Array 1 123661-123334 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOLS01000012.1 Pseudomonas citronellolis strain LMG 18378, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 123660 28 96.4 32 ............A............... TGGGCGACCGGGTGCAGCGGGATGACAACCAG 123600 28 100.0 32 ............................ AAGCACGCCGGCCTGATCACCGACCTGCGCGA 123540 28 100.0 32 ............................ TACCGGCCGGGCCGTTCCATTTGCTTCGTCGT 123480 28 100.0 32 ............................ CAGCCCAGCGAGGTATCCAGTACCGGCTGCCC 123420 28 100.0 32 ............................ AACCCCGAGCTGGTCAAGACGGGACTGGACCG 123360 27 96.4 0 ........................-... | ========== ====== ====== ====== ============================ ================================ ================== 6 28 98.8 32 CTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : GCGCCAGCAACTCGCCGACGCCATCGAACACCCGGTTCTCGTACAACCCGGTGTCCTTGAAACGCACCCGGTAATGGTTCACCGCCTCCCAGGCCCGCGCCTCTTCGAAGCCATAGGTGCTCATGAAGCACTGCAGCAGCGGCGGACCGATGAAGTGCTCGAGCCGGCGCAGGTCCGGCTCGTCGATGCCCAGCTGTGCCAGGGCGTACTGGATCGAACGGGTGATGCCCTCGCGCGGGTCGGTGAGGGTGCCGTCGAGGTCGAAGAGGATGTTCTGGTAGTGCATGGGCGAGGCTGCGGCAGGAAGAATCGAACCGGAAGCATACAACTGGCCTCCGTACCGACCAAACGCCCATGCAATGACTTCCTGCCCTTTTTCTGGAGCCTCTTGCGAGTCCCATGAAAGTCAATGGCTTGGAGAGGCCCCTGAAAAAAGGGTTATGCGTGTGTATAGGGTGCTTTCTCGTGGGAAGTCAGGGGGTTGAGGAGTAACATCTCTA # Right flank : GCATCGCCCCCTCGGAAGAGCATTCCTGCGCGCCTCATTGCCGTACAAGCAGAGGCGCCCAGTCGCCCCCGCGCCGCCTGTTGCCTTATTCGGCATAGCCCTCGGCGATGTGCTGGTCCTTCAGCTTCACATAATTGCCAGCGGTATAGGCGAAGAAGGACCTTTCCTTGTCGCTCAGCGGGCGGGCCTTCTTCGCCGGGCTGCCGACGTAGAGGAAGCCGCTCTCCAGCACCTTGCCCGGCGGCACCAGGCTGCCGGCGCCGAGGATGACTTCGTCCTCTATTACCGCGCCGTCCATGACGATGCAGCCCATGCCGACCAATACGCGGTTGCCGACGCTGCAGCCATGCAGCAAGACCTTGTGGCCGACGGTCACCTCGTCACCGATGGTCAGCGGGAAGCCGTCGGGGTTGTAGGGGCCGGCGTGGGTGATGTGCAGCACGCTGCCGTCCTGGATGCTGGTCCGGTTGCCGATGCGGATGCGGTGCATGTCGCCGCGG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [33.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //