Array 1 1742-320 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAAJBK010000027.1 Lacticaseibacillus paracasei strain VA02-1AN NODE_27_length_27432_cov_53.831533, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      1741	    36	 100.0	    30	....................................	TGTTTTCTCCAGAACAACAGCTTAGACGGC	
      1675	    36	 100.0	    30	....................................	TGACATTGTGGGTATGCAACAAATCACCCC	
      1609	    36	 100.0	    30	....................................	GAAACTTGACAAAAACAATCTTATCTACTG	
      1543	    36	 100.0	    30	....................................	GAATATCATAATGCGGACGACCCATTACCA	
      1477	    36	 100.0	    30	....................................	AAAAGCCGGTGCAATATGCACCGGCTCACT	
      1411	    36	 100.0	    30	....................................	GCACTGATGAAACCGCACAACAGTTGACCG	
      1345	    36	 100.0	    30	....................................	GATCGCGGCACGATTGTAAACGAAGAAACC	
      1279	    36	 100.0	    30	....................................	CCAAATTGGTTAGCACCGCTTAAAGACGAA	
      1213	    36	 100.0	    30	....................................	TATCAGAGGCTTATCCATTAAACAACTGGC	
      1147	    36	 100.0	    30	....................................	AAACTGCCTTCCGTTGCGATCAACTCGCGC	
      1081	    36	 100.0	    30	....................................	AAGCGTTCGCTTGCGCTGGTGTTGGTCTCG	
      1015	    36	 100.0	    30	....................................	TCGTAGCGGCTAACACGCTTATGGCTGACA	
       949	    36	 100.0	    30	....................................	AAAATATTTCTAGAATTAGCAACTTTATGG	
       883	    36	 100.0	    30	....................................	GATCGTTGAAGAAAGGCTGATCAATATGTT	
       817	    36	 100.0	    30	....................................	CGCAAAAAATGTTTTGACAAGAACACATCG	
       751	    36	 100.0	    30	....................................	GGCCAATATCATCAGTCGGGAGATTGTCGC	
       685	    36	 100.0	    30	....................................	ACTCGTCAATATCCTTCTGCATGATCAAGT	
       619	    36	 100.0	    30	....................................	GCAATCGCGATACTTTCACCGATTGCAACA	
       553	    36	 100.0	    30	....................................	AACAAAATAATAGGAGGTTTTTACCATGGA	
       487	    36	 100.0	    30	....................................	ATGACTTTAACAATCAAATCCCAAGTTGTT	
       421	    36	 100.0	    30	....................................	TATTATCCTAACACATCCATCGAGAAGTTA	
       355	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        22	    36	 100.0	    30	GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	                              	       

# Left flank :   AGCTTGATCTAGATAAACTTTTTCAACGTCTAATCTATAAGAGGATGGAGTTGTTGATTGAGAATCAGCGGCTTGTCGAACTGATCGATCAATCGCAACAAATGGCGATGTATTTACTTCAAGATCCATTTTTGAGCGACTTGCCAGTCACGGTTGAACCAGGCGGTAAGCTTGAACAAATCATGAAATACTGCAACGTTCATTTTGATGAGGCTGTCACGACAGAGTCAACCTCGAAGATTGAGGCGCTTATTCAGACGTTAACTAAATTGGAGGAAAAGAAACTTGTCATTCTTACAAATGTTAGTCATTATTTAAGTGCCAGAGACTTTTCGTCGGTGACTGAACAGATCGGTGATACTGAACTTCAAGTCGTTCTCATCGAATTCTCAAAGGTGAACAGAAAGAAGTACTTTGAGAAATGCCAGTATATCTATATTGACGAGGACTTCGTTGACAATCGCGAACTAGATTGATTAGGAGATTGTGTGAAAACACAG
# Right flank :  CTGAATATTCTAATGTTGTTGGATTGAAGTCAATATTTGAGACAGATTTTAAGAGACATTCAGAACCGCGTTTACCTTCCACAGCTCAAATAAATCATCAATTGCGATTAATAACTTATTTGAACCCTGGAAAGCATTAAGTCAGGCGGCCATTTGGCTCGTAAGTGTTGCAATTTCAACTTGTAAGGGGGTCTGGTAGCCCAGTGAACTATGAATTCTCTTCCTATTGTAGAAAGCATGCACATATTCAAAAAGGACGGCAGCGGCAGTTTCATAATCTTCAAAGACCGGCACTGGATAAACACATTCCTTTTTGAGGG

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 95% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-2.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,4.87   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//