Array 1 865821-866318 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZSU01000002.1 [Clostridium] ultunense DSM 10521 scaffold_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 865821 30 100.0 36 .............................. CTGTACGGCAATATACCACAATGCAGAAACAAGTAA 865887 30 100.0 36 .............................. CTCTTGCAGCTTCTTTGGATACATGAAATTTATATG 865953 30 100.0 38 .............................. TGTTGCTGTGTATTTCTATATTTATCAAATCTATTTTA 866021 30 100.0 36 .............................. ACATAGCTACATGCAAACCTGTTTTGATTACATCAG 866087 30 100.0 37 .............................. TGATTAAATTAGCTATCTTTGGTCATCTTTTTTTTAC 866154 30 100.0 38 .............................. ACAATACAGGGGGAGCAGAGACGACATATTGTATCAGA 866222 30 100.0 37 .............................. AAGGAAAAGGGGAATAATTCCCCTATGATATGAACGT 866289 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 8 30 100.0 37 GTTTATAGACTACCTATAAGGAATTGAAAC # Left flank : TAAATATGATAAAGGAGTTTTCAATATAAACAATTCAATTCTATATATAGATAGTGGTCTGGGGAACAGTATATTCCCTATTAGACTCTTTAATAGAGTACAGATAAGTAATATAACTATACAACCGATAAAGAATAGTTAACATAGATAATTAAAAACATTTGACCTTAGATTAAATTCCATTTATAATAGTAGTAGGATAGATAAGCACCCTTAGCTCAGTTGGATAGAGTCGCTGACTTCGAATCAGTTGGCCGGGGGTTCGAGTCCCTCAGGGTGCGCCAATTTTAATATAGGTTTGTGATATAAGGTTCCATAATAAATTGTCGTCGACCTCAGGTAGTGCAAAAATCCCTGGGGATCGACGACAATTTAATATTTAAAGCAAATCTGTTAACTCCAACAAGTATAAAGGAAAAAAGCAAAAATCAAAATTCAAAAATCCAAGCATTTCTTATTTGACAAAAAATGAGAAACATAGTAATATCAATATATGTAAC # Right flank : CCTAACCAATACGATGAGGAACGTGTTACGTGGTTTGGTTTATATGGATCTATGTCAATAGTTTGGACAAAAATTTAGGTTTTTTTGTGGGTCTCCGCCACCATTGACAATCCAAACATAAATGCTTTTAGGTTTCTACCCGAAGGCGATAAACTCAAAGCAAGCTATGTTTTGTGCCTTCGTGGTGGAATATTGTAGCATTTATTTATTGGCTTATCAATGGCAAGCCCTACGGGTGGCTATCATCCCCTCAGGCTCAAAATCTAAAGCAAGCTATGCTACTCTACATAGATTCTCATATTCATCTGGAGTCATGTAGTTGATTGATGAATGAATCCTTTTTCTATTATAAAATCCTTCTATATATTGAAATAATATTAACTTAGCATGATTATGATCTATAAATGTATTAAGATATACGCATTCTTTTTTTAGTATTGCATGAAAACTTTCTATACAGGCGTTGTCATAAGGACAACCTTTAGCACTATACGATAGTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGACTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 2 869439-869734 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZSU01000002.1 [Clostridium] ultunense DSM 10521 scaffold_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 869439 30 100.0 37 .............................. CCGATACCACCGGGTAAGTGGGAGAAAGGAGATAATT 869506 30 100.0 36 .............................. AACCTATCATGACACAGGAAGAATTTGATAGAGCTA 869572 30 100.0 36 .............................. AAGAATTGATGCAATCAGAAGAAATGCAGAGTATTT 869638 30 100.0 37 .............................. AATATATGGGCGAATAACTCATATATACAGTAATGTT 869705 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 100.0 37 GTTTATAGACTACCTATAAGGAATTGAAAC # Left flank : GTTTTCCACTTGTTTCCAGGCTTTTCCTTATGCTTATCATAATAGGTGCTTCTAGGATATTTTAGCACCTTGCACATAGTATCTATGCTGTGTTCCTTAGAATTAGCTTTTATTATTTCAAATATAATATCAGGATTTATTTGGTTGCGAATATGGCCATAGCTTTTTTTAATATATCATTTTCTTCCTTAAGTCTTGCATTTTCCTTCTTGATTTTTAGAATTTCTTCAAGATTTGTGGTATCTCCCTTTACATCTATCGGTGTTTTCTTCTTTACCCAATTACGTATTGCTGTTTGGCTTAGGCCATATTCGTCTGCTACTTCCCTAACTGTTTTTCCTGATAATACTAACTCTGCAATCATTATTTTGAATTCATCTGTATAAGTTTTTCTTTTAGACATTTTATGGACACTTCCTTCCTCATTTAGTAGTATATAAAAAACCTTATTTAGTGTCCATACTTATATACTAACATCAGAGGTGCTATATGGAAAGTGA # Right flank : CTTGGGGTAATCGGAGATGGTGGATAGATGGTTGTTTCGTTTATAGACTACCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGACTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 3 871297-872862 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZSU01000002.1 [Clostridium] ultunense DSM 10521 scaffold_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 871297 30 100.0 36 .............................. AACCTATCATGACACAGGAAGAATTTGATAGAGCTA 871363 30 100.0 36 .............................. AAGAATTGATGCAATCAGAAGAAATGCAGAGTATTT 871429 30 100.0 37 .............................. AATATATGGGCGAATAACTCATATATACAGTAATGTT 871496 30 100.0 37 .............................. TTGGGGTAATCGGAGATGGTGGATAGATGGTTGTTTC 871563 30 100.0 37 .............................. GTTGCAAATTTTTCATTGTATGGAGTAACGTCTACAA 871630 30 100.0 38 .............................. TTTTATTCCAAACCAATACAATCCCCTCCTTGAATTTA 871698 30 100.0 37 .............................. TGTCTTCCATGATAAGGACATGTAATATATTTAGTTT 871765 30 100.0 37 .............................. TAACACATATAATAGATTTTGTACTCAGAGAGAATAT 871832 30 100.0 36 .............................. TAACGAAAGATGGTGCAAAGAACTCAGGAGAAGAGC 871898 30 100.0 37 .............................. TGGTCCTATTATCATCTATTCTTATTTCTGCATTGAT 871965 30 100.0 37 .............................. CCACTTCATCTTTCGCACTATCTTTTAACCAATCAAG 872032 30 100.0 37 .............................. CTTGTGTATAGTAATGTATAGTTGAAGGGTTTATATA 872099 30 100.0 36 .............................. ATATGACAGAAGAAGGTTGTAGTGCTAGAAAACGAA 872165 30 100.0 37 .............................. GAATATGGGAAAAACAGCCAGAATTTGAATTTATTGA 872232 30 100.0 37 .............................. AGAGGTGATATAGTGATAAAAATAAAAATATTAGACA 872299 30 100.0 37 .............................. AGAAGAGAAGTAGTAACTACAGATGAGCTTGGAGCTG 872366 30 100.0 37 .............................. GATGTAAAATGATACTCTCAGACTTGATGGCGGTCAT 872433 30 100.0 37 .............................. CTCTCGTGAATAAGCCATCTTGACATATAAAGTTGAT 872500 30 100.0 35 .............................. TTTCAGTGGTGATCGGTCTTATGGTGATTTTGCCG 872565 30 100.0 36 .............................. TTGGGTAGATCGGTTCTACCCAGTGACTAGAATATT 872631 30 100.0 37 .............................. ATGGGTAGGTGAGTAAATGAAGAAAATACTACTTGAA 872698 30 100.0 37 .............................. ATATGACTCAGGCTACACTTCAAGAATATGCATTTGC 872765 30 100.0 38 .............................. GATAAACAAAGTGGAGTATATTGCACGAGTATGGGCCT 872833 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 24 30 100.0 37 GTTTATAGACTACCTATAAGGAATTGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTGAAACCCGATACCACCGGGTAAGTGGGAGAAAGGAGATAATT # Right flank : CACATAGCTTCTTCATCAGTTAATCCTTCTTTTATAAGTTTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGACTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : NA // Array 4 875219-875383 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZSU01000002.1 [Clostridium] ultunense DSM 10521 scaffold_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 875219 30 100.0 38 .............................. GAAATTCCCTCTTCATTACAAATCCTCCTTTTAATCTA 875287 30 100.0 37 .............................. TTTCACCTCCTCACATATCCCCTTTGCCTACATTTCT 875354 30 96.7 0 .............................T | ========== ====== ====== ====== ============================== ====================================== ================== 3 30 98.9 38 GTTTATAGACTACCTATAAGGAATTGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCCTGATATATTTGGTTCACCAACTATTGCTAATGCAATATTAGACAGACTCCTTCACCATAGCCATATTATATCTATCAAAGGGCCATCCTACAGAATCCAATCTAAAATACAATATTTAGATAATAATAGGGTAAAGGATTCTGGGGTCTCATAGTCCACTTTTTGTACATAGTTATTTTCCACTTTTTAGACATTCTTATATTGACATTTACA # Right flank : TAGAACCATTGTAGGGTATTTTGTACTGGAATTAATTAAAATTATAGTATCCATTTTCACACAGTCTGCCATTTCTATTCGACCAATTTGCTGCTCTAGTTCCTAAGTTAAGATGAATAAGAACAAGGTTTGTTATAGCTACCACAGTTATCACTATTTTGTTCATTTTGATGAAATCACTTCATATATACATATCTTCTTTATTCCAGTAGTTATAGATAAAAAGGGAGGATTTAAAAGTATCTGCTAAAGAATTAATAACTAGAAAGTACATGAAGAAGTTTTACTCTTAATTAGAAAATTGTATGAAAAAGACCATTGATCATGGTATGGTATCTTAACGATGTTACAAAGTTGGGTTATAAATCTATAACGCTATAGGAATAAATTATATCTCGTTTTGATACCTTGGGAGTTTTAATTTTTGAAGATAAATTAGAGAAATGCTTTCTTTAGGAGACTGTGAAATAAATTGTGTATGAAAATCCTCCAGGTTAAGG # Questionable array : NO Score: 8.31 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGACTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 377695-378057 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZSU01000003.1 [Clostridium] ultunense DSM 10521 scaffold_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 377695 30 100.0 35 .............................. TTTCAGTGGTGATCGGTCTTATGGTGATTTTGCCG 377760 30 100.0 36 .............................. TTGGGTAGATCGGTTCTACCCAGTGACTAGAATATT 377826 30 100.0 37 .............................. ATGGGTAGGTGAGTAAATGAAGAAAATACTACTTGAA 377893 30 100.0 37 .............................. ATATGACTCAGGCTACACTTCAAGAATATGCATTTGC 377960 30 100.0 38 .............................. GATAAACAAAGTGGAGTATATTGCACGAGTATGGGCCT 378028 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 6 30 100.0 37 GTTTATAGACTACCTATAAGGAATTGAAAC # Left flank : CCTAATTTTTCTGATTTAGCAAGACAATATGGCTTGGATAGAAGAACCGTAAAAAAATATTATGAAGGATATGAAGGAAAACCTAAAACTAGAAATAAAACAAGTAAATTAGATAAGTATAAGGATGAAATAATTGAGAAGTTACAGATTAAGGGAATTAAAGTAAAGGCTATCTATGAATATTTCTTGGACAAGGGTTATGATGTTGGAGGATATTCCAACTTTAACAAATATATTAAGAATAATGATTTAAAGCCTACAGCCAAGTCTAAAGGACATCCAAGATTTGAGACATTACCCGGTAAACAAGCTCAGGTGGATTGGAAAGAGGATGTAAAGCTAATATCAAAGTATAATGAAGAATTTATCATTAATGTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGAATAAGCCATCTTGACATATAAAGTTGAT # Right flank : CACATAGCTTCTTCATCAGTTAATCCTTCTTTTATAAGTTTATTGTAAATGGTAAAATGAAAATGTACAATTAATGGAAAATAAGAATGTACAAAAGTGTACATTCTTGCTATCCTGATTTTAGGGAGGGATAGCAATGGAATGTAGCTTAAGAGCACAGTTAAATATAATAAAACTTATGGATCTAAAACCTAATTTTTCTGATTTAGCAAGACAATATGGCTTGGATAGAAGAACCGTAAAAAAATATTATGAAGGATATGAAGGAAAACCTAAAACTAGAAATAAAACAAGTAAATTAGATAAGTATAAGGATGAAATAATTGAGAAGTTACAGATTAAGGGAATTAAAGTAAAGGCTATCTATGAATATTTCTTGGACAAGGGTTATGATGTTGGAGGATATTCCAACTTTAACAAATATATTAAGAATAATGATTTAAAGCCTACAGCCAAGTCTAAAGGACATCCAAGATTTGAGACATTACCCGGTAAACAAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGACTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [36.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : NA // Array 2 380243-380407 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZSU01000003.1 [Clostridium] ultunense DSM 10521 scaffold_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 380243 30 100.0 38 .............................. GAAATTCCCTCTTCATTACAAATCCTCCTTTTAATCTA 380311 30 100.0 37 .............................. TTTCACCTCCTCACATATCCCCTTTGCCTACATTTCT 380378 30 96.7 0 .............................T | ========== ====== ====== ====== ============================== ====================================== ================== 3 30 98.9 38 GTTTATAGACTACCTATAAGGAATTGAAAC # Left flank : AAAACCCACTTGGCAACCTCAATAGGAATAGAGTGTGCTAGAAATAGATATTCAACATATTTTATCTCTTTTCATGAATTAATTGCACAACTTAAAAAGGCACTTTTAGAAAACAGGTTAGAAACAAGACTTAAACATTTTGCGAAGTATAAGATATTAATAATTGATGAGATTGGTTATTTACCAATAGATTTAGATGCTTCAAATCTATTCTTTCAACTAATAGCTAAAAGATATGAAAAGCATTGTACAATAATAACTACAAATTCAAATTTCTCAAAATGGCCTGATATATTTGGTTCACCAACTATTGCTAATGCAATATTAGACAGACTCCTTCACCATAGCCATATTATATCTATCAAAGGGCCATCCTACAGAATCCAATCTAAAATACAATATTTAGATAATAATAGGGTAAAGGATTCTGGGGTCTCATAGTCCACTTTTTGTACATAGTTATTTTCCACTTTTTAGACATTCTTATATTGACATTTACA # Right flank : TAGAACCATTGTAGGGTATTTTGTACTGGAATTAATTAAAATTATAGTATCCATTTTCACACAGTCTGCCATTTCTATTCGACCAATTTGCTGCTCTAGTTCCTAAGTTAAGATGAATAAGAACAAGGTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 8.31 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGACTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 3 817493-815181 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZSU01000003.1 [Clostridium] ultunense DSM 10521 scaffold_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 817492 30 100.0 37 .............................. GACCAAATCATAAAGTGCAAGGCGCCACTGTTATTGT 817425 30 100.0 37 .............................. AAAATCTCAGGGAAACCAGTGCTAGAAGTAGGAACAG 817358 30 100.0 37 .............................. GAATTACTTTCGTCTATTTCTACACCATATATCTTTT 817291 30 100.0 38 .............................. GAATCTTAGTAAGGCAAGGCGAACTTGAACCTGCTTTT 817223 30 100.0 36 .............................. GAAGTAGAGCTATAGACTTAGGGATATTTAAACCTA 817157 30 100.0 37 .............................. TCTGACACGCTATCTGGTGAGGTGGTGAGCTTCATAA 817090 30 100.0 37 .............................. TGCTGCAGTTGCTTAAAGAGAATGGCATTTCCCCTGT 817023 30 100.0 37 .............................. CAGGTTTTGTTAATATAATCTATCAATGTAATATTTT 816956 30 100.0 37 .............................. TAGAACAGATCCAGGATTATGAAGATGGTTTTTTTGC 816889 30 100.0 37 .............................. TCCCATTTGTTGCCTATAATCTCCATTGTGTCATCTT 816822 30 100.0 38 .............................. TTGATGTTGACGAAATCAATGGAACTGCAACTGTATTT 816754 30 100.0 36 .............................. CCATCTGGCAATTCTTGTGTATTCACATTAACATTT 816688 30 100.0 37 .............................. TCGTGACATCCAGGATGTCTCTTTTCACAGTCTATAC 816621 30 100.0 37 .............................. AATACTCATCATCTGTTATATCAAATACATCTTCATA 816554 30 100.0 37 .............................. TACCATTTGAAAATTTCAGCCAAGGTGTAACTAACCA 816487 30 100.0 36 .............................. CAAGTGCTAATTGTTTGATATCCTCAGCTTCCGATG 816421 30 100.0 37 .............................. GCGATATAATTCCTCTAACAACTATTTAAAAGCTCAC 816354 30 100.0 37 .............................. TCAAAATCGCCAAACTTGATTAAACATCCAAAATAAA 816287 30 100.0 37 .............................. AATAGTAATGCTTTTATATTAATTATTAAAGATGAAA 816220 30 100.0 37 .............................. CCAAAGTAATCCCTTATATATCTCATATTGTTTTCCA 816153 30 100.0 37 .............................. GAACCTGCTTGTGGTATGGGACACATTAGTAAGGTTT 816086 30 100.0 37 .............................. AAACCTCCAAATAGAAATATGATTAGTAGAAATGTTC 816019 30 100.0 37 .............................. GTAAAACCTTGTTTTTGTAAATCTATAATGTACTCAA 815952 30 100.0 37 .............................. TAAGTGTCACTCATGCCATAACCCGAATCCATAAACA 815885 30 100.0 37 .............................. ATGGTCACTTCGTAGCAATAGAAGTCAAAGGATCCGG 815818 30 100.0 38 .............................. TAGTCAACATCTGCATCTGCTGCTATGTCAATATTTTG 815750 30 100.0 37 .............................. TAAACTCAATAGTTTCACCATATAAACCCAGTAACCC 815683 30 100.0 36 .............................. ATATTTTATACCTGCTATACCAATAATTGTTAATTT 815617 30 100.0 38 .............................. TTGGGCAGATCGGCTCTACCCATATACTATGCTACTAT 815549 30 100.0 39 .............................. GTATTTGTGCTAGAGATATTTCATAAATACTGCCTTCCC 815480 30 100.0 37 .............................. TTTCCTGAATATGTAGCAAGAACCTTGATTGAATCTA 815413 30 100.0 38 .............................. CTGAATTGTTTGGTATTTTAGTTGATTTCCTGTAATTA 815345 30 100.0 38 .............................. ATGGATGATGGCAAGATCGTAAGTAACGAAACAGGCGA 815277 30 100.0 37 .............................. GTAGGAAAAATAGATAGGGATAATCCTAGAACTGAAA 815210 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 35 30 100.0 37 GTTTATAGATTACCTATAAGGAATTGAAAC # Left flank : TGTTTCAAGATGGTAATAGGTGATACAAATGTTTGTAATATTAGTTTATGATATAGAAGTAAAAAGAGTTGCAAAAGTCTTAAAAACGTGCAGAAAATATTTATATTGGGTACAAAATTCAGTATTTGAAGGAGAAATTTCCAATGCCAATTTAGTGAAATTAAAACTTGAACTGAAATCAATAATAGATGAAGAAAAGGATTCAGTAATAATATATTCCTTTAGAACTACCAGGTATTCAAATGTAGAAATAATGGGTATAAAAAAAGGCGGAGAGGACAACTTTTTGTAATACACAGTTTTTTAAATGAAGATACAAAACTGTCGTCGACCCCAGGTAGTGCAAAACCCCCTGGAGATCGACGACAATTTATTTTTTATAACAAATGTGTAGATTTCAATAGATATATAGGGAAATAGAAAAAATATAGTATTGAAAATTCAGATGTTTCATATTTGACAAAAAATGAGAAACATAGTAATATCAATGTATAGAATTA # Right flank : TCCCCCCAATAAAAAATCCCACCTGTGTATTTGTCAATTGAAATTTGGTTCTCTTGCAATTTTGGTGATTTTAATGTAGCCTCATTAAGCACATAAGAATTATTAGCATTTTAACCAAATATTTCCTGGTGATTGAATACCTTTATCCTCAAAAGATCAAACTTGCATCTTCCATAACTCATACGCTTAATTTCTTTTATTTTGTTGATTATTCCTTCTAGCAATCCATTTGTATAGCTACTAGTAAAACTGTTTTTGACTGAATCTATATCTCTTTTAATTCCATTAACAAAAGAATTTAATTCAGGAATATTAAATTCCCTTGCTTTTGTCATCCATTTTTCCAATGGTAATTTGTTGTCTAAGAACATACCCTTAAAATTGTCAATCAGCTCTTTTAATTCTACAAGCTTATGGTAGCTTTCTTTAAGGCTTTCTAAAATATTGAGCTCGTCCTTAGTAAGATTGGAATCGTTTTTACATATTATTTTAGTTACAGT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGATTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [63.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : NA // Array 4 834786-830218 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZSU01000003.1 [Clostridium] ultunense DSM 10521 scaffold_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 834785 30 100.0 37 .............................. TAAAAGGAACCGTTTTTCTAGAAAAGGAACCGTTTTT 834718 30 100.0 36 .............................. AATGTTAAACATATACTATAATAATAGGACTATAAA 834652 30 100.0 37 .............................. AGAAGGAAAGAAAAGTTCGACGGGGAAATATATATCA 834585 30 100.0 37 .............................. TGATGGTTTAATCTTATTTTACCGTCTATTACTTCAA 834518 30 100.0 37 .............................. GGGACAGTTTTTATAGTCCTATTATTATAGTATATGT 834451 30 100.0 36 .............................. CAAAAGTTGCATCTCCTTCATCACTCATGGCAATTA 834385 30 100.0 36 .............................. GGGTTATCTACAGGTGCTGTTTTAGTATCAAAAAAC 834319 30 100.0 36 .............................. ATGAAAAAATGAGGAAAAGACAAGAAGAGAGGTTTA 834253 30 100.0 38 .............................. CTACATATGCGTATATGTAGTAGATGAGAAATTGAATC 834185 30 100.0 38 .............................. GATATCATTCCTTTGTTTGTGGCAAAGCCATATTTCTT 834117 30 100.0 37 .............................. AAACTTCAATTGTTTGTTCTGCTTTTCTAATTTCTTC 834050 30 100.0 37 .............................. TTTTCCAGTTCTGGGATTTCCCTTATGTCTATTATTT 833983 30 100.0 36 .............................. TTTTGTAGTATATGGAGAGCCAAATACCGAGTTTTC 833917 30 100.0 36 .............................. TGTGGTGCTAGATGATGAAACTAAGAGTGCTATAAA 833851 30 100.0 36 .............................. CCCAATCCCTTGGACTTGGACAGATGATATGTTTGA 833785 30 100.0 36 .............................. TAAATATCGTGGCAGAAGTGTATTAGAAGGCAGAGG 833719 30 100.0 37 .............................. TTGTACCTCGTTTATGTCCGTTTGGTGAGTTCTGATA 833652 30 100.0 39 .............................. TTATTTCTCCTATAGTCATGATTCCTTCCCCCAATCCAA 833583 30 100.0 37 .............................. CTGCCTTGTACTGTTTTCTATTGATTAAGTTTTCTTT 833516 30 100.0 36 .............................. TTTGACCTGCCTCATCAGTAGGTAGTTGGTCAGTTC 833450 30 100.0 37 .............................. TAATCAAACAGGATATCGCAACGTAGGCTGGGAAAAC 833383 30 100.0 37 .............................. TTTTTTGTTGCTGTTATATAGATATATCCATTGCAAG 833316 30 100.0 37 .............................. ATTCCCTCCCGACCAATCAAATTTACCTTCTTCGTAT 833249 30 100.0 36 .............................. AGGGGGTAGCAACATGAATGAAACTACTAAAAACTA 833183 30 100.0 36 .............................. GCCTCTATTGTACCATGCATACATTGTATACGTCAA 833117 30 100.0 37 .............................. TCCCACTTGACCCACCTGCTGGTAATATAGACCATGC 833050 30 100.0 37 .............................. GTGCTGGTATAGGAGGACCAATAACAGGAGAGGGAGC 832983 30 100.0 37 .............................. CCTGTATAATTTGCTACTGCCTCTGCTGTTCTATTCC 832916 30 100.0 37 .............................. ATAGCACAAACAAACTTTCACTATAATGTGTATAAGA 832849 30 100.0 35 .............................. CAAAATAAATTTCATCTTCATACTTTTTTGTTCTT 832784 30 100.0 37 .............................. CTCCCTCCCTTCTAGTTGGCTTACTCTGAAGTTTAGC 832717 30 100.0 37 .............................. CCGCTAGTATAGTCCCGTCATAGACTCTGCTTTCTCC 832650 30 100.0 37 .............................. GTAGAAGTTGATTTTATAGGTACATTAATAGACATTA 832583 30 100.0 37 .............................. GATGGTCCATAGCATTCAATCCAACCGTAATCTTTAT 832516 30 100.0 37 .............................. TTGGATATGTTTCTCCATGTAGCCAAATCCACGTGCC 832449 30 100.0 38 .............................. TAGCATCTAATGTTTTATTTTTCTGTTGTAGTTCAAAG 832381 30 100.0 36 .............................. TTTCTTTCTTTTCCTCTTTCTTTTCTCTGCCTGTGA 832315 30 100.0 37 .............................. ATACACATGGTCGAATTTCAAAACTTTCAAATACCTC 832248 30 100.0 37 .............................. GGAAATATGGAAAAGACAGCGACGTTGCTAGGGTTAG 832181 30 100.0 36 .............................. TTTTGTTATGCCAGAGGATTTATACGAGGAAGTCAA 832115 30 100.0 37 .............................. TATCTTTGATACTAGGAATAGGCGTAGGAATAGCCTT 832048 30 100.0 37 .............................. TGTGATATTTTCGACCTAGTTCCATCTCCCCATCTAG 831981 30 100.0 37 .............................. CACCTTCTTCTTTCCAAACTGCATTTCCAACTATATA 831914 30 100.0 37 .............................. CCCGACCTAAACACCATCATAGCTGAAAGTAAAAAAG 831847 30 100.0 37 .............................. ATATGGAGGAACAATAAGGTAACAGGAAGTTGTTATG 831780 30 100.0 36 .............................. TTCCTCTGATACTGTTTATGTTTTGTAGCTTTCTAA 831714 30 100.0 36 .............................. AGTAGAGAGGCAAAACCGTCAATTCTTCTTCTTTGA 831648 30 100.0 37 .............................. TCTCAACCCCGCTTTCGTTATTTCAGCATCTATTTTC 831581 30 100.0 37 .............................. TCGGGAGTAAATAAAGATAAAATTGTAGACACAGATC 831514 30 100.0 36 .............................. GACTATATCCAGTGTCGCCATGAATAAAAGATTATT 831448 30 100.0 38 .............................. GGTAGATAGGTCTGGACTGCTTCGTCGCATATGTCTTC 831380 30 100.0 36 .............................. TCAGGTGTAGTTTCGATGATATGTGCATCTCCTATT 831314 30 100.0 36 .............................. TAGATATATGGATGATATTGTCATTCTTCATAGCGA 831248 30 100.0 37 .............................. CTCGAATGTTAGCCATGATTCTGAACTTGTTTCTCTT 831181 30 100.0 37 .............................. TAATCTCGTCTTGTTAGCACAGTCTCCCTCATTTCGT 831114 30 100.0 36 .............................. ATCTTTTTCTGTAACATCTAACCTGTAGTCTATTTG 831048 30 100.0 37 .............................. AAGATAGTCTAGTGAGCATGGAGATAAAGAATGTGCC 830981 30 100.0 37 .............................. TAAGCTTTTTCCACTATTTCAGCATTGGCGTTTGGTA 830914 30 100.0 37 .............................. ATACTAGGCATTTGAGTACCTTCCATGATTATTACAA 830847 30 100.0 36 .............................. TAGGCATGGAATCGACTGGGGGTTTGCCGAAGATCC 830781 30 100.0 38 .............................. TTATAACGATATTGGGTACGGGTGGACCAAGGTGCCTT 830713 30 100.0 36 .............................. TTTTTAAAAGGCTGTAAGCCCATTAAAATCAAACTT 830647 30 100.0 35 .............................. TTTGTTTTTCCTTTTCTCTCACTCGTCATCACCAC 830582 30 100.0 38 .............................. ATCATATAAATCACCTACCAGTCTAGCATGCCTATAGC 830514 30 100.0 37 .............................. TTATTTGTGTGCCATATCCCTCAAAATCATGAGGTAG 830447 30 100.0 37 .............................. GTAGATCCACAAGTGATTTCTCTAACCTAATAAATGA 830380 30 100.0 37 .............................. ACATTTTTTTGCAATATATTCAAAATATTTATACAAT 830313 30 100.0 36 .............................. ATTCTCTCTCTTCATCAGATAAAACTCTCCCATATT 830247 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 69 30 100.0 37 ATTTATAGACTACCTATGAGGAATTGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAACGTGGCAATACAAGGAAGGATACAAAGTAGAAGCTGG # Right flank : CTCTTGCTAAAAACCCATTATCTACTAATACGATTTATAACCTATCTATGAGGAAAAAATCTATTCTAATATTTAACTAATTGTTGGGTATATATTTATTTGGGGAGCCTATTATATGTAAAAAAGTAAAAATTAGGCTTAATATCGTAAAAATGAAAAGGGGGATTTGTTTTGGCTAAACAAACGATTTTTGTTGATGAGTTTACCGATGGTATTCTTGATCCAAATAAGAATATGTTAGGTCCTGTTAAAGATGGTGGAACTATTGTAGCTAATACTGCTCCAGGTTGTTGGGGGCCTATGATAACACCAGAATTAAAAGGTGGTCATGAAGTAACGGTACCTGTCTTTGTTGAAGGAGCGGAAGTAGGAGATGCAATTGCTATATATATTGAATCTATAAGGGCAATTTCATCAGTTGTTGCTTCTGGAAACGATGAAACTGTAGATAAGAACTTCATAGGAGATCCTTTTGTTGCTGGTAGATGTCCTAGCTGCGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTATAGACTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA // Array 5 838538-835576 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZSU01000003.1 [Clostridium] ultunense DSM 10521 scaffold_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 838537 30 100.0 36 .............................. CAAGGATTAATAGATGATGATTTAGACTTGGTTACA 838471 30 100.0 36 .............................. ATTGATTTTGGTAAAGCTGCAATTAAAACTTCATCA 838405 30 100.0 36 .............................. CAATTTACTTTGAGGAGGTAGAATAATGAGTAAAGC 838339 30 100.0 36 .............................. AAAAGGAAGTGATAAACAAAAAACCACTATCAAATG 838273 30 100.0 38 .............................. TCCCACCCTCCTGGAATTCACCCAGCATCTTTGTGCCA 838205 30 100.0 35 .............................. ATCTCATATATCCTAATTCAGTATTCTCTACATAA 838140 30 100.0 37 .............................. TTGACAGTGCAGATAGCTGTGGTAAAGATGCTATAAA 838073 30 100.0 37 .............................. ATCCAGAAGCTATTGAGATAAGTGAACAAAGATTAAA 838006 30 100.0 36 .............................. ATAAATGTTACTGTATGGATAATTTAGAGCTAATGA 837940 30 100.0 36 .............................. ACAGATAAGGTGGTATCTAATATAAATAGGCAAAGT 837874 30 100.0 36 .............................. AGGCTTTAATTGCTGTGAATATTTTTCTGTTAGCTT 837808 30 100.0 37 .............................. AGAGTGATTATGGTGGATAGCCAAGGTAGAGAAATAC 837741 30 100.0 37 .............................. TTGTATGCATGGTCTTGGATTATATTATGGGACTTAT 837674 30 100.0 36 .............................. AGAGATGTGAATAAAAAACCAGTCCCACAATATTGG 837608 30 100.0 37 .............................. GAACTAAATATAAAGGTGAATTAAAACCTTTTGCTAA 837541 30 100.0 37 .............................. TGCTGACGACTTGGTTAGTGGTATTGAAGAAGCCTTG 837474 30 100.0 37 .............................. CAACAAATATAAACGAAAAACTATTGAAGGAAGTAAA 837407 30 100.0 37 .............................. CTCCAATCGTATTTTTCTCTCACACAATCCCCTCCAC 837340 30 100.0 36 .............................. CTCACAATATGCTACATCACTTGAAAAAATGAAAAT 837274 30 100.0 36 .............................. TTTGTGCATCTATGGATTCTTCATTTTGATTTTCTG 837208 30 100.0 37 .............................. CTATTTGAATGTTATTTCTACTGCAATACTCTTTTAT 837141 30 100.0 34 .............................. TGTAAAATAAAAAGGACTAGGTTTCCCTAGCCTT 837077 30 100.0 37 .............................. TAGACATAGGAGATGCAAGTCCTAATTCAGTTAACAG 837010 30 100.0 37 .............................. GAACAGAAAACCAGAAGAATGGAGAGACAAAAAAACC 836943 30 100.0 37 .............................. TAGGAGCAGATACAGCAGGAGAAGGTTCAGATTGGAA 836876 30 100.0 37 .............................. GATGAAATGGTAGCTGATAATGAAACATACGCAAATG 836809 30 100.0 37 .............................. AATAATGAAGCAAGAAAAGAGATGGAGAAATCTCTAA 836742 30 100.0 37 .............................. CTTGCCTATTATAGTAATCATATTCATGCATGTGCAA 836675 30 100.0 37 .............................. GCCTCATATACGCATTGATTAAGTGTAAGCCCTGTGT 836608 30 100.0 37 .............................. TAGATATATAGCTGACAGAAAAGTTCCAAAGTATATT 836541 30 100.0 37 .............................. TCCTTTCTTCCAATTCCTCATCTGTTTTAACTTTAGG 836474 30 100.0 37 .............................. AATGATGGTATGAGCTTGCCAGCGTTGCAAAAAATAC 836407 30 100.0 37 .............................. CACAAACAGTAGGGGTTAAAGGTGAATTTATTTTAAG 836340 30 100.0 37 .............................. GCAAAAGGAACTATGAATTGGCAAGGTGGAATAGCCC 836273 30 100.0 37 .............................. CAAGAAAGATGAAAGAAAGATACCCAGAGGTAGATTA 836206 30 100.0 38 .............................. TATACAAAAAATGGGGATACTGGGACGGTGTTCCTCAT 836138 30 100.0 36 .............................. AAGTGTCTGGAAACATATCATCTTCGTAGTCGTAGA 836072 30 100.0 37 .............................. TAGCGTAACCACCCAACATGTTAGCGATTAATTCTGT 836005 30 100.0 37 .............................. CCCTCCTCTAAATATTTTTCCAGTTGTTCTTCTATAA 835938 30 100.0 37 .............................. TTCTAAATCTATAAATGGTTTAATATCTGATTATTGT 835871 30 100.0 36 .............................. CTGATAAATTTGAAAGATATAAGGTAGAAAAGAAAC 835805 30 100.0 37 .............................. CACTTTTTCTCACACTCTTACGCTTATAGTGTAATGA 835738 30 100.0 37 .............................. CTTGTAAAGGAAGCGGTGGAGATATTGAGTATGATTA 835671 30 100.0 36 .............................. GTGGCAATACAAGGAAGGATACAAAGTAGAAGCTGG 835605 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 45 30 100.0 37 ATTTATAGACTACCTATGAGGAATTGAAAC # Left flank : CAGAAATAGCTAGAAATATGGTCACAAAATACGGTATGAGTGATAAATTTGGAATGATGGGGCTAGAATCCTCTAGTGCCCAGTATTTAGATGGAAGTAGTGTGAAAAACTACAGTGAAACTACTGGTAAAGAAATAGACGATGAAGTATTAATACTGATAAAAACTGCTTATGAAAAATCTAAACAAATATTAGTGGATAATATTGAGCTACTTGACAGAGTATCTGAAAGATTGTTAGAAGTAGAAACTATTACAGGAGAAGAGTTTAATCAAATAGTAAAAGAATATAAAGAACAAAAAAATAAGTAAACATATAAAATTGTCGTCGACCTCAGGTAGTGCAAAAATCCCTGGAGATCGACGACAATTTCATATTTTTGAGGAATGTGTAAATTTCAATGAGCGCAGAGAAAAATTAGAGAAAGGTAACATTTAGAATCCCAAAATTTCATATTTGACAAAAAATGAGAAACATAGTAATATCAATACATAAAATTG # Right flank : GTAAAGACGTTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTATAGACTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [15.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA //