Array 1 5649-4960 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_VIOP01000046.1 Vibrio cholerae strain P2-CHT15-00 46, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
      5648	    28	 100.0	    32	............................	AGAACAACGACACGCCCATCGAGTAACCACGG 	
      5588	    28	 100.0	    32	............................	TAAATCTCATTGGGTTAAGATGTCTAAATGGT 	
      5528	    28	 100.0	    32	............................	TTGCGACGTTGACGGTCGAGGGTGATCGGGTC 	
      5468	    28	 100.0	    32	............................	ACTGGCTTGCCTTTGTAGGAATTAAGCCCTTT 	
      5408	    28	 100.0	    32	............................	GCCATGAGAGTGCCCGATAGGATTAAAACAAG 	
      5348	    28	 100.0	    33	............................	CATCAGCACCGCTTTACGGTCTTGCGGTTGGAT	
      5287	    28	 100.0	    32	............................	TTTAGTATCAGTTCCTCCATCTGTCTAAGCTC 	
      5227	    28	 100.0	    32	............................	ACCTAGCCGACCTGGTAGATCTGCACGATAGC 	
      5167	    28	 100.0	    32	............................	TTGGTGCTGAGGGTAATGCAGGTGTTGTTAAT 	
      5107	    28	 100.0	    32	............................	TTTTAGGGTGAGTGCCTCTGCTCAGGTATATG 	
      5047	    28	 100.0	    32	............................	TCGAGAAGCGCAGTCACTCGTTAACCTCAGTT 	
      4987	    28	  92.9	     0	.................C......A...	|                                	
==========	======	======	======	============================	=================================	==================
        12	    28	  99.4	    32	GTTCACTGCCGCACAGGTAGCTTAGAAA	                                 	       

# Left flank :   GCACAAGATGGTAATCATAAAGTTTTCGAAAGCGAGACAGACCTAGTTTATCCACCAGATTTCGAACGATTTTTAATGTACCTAGAGACAACAATACGTTCAGCAATTCAATTTTTAGATGAGCTTTGCGCGGCTCTTGGTGAAACTATTGAAAAACCGACACCTCAGGAGCAGAAGCTGGAGCATTGGCTAAAAGCCGGTGAAACAACATTTGAGTTTATAAAAAAATAGGTATAACAAACTGTTCAAGAGGGATTCGCAACGCGTGGCATTTTCACTATGCGTTGGTTTTAGTGTTTAAGGCGGTATGCGGCTACTTCGGTATTGCGTTGCTCACCCCTTAACAGAGCGTTAACTGGCAATGAAATTACCCATCTTTTCTCGTTGAGTTTTAAGTTATTGATTTATATTGATAATAAAACCAGTAAAAATAAAAGGTTATTTTGGGAAATTTGATGTAATTACTATTATTAACAATAGGTTACTGCTAAAGTTTCATA
# Right flank :  TATTTATAACTTTGGCATTTGGGATCGGCCAGTTAACAAACGCCTCAAAGGGACTGCCAACGCGTGGCGTTTCCAGTCCCAATGAGCCGCGGTGGTTTCGGTTGTTGTGTTTGAGTTTAGTGTTAATGCGTTGTCAGCCCCTTAGGCGGGCGTTATGTGCTTGGAGGGGATATGGAAATTCAGAAAGTTGTACCTGCTGATTTAGATGCGGTTACAAGCCTCGTTTCAGAAGTCTCAAGTATAGATATATTTCCTTTGCTCAATGCCCAAGGGAAGCAAGAGTTTATCGAAAGAGTTATTCCTGATTTACGTGCAGTATTTGATGGTGAAAAGTTTTTAGCACTTAAGGCTGTCCTAGGTGGAAAATTGCTTGGTTTTGGTGTTTTGCGTGACGGGAATTATTTAACGCACCTATTTGTATCGAATGAAGTTCAAGGCACCGGTTTGGGTCGCGATTTACTTAATCACTTACTCGCTTCAACCAAAGCTAATGAAATTAG

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGCACAGGTAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [6,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCACTGCCGCACAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-1.80,-6.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [56.7-76.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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