Array 1 16829-15734 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP035007.1 Staphylococcus schleiferi strain OT1-1 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
     16828	    36	 100.0	    30	....................................	TGAGTGTTGCGAATCAAGTAGGAGTTACAC 	
     16762	    36	 100.0	    30	....................................	ATTTCGTTGAATTTGTTAATGTAAGCCATT 	
     16696	    36	 100.0	    30	....................................	CAACTTTAGACGTATATTCACATTTGTTAG 	
     16630	    36	 100.0	    30	....................................	TGTATTCTACAACTTTAAACATGATAAAGA 	
     16564	    36	 100.0	    30	....................................	TGTTTTACGATAACAAAGGAGGCAACTGAT 	
     16498	    36	 100.0	    31	....................................	AAACATAATTCTTTGAAACAAGGTTATCCTA	
     16431	    36	 100.0	    30	....................................	CTCATCTTTAAAAAACCTTGAGATCTCTTC 	
     16365	    36	 100.0	    30	....................................	TATCAAATTTGATTACGGGTGTATGCCTAT 	
     16299	    36	 100.0	    31	....................................	TTTTAGGTAAGGATTTGTATTATGCGTATCA	
     16232	    36	 100.0	    30	....................................	CAAAAATAGATTTTACAGGTGGAAAAGCTA 	
     16166	    36	 100.0	    31	....................................	ACGGTGGAAAACTTGAATTTGAAGCTGATCA	
     16099	    36	 100.0	    30	....................................	TTGAACTTGCTACAAACTATTTAGGTTTAG 	
     16033	    36	 100.0	    30	....................................	TAGGGTATCTGTTCCAACCTGGTGGCTGGT 	
     15967	    36	 100.0	    30	....................................	ACTGGCTAGGTCAGTTGTGGGCGAAAATCC 	
     15901	    36	 100.0	    30	....................................	TAGGGTATCTGTTCCAACCTGGTGGCTGGT 	
     15835	    36	 100.0	    30	....................................	AGATTATACGGACAAAATAAAGAATCACAA 	
     15769	    36	 100.0	     0	....................................	|                              	
==========	======	======	======	====================================	===============================	==================
        17	    36	 100.0	    30	GTTTTAGTACTCTGTAATTTTAGGTATAAATGAAAC	                               	       

# Left flank :   ATTATATTAGAAATGAAAAGCAATTATTGACAGCAGAGTTTATTAATCATTTGGTATGGGATGCACCACTTAATTTTGAAAAGCATGAAATTAAACGTAGCTTAGAAAAAATTATTCAATTATATCAAGAGGTCATTGAATTAACACCGAAGATATCAAATTATAATTTAGCTGATATCATTGTGTTTGAGCCAATAGATATCTATGTTGTCATAAGATACCTTAAACATGCAAATCAAGATTTTGTATTGGATATCCATTATGATAATTTACCGATTGCTGTAGCGAAATATATCAAAATGTATGATTTGAAGTTTAATAAATAAATCTAAAAGCTTATTATAGGGAAGGGTTCTAGCGCTTGGTCAATTGACTTGTAAATCAATCTATTAATCAAGCGCTTCTACATTATTTTAAATAAAAATAAACGAAAATTTAAAAATGTCTAACATAAACTTGCTTATAATAATCATAAAAATAAGCTATAATTATGGCTAGAG
# Right flank :  ACTATGCAGAGTTCAAAAGATTAGTAGCCCGTTTTAGTACTTTGTAATTTTAAATGAATACTTATTACTGATTGTTATAAAATTTGTTTATATAAAGACAGAGATGTTTTCTAAGATACCTCGTGCTTTTTATTGATTGTATAGCACAAAAAGTCAGAGAAAAATTTGTGAATGTTTTTAACATTTGATATTAAAAAGGACAAAAAACTTAATTATCATTATAACTATGTAAATGATTATAAAACTTGTGTCTTTATATGCAGTACTCTAAGTTTAATAAACAAATTAGGATAAATTTTAAAATTGCTCAAGACTCATATAATTCAATATATGAAAAATGCAAGAATACTAAAATCAATTGACAAGTATTCTTGCTACTGGTAAACGTTGTGACATAAACAATACGGTAGCTTTGTCTATAAAAGTATAAGCTCATTGATGTGAATCTGCTATATACATCAATGAGCTTTTATTTTTTAAAGTACTTGTAGAATGAATAC

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTACTCTGTAATTTTAGGTATAAATGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.00%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-3.60] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [71.7-76.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,4.87   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
//