Array 1 908793-909615 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AHMO02000008.1 Leptospira broomii serovar Hurstbridge str. 5399 ctg1134731807512, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	====================================	======================================	==================
    908793	    36	 100.0	    36	....................................	AATAAACATCGTATGTCGTTGGTGCTGTCCACGTGA  	
    908865	    36	 100.0	    34	....................................	ATTGTCCTAGGGACTATATGAATCAGGTATTGGA    	
    908935	    36	 100.0	    36	....................................	TTGCTCCAAAATTCCATTTTAACCAACTTTGAGTTA  	
    909007	    36	 100.0	    37	....................................	TCGTCGGTGCTGTCCACGTAAATGGAATCGTTTGCGT 	
    909080	    36	 100.0	    35	....................................	GCAAGGGAGCGGACGAGATTCGTAAGATCAAAGAA   	
    909151	    36	 100.0	    34	....................................	ATGTCATAGTGTGACCCAGTTCCAGACGTTCCGA    	
    909221	    36	 100.0	    36	....................................	CAAGTATCGATCAAGGTGGTGATAGGCTTCCAAGGG  	
    909293	    36	 100.0	    34	....................................	GTATCTAATTGCGCCGGTTCCAACATCGATATCG    	
    909363	    36	 100.0	    36	....................................	ATTTGAAACGGGTGTTGGAACTCAGCCACATGTCCG  	
    909435	    36	 100.0	    38	....................................	ATTTTAAGATTTCAAGCCTTGGATCTTTTATTTCTGAA	
    909509	    36	  97.2	    35	........................C...........	TACAGGACTCGATTTGTAATGGGAGAAGATCCAGG   	
    909580	    36	  88.9	     0	....................AT...A........T.	|                                     	
==========	======	======	======	====================================	======================================	==================
        12	    36	  98.8	    36	CTGAAACTAACTTTGATGCCGAAAGGCGTTGAGCAT	                                      	       

# Left flank :   AATTGGCAAAAGTAACTGAAAAAGAAGATGAAGTATTTTACTTAACTCTCTGTGCAAAATGTGCTTCCGGTGCACATACGCAAGAGAAAAAGTCCGCCTGGCCTCCCACCCCCAAAACCCTCAAAATTCTCTGATTCAAGCATCAATCCAGGGCATAGACATAATTTTTTAGGAAACCAGTAGATCGGCTTTCTTGGAAGAATTGAAAATCTACTATATTCTAAATATTCTGAGAATTACCTTATAAGATCATTTTATATAGTAAGTATAAATCAAAGATTCTTCGTTGCAGAATTTACAGCAGCAGATATGATTGGAAGTCATCAAGTTTATACTTGAATGGTTTAAACTAAATATTTAATGGGATTTGAAAGAAAATAATGACCTAAGAGAATTTTTCAGATGAAATTTAGTTTTAAAATCCAATATACTTGTTTTGCGTTAGAAATTCCTCTTGTATCCTCAATTTCTCTTCGAAGAACCCACCAGTATAAATTGCT
# Right flank :  TCTAAATGAGTAATAATTTTTTTGGCGATGTCCCGAACTAGCATAATCCCCAAATTGCCCAAGCATATCCTCCAGAACGCAGTTGCGATCTAGTAACGTTAGATATTGTGTTTGTTGTAGCGTTATAGTAATTAGCTGACAGTCGGTGAAAATTTGGTCATTCAAGTTTTTTCGAAAGAGAAATTCCTCCCCGACTCTAAATCTTTCATTTATAAATCTTTCGAAATTGTAAATAATTCTATTTGTCCATAGATAATATTACAAAGGATTGAAATCACTTTCGATAAACTATTAAATATTGGATCATAGACCATAAAATTTTCAGACCAAATATTACTCATATAACCATCAATATTACCGTAAACTTCTTTTGATTTGTATTCAGTTTCGATCATAAATGTTAGGCAGATGCCTTTTAGTTTTTCATTGGCGATGTCTGTAAGACAAACCATAATAGTAAATCCAAAATAATTTGCTCAACAAACCCACCCTTGATAATT

# Questionable array : NO	 Score: 3.20
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTGAAACTAACTTTGATGCCGAAAGGCGTTGAGCAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-7.80,-4.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0   Confidence: HIGH] 

# Array family : NA
//