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGAACTGGGCGATGAAGATCTTCACGATCATCGCTACCGGGTA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCGGCCTTCATGGCCGGGCTCCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-15.90,-15.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 79321-79575 **** Predicted by CRISPRDetect 2.4 *** >NZ_PIZC01000069.1 Actinomyces sp. 594 NODE_164_length_84802_cov_211.870056, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 79321 37 100.0 36 ..................................... CGCCGACATCACCATCAGCACGATGCCGAGCGCCTG 79394 37 97.3 36 G.................................... AGCAGCAGACGACGACGCTGTCTGATGGCACGGTGG 79467 37 100.0 35 ..................................... GGGCCTGGACTGCTCGGGCCTGATCTACTACGCGC 79539 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 4 37 99.3 36 TGCCTCAATGGAGCCCGGTCGTGGAGACCGGGAAGAC # Left flank : GTGGGCGCCTCTACAACGCCCCGTGGCGCGTCGGCCCGAGGCAACTGTATGCGCCGACGCTCCGCTTGCTTGCGGTCGATCGGCGCCAGTCTTTCGAACCGCAAACAGCCACATGTCCCAGACGCCGCCAACCCCCACCTCTACAACCTCAAACGGGAAGAGCCACTTACGTTCTCCGTGTCCAAATCGATGACAAACACTGCCTACGGCCGCGGGGGCCGATCTGACACCCGCATGATTCCAACGTTCTGTTCGCGGCCGCTGCCGTCTCCTACCTCGTTTGTCATAGATCTGGACACTCCCTGCCCTCGCCTGCCGGATATCCAGCGGCAAGCTGCCCGGCGTCGACGGCGGTCGGCGAGCAGGCGAGCATCCGACACTGCATGCGCTGGACACCACGCCACAGGCCCCATTCCCATGCGGAGAAGCCTGTTTTGTCGCCGCGCTTCAGTGGAGCCCGGGAAGACGATGGGTGGAAGCTGGCCCGCCGCCGGGGCATC # Right flank : CAGCTCGCTGTTCCTGCCGCAGCGTACCAAGGATCGTGCCTGATCTCGCGAGCGCTGCCATTGAAACGTACAACTCGGCCACGGTGTCCCGCTCGGGGAATGGTGAGAAAACCGTGTCACGCCGCGAACTCGAGCGCTGCCCAGGGAATCGGTGGACACCGGAGCGCTCGCACGCAGTCGGAGTCCTTCGGTCCGGTGACCCTGCGTGTTGATTAACGAGCATGAGGCGTTCCGCCTCGAACTCGCGGTGCGCACACGCGCCAGGCTACCCTCAACGAAACAGCTTCTACCGATACCGGTGATACGGGGACGCTGCGGTACGCGGTTTGTTAGCGGGAGCGCCAGGAGCGCAGGCCGGCCTCACCGGCAGCAATCGCACCGAACAGAGCGCCCGCAATCGGCCAGATCATCCAGCTGATGTCCCAGCTGGAGCCGATGAAGGACCAGGCGAGGTAGATGGCTATGCACCCGATCCAGTACGGACCGGCGATCGCCTCAAT # Questionable array : NO Score: 2.82 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGCCTCAATGGAGCCCGGTCGTGGAGACCGGGAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-14.60,-13.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.68 Confidence: LOW] # Array family : NA //