Array 1 9154-7203 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLKQ01000031.1 Streptococcus canis strain FU97 ScFU97_contig31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 9153 36 100.0 30 .................................... AAACCTATGTACTTTGATTATAGATACATA 9087 36 100.0 30 .................................... TATTTCAGACTGTTAAGAGTTGCAACGAAG 9021 36 100.0 30 .................................... TGACGTTTATTCATTTCAAAACCAAATTGA 8955 36 100.0 30 .................................... TTATATAATATAATTCTGATATAATATCTC 8889 36 100.0 30 .................................... TTCAAATTATTTTCAAGCATTTTTCAATAA 8823 36 100.0 30 .................................... TGGAATCAGTTGCCCATTTTCATCAAGAAC 8757 36 100.0 30 .................................... TACAATCTGCTGTACAGATTATACAGTCTT 8691 36 100.0 30 .................................... TTTGTTTTCCAACATATGTACCGCCATTAT 8625 36 100.0 30 .................................... TGGTGATTCAATTGTAAAATCGCTATTCAC 8559 36 100.0 31 .................................... TTGTAGGACTAACAGGAACCCCAGCGCCTAA 8492 36 100.0 30 .................................... CGTTTAAACCATCACCTATCAAGCGTCTCA 8426 36 100.0 30 .................................... TTAATAACGCTATTGCTGATATTCGTGGAA 8360 36 100.0 30 .................................... TTTACTTGCTAATGATTTAAATTCTCCTAA 8294 36 100.0 30 .................................... AATCAATTAAAGATAACAATAAACTTAACG 8228 36 100.0 30 .................................... CTCTTCCTTTTTTGTTTGGTTCAGGCATAC 8162 36 100.0 30 .................................... TTAGTGTTTGAGTATCTACGGATGACCAAT 8096 36 100.0 30 .................................... TTTGTTTTCCAACATATGTACCGCCATTAT 8030 36 100.0 30 .................................... TGGTGATTCAATTGTAAAATCGCTATTCAC 7964 36 100.0 30 .................................... GATTTTGAGAGTACAGTAGAAGCTCTGTTT 7898 36 100.0 30 .................................... AGTCTAATGTAATTGCCGTCTTAATGACAG 7832 36 100.0 30 .................................... AAGGTTTCTGATGTTGAGGTGCAGGAGGTG 7766 36 100.0 30 .................................... CTATTTGGTAAATATGATTTGAATGCTTTT 7700 36 100.0 30 .................................... ACGGGAGACCACTGCAATACTTTTTCACTT 7634 36 100.0 30 .................................... CTATCTCCTCTTATGCCAATCGCATAATCA 7568 36 100.0 30 .................................... TAACCTTTTTTCTTGTTGCTCAATTACTTC 7502 36 100.0 30 .................................... CTGAGCCTATTGATGTCGTCACAGTTAAAT 7436 36 100.0 30 .................................... CAATGTTCGTGTGGGAAAATTGTTGAAATT 7370 36 100.0 30 .................................... AACCAAAAAGTTATTACTAACAACCAAAAA 7304 36 100.0 30 .................................... TTTTTAACCGCTGCATCAATTAAACGATCA 7238 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 30 36 100.0 30 GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : CACAGCCTGACGACGTCCACAGCGAGCCTTGTTCACCTTATAGTAATGATAGCACTCAGTTGGCTGAATGCCCTTGTTTGAGGAAAGTCACTACCTTATGAATGGTTTGACGGCTTCGCTTAAGTGATTGCGCAATTTCGAGGACAGAAGTATCTTTCTCAACAGATGCCTCTATCATTACGAGCTCATTTGTGGTAAGATGGGCAGGGGTCATTTATGTTACTTCCTTTCAGACAAATGTGGTGTTTATCTGAGCCTAACATAGATGGCTTTTTCTGTCTAATTTAATTTTACAAATTGGGCACATAAAAAATTGTAAGGCGACAGAACAAAGGAGAAAAGAAGGTTTCATGCGTTTGTCGTGCTGGGATAAGAAGGGAAGTTGATTCTATAGGTTTTTTGGTGTATAATGGAGCTATGAAAAGGACTGTTTAAGACTAAAGTCTAGCTAAGACAAATAGTGCGATTACGAAAAATTGTGGACGAAAATAGTCTACGAG # Right flank : TTGACAAAATCACGGTTACCAATATGTTCGCCAAATTTCAAGTTCAAGTTAGCCAGTCTGTAAAAACTCTTTAGGAGATTTGTAATCAAGTGGTTTCTTTGGGTAGTTATTAATCCCATTTTCAATAAATGCGACTTGTTGTTGAGTCGCATTTTTACTTCCCTTTGGTAACCAACTCCGAATGAGTCTGTTGTGATTTTCATTAGTTCCTCTCTCCCAAGAAGAATAGGGGTGAGCGTAATAAATATATTCCGAGTCAAAACCTTCTGCTAAGCGACTGAATTCAGTGCCATTATCAGCTGTGATTGAGCGAATCGGATAATCTTTTAGAATCCCTTCCAAAGCCTTGTTTACCAAATTAGCCGACTTATCAGGAATAAGTCGAGTGATTTGGTAGCGACTTCTTCTGTCTGTCAGCGTCAGTAGACACTCGTTTTTTGCTCTCGTCTGAATAACCGTATCAATTTCAAAATCACCGCTATGCTCACGCTTATTAATGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 136696-135142 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLKQ01000012.1 Streptococcus canis strain FU97 ScFU97_contig12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 136695 36 100.0 30 .................................... TCGGCTGAAGATGCTACTAATAGGGTTGTG 136629 36 100.0 30 .................................... CTATCGTTACACGCTTTACAGCTTGCTTGC 136563 36 100.0 30 .................................... CTTAAAAACTGTTTCGAAGACAATGGCTCC 136497 36 100.0 30 .................................... AACTTGGTCGGTTTTTGCAATGGGTAATCA 136431 36 100.0 30 .................................... AGATACACTCTCTGACAAACTCCTTAATGA 136365 36 100.0 30 .................................... TTAACTTGACCTCTATCATATCTAAAATTA 136299 36 100.0 30 .................................... ATGGAACCCGAATATCACTCTGGGGACTAT 136233 36 100.0 30 .................................... TTTAAACTTGGATTTGAATTTTGAGACTCA 136167 36 100.0 30 .................................... CAAAAGAGTTGGATGGGAAACTAACTGTTA 136101 36 100.0 30 .................................... TATGAGCTAGATTTAGAAGAGTTAAATGCT 136035 36 100.0 30 .................................... AGATGGTGGGCATCAGCAATCAGCCACCGC 135969 36 100.0 30 .................................... AATCAAAACCTCGCTTAATTGGTAGTATTT 135903 36 100.0 30 .................................... GCACACAACAAATAAAAAAGCAAGAGTCGC 135837 36 100.0 30 .................................... ATGATATTACTAAAAAAATACCATAATCTT 135771 36 100.0 30 .................................... TGTTACCATTATCGAAATCCTCGTTTCCTA 135705 36 100.0 30 .................................... GTGTATCGCCTATTATTGCTCATGCAGATA 135639 36 100.0 30 .................................... TGGAATAAAGCAATAAAAGCTTCATCAGAT 135573 36 100.0 30 .................................... AGGTGATCAAGCAAGCTGATGACATTGGTG 135507 36 100.0 30 .................................... GATTTTGAGAGTACAGTAGAAGCTCTGTTT 135441 36 100.0 30 .................................... AGTCTAATGTAATTGCCGTCTTAATGACAG 135375 36 100.0 30 .................................... AAGGTTTCTGATGTTGAGGTGCAGGAGGTG 135309 36 100.0 30 .................................... GCTTTCTTTTATTTTTGTAAAAAGGCTTAC 135243 36 100.0 30 .................................... CTATTGCTTTGGCTGAGGGTCAGAAATGGT 135177 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 24 36 100.0 30 GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : TTAGCAGCCACAATAACGGAATTGATTGCTTATGAATGCTTAGAAAATGAGTTGGATTTAGAATACGATGAGATCACCATTTTGGAACTGATAAAAGCTCTGGGAGTCAAGGTTGAAACACAAAGTGATACTATCTTTGAAAAGTGTCTTGAAATTTTACAAGTTTTCAAATACCTTTCAAAAAAGAAACTTTTAATTTTTATTAATTGTGGTTCTTACCTTACAAAAGAAGAATTATTGAAGATAAGAGAATATATTGACTTGTCTCAGCAAAGGGTTCTTTTTATAGAACCAAGAAAGTTATACAATATTCCCCAATATATTTTAGATGAAGATTATTTTTTGATAAAAGAACATACAACTTAGACTACATTCGTAAATGTTGATTCTATAGGTTTTTTGGCGTATAATATAGCTATGAAAAGGACTGTTTAAGACTAAAGTCTAGCTAAGACAAATAGTGCGATTACGAAAAATTGTGGACGAAAATAGTCTACGAG # Right flank : AGATAATACCGCTTGTTGTTGATCTTCGCTTCTTTCTATTAAAATGTTTTCATGTTATAATAGTCAAAAGGAGAAAGAGAGTGGAGCGATGGAACAAACATTTTTTATGATTAAGCCTGATGGGGTGAAACGAGGGTTAGTTGGGGAGATTTTGCGACGTATTGAGCGGCGAGGGTTTACATTTGAACGCTTGGAGTTGCGGCAAGCTAGCTCGGAACTCTTGGTTAAGCATTATGAGGCCTTGGTTGCGAAGCCATTTTATCCTGAGTTGGAAGCTTACATGACCAGTGGCCCTGTTTTAATTGGGGTACTTTCTGGGAATCGGGTGGTTTCGTCTTGGCGAACCATGATGGGGGTAACTAATCCCAAAGATGCTCTTCCTGGCACTATTCGAGGTGATTTTGCTCAGGCTCCTGGTGATGATGGTGGCATTTTTAACGTGGTTCATGGGTCTGATTCTCTAGATTCTGCTAAGCGTGAGATTGCCCTTTGGTTTAACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //