Array 1 45101-47036 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSVK01000006.1 Ligilactobacillus salivarius strain FJLHD25M7 Scaffold6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================== ================== 45101 36 100.0 30 .................................... TGAAGAAATAAAGTAACTACACTATTCCTT 45167 36 100.0 30 .................................... TACGATCTTGATTATTGCACCGTTAGCTAA 45233 36 100.0 30 .................................... CATACGTGCAACAGCAAGCTTGCGTTCTTC 45299 36 100.0 30 .................................... CCTCCTGCGCGCATTTAACGTCTTGGGAGA 45365 36 100.0 30 .................................... CATACGTGCAACAGCAAGCTTGCGTTCTTC 45431 36 100.0 30 .................................... CCTCCTGCGCGCATTTAACGTCTTGGGAGA 45497 36 100.0 30 .................................... CATACGTGCAACAGCAAGCTTGCGTTCTTC 45563 36 100.0 30 .................................... CCTCCTGCGCGCATTTAACGTCTTGGGAGA 45629 36 100.0 30 .................................... CATACGTGCAACAGCAAGCTTGCGTTCTTC 45695 36 100.0 30 .................................... CCTCCTGCGCGCATTTAACGTCTTGGGAGA 45761 36 100.0 30 .................................... CATACGTGCAACAGCAAGCTTGCGTTCTTC 45827 36 100.0 30 .................................... ACCAACCGTTTTCTATTATGAGAATGCAAT 45893 36 100.0 30 .................................... ATAATAATATTGTTAAACATACGCTCAAGT 45959 36 100.0 30 .................................... ATTATTTCCAGTTACTCTTTCTTTAAACAC 46025 36 100.0 30 .................................... GGCTCAAAAAGTTATCTGGGGTGCGTTCTT 46091 36 100.0 30 .................................... TAGCCGGGCAGTATAAACAAGCATTTTTCC 46157 36 100.0 30 .................................... GTAAGTCTAATAACGAACTAAACGCAACTT 46223 36 100.0 30 .................................... CAATCATAGATTTTATAAAAACATTGTTAA 46289 36 100.0 30 .................................... ATATTTTTACTTGAGTTGCGAAGGGTTGCA 46355 36 100.0 30 .................................... AGATGTCGGTGGAATATAGCCCATGAACTG 46421 36 100.0 30 .................................... CCTACTTCTTTTTTATTAATCGCATTATTG 46487 36 100.0 30 .................................... CGATAAGATTGCAGAAATTACTAACTTGAT 46553 36 100.0 30 .................................... TATCTAATGTATTTTATGGATCACGTCAAA 46619 36 100.0 30 .................................... TTGCTGTCTTACACCTATGTCAATTCAACT 46685 36 100.0 30 .................................... AAGTTCACACGAAAAGCCCTATGACAATAC 46751 36 86.1 29 ..........T.........T...A......G.T.. ATCTGCGTTCAGTTGGTGTCTCAATGCTC C [46784] 46817 36 94.4 82 ........................A..A........ ACAACTGGAGTTTGAGTACGTTTAGCTTGTGTTTCAGAAGTATGTTAAAAACCTATTATATGTTATAATATGAAAGTGTTTA 46935 36 83.3 30 .....G....T.........T.........G.T..T AGTAATTCACCGCTAGTTAAGTGGTTTTTT 47001 36 80.6 0 ..........A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ================================================================================== ================== 29 36 98.1 32 GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCGAATTAGTAAAAAGTATATGAATGTATTAATTAAGAAGATTATTGAAGACATCACAGACGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGAGAGGTTTTGTATAAAATTGATATACCATTACAAGTAGATTATGACAATGATTTAACAAGACTATTTAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAATGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTACATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTAACG # Right flank : CTAAAATACAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGATATATTATGGTTGATAATGTAATATTATATGATATATAATATAGTTGAAGATGAGATATAAAAGAAAGTGAGGGATGATGATGAAAATTCAAGTTAGTTCTGATTTACTAGATGGTTTAGTATTAGCGCTTTTAGATAAGCAAGATTATTATGGATACTCATTGACACAGGATATGCAAAGAGCAATTTCAATTTCAGAATCAACACTCTACCCAGTATTACGAAGGTTAAAGAATAATGGTTTATTAGAAACATATGATCAATCATATCAAGGGAGAAATCGTAGATATTATCGCATAACAAATAGTGGGGAAGAACATTTAGGAAGAGTTAAAAAAATGTGGAGCGACTACAAAGTTAGTTTAGATTCAATTTTCGAAAAAAACTAGGGAGGGGGAATAATAATGAAC # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.12, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //