Array 1 50128-49921 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBTF01000001.1 Acinetobacter sp. NBRC 110496, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 50127 28 100.0 32 ............................ TGAGGAGGCTTTAACCATGCAATTGCAATTTA 50067 28 100.0 32 ............................ TTTAAAAATGGCGATTACATGATCTATTTTTG 50007 28 100.0 32 ............................ ACTACAAATAGAACCATGACCAGCGGATATAT 49947 27 92.9 0 ........................-..T | ========== ====== ====== ====== ============================ ================================ ================== 4 28 98.2 32 GTTCATGACGGCATACGTCATTTAGAAA # Left flank : GTAAAGGCAATTTGTCTTTGTAGATTACTTATTTCAATCGTGTCGGCATCGACAATGGTAATTTTACCTACACCTGCACGTGCCAACAGCTCGGCACTGGTACAGCCGATTCCGCCTGCGCCGATAATCAACACATTGGCGAGTTTTAGTTTTTCTTGTGCTTCGATATCCCAACCATCTAATAAAATCTGACGACTATAGAGATGCATTTCCTCATTGCTTAGCTCAAATTCGTTTTCTAAATGGTCTGACACGTGGTTTGCTTCTTTATCATCAAGGGTATTGCTGATTTTAAGTCGATGTCTGCTTGGAGGAAAGTAATAAATTGGAACCAGCTCTGTTTTCTTTTGACAAAAAGCTATTTTTACCCCAATATTTTTCTTACTCTTTAACAGCTTAATAAAATCAATAAGTTACTATATCAGTTAGAAACTTTGGGTAATGATGCTTTTTTAAGTATAACTTGATGTTTTGGCTGATATTATTTTCATTATTTTATA # Right flank : TAATTTACTAATCGGAGATAAGATTTAAATTGAAAACCACGATGTATCAAAGCGTTTAAAGAAATAGGAAATCGAATTCTGGCAGTTTGTAATACTTGAAGAACCCATGTTTTTTCAGCTAAAAATTCAAATAAGATTTTATCATTACATATCCTCGGGCCAGTAAAGATATCTGTCTGATAAGCCTGTCCTATGCATAATGACTCCAACAATATATTTTTATCCAGGTCGACTAATGCCAAAGTTAAATTTTCCTCGAAGATACAATCCTGGCTAAGGAAAAGAAGATAGCAGTGAGAATATACACAGACCATACCTTCTAACACTTTACCCCCAACCATAACCCCTGTCTTTTTCCCCTTAACCAAGACTTCAGACAGAGGCAAACTCTTATCTGTCATATCTTGGATCAATGCTAAACCAATATAATCAGCTACATACATATTCAACCTTACCTAAATAAAATTATGACTGATTATATTTCCATCTATTACTTTTGC # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGACGGCATACGTCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.62%AT] # Reference repeat match prediction: R [matched GTTCATGACGGCATACGTCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.10,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 4093-2524 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBTF01000014.1 Acinetobacter sp. NBRC 110496, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================================================= ================== 4092 37 100.0 32 ..................................... CTAATTTAACAGCTAATGCCGCTTGAGACAGT 4023 37 100.0 34 ..................................... TTTGTAGCTCAACGCACCCAGAGCCAAGTTTCTC 3952 37 100.0 33 ..................................... GTTGTGGTGAGCGAACTTCGAACGATATGTACC 3882 37 100.0 32 ..................................... GCAATGTTTATACAATCTAATAACTGACTAAC 3813 37 100.0 33 ..................................... GTCTTTAATTCCGTGATACTTTTTACTACTTCC 3743 37 100.0 32 ..................................... AAACACATAGTAAAGAATTACCATTAGTTTGA 3674 37 97.3 34 ............A........................ TACAGCAGCATATGATGTTGCAGGGAATGACATG 3603 37 97.3 34 ............A........................ GGTTTGTCAGCTTGGATTGCTTTAGCCACTTGTA 3532 37 97.3 34 ............A........................ AATACTAAATTGTAAGTTTTATCGGCCTCTAACT 3461 37 100.0 34 ..................................... TGAATCTAAGTTAAAGTCCATAGCAGTTTCCTCA 3390 37 86.5 77 ..........................C..G.G..C.G CGTAAAAAAACGATGAATATCGTTTTAGCTGTGCAAGACGAGAGCTTTGCTCGAGTTAGACGATGATATAACGTGGT 3276 37 91.9 35 A...TT............................... GTATATTCATAAACCAAGGTTTAACCTCCTCATGC GT,T,A [3262,3266,3273] 3200 37 100.0 32 ..................................... GTATACATAATCTAGTTCAGGGATCATCACAT 3131 37 100.0 33 ..................................... GAATAAAATTTCGTGATAAGCTGTTTCACCATT 3061 37 100.0 35 ..................................... ACCATATCATCACGCAATGGGCCTTCGAATTTGAA 2989 37 100.0 34 ..................................... TTTATGATGATAAGCAAGAATTAACGGAGCTAAA 2918 37 100.0 36 ..................................... TTATAAATCCATTCATCACAAACTATAATCTCAAAT 2845 37 100.0 34 ..................................... TAAAGATATCTTTGCGATCAATCCCGAAGAAGTC 2774 37 100.0 34 ..................................... ATTATCAAAGTTTTGTACTACTGGTTTTGATATA 2703 37 100.0 35 ..................................... CGGTGGAATACCTATCCGTTAAAATCGATGGATAT 2631 37 94.6 34 .............A..T.................... CAAGAATATTGCTTAGATGAAATTTGCAGCATCG 2560 37 83.8 0 .............A............C..G.G..C.G | ========== ====== ====== ====== ===================================== ============================================================================= ================== 22 37 97.7 36 GTCTGAACAGACTTCCCTGTTGATAAGGGATTAAGAC # Left flank : TGAACTATTCTTTTCGCCTGCCCAAAGAACACTGTATGTTTATGGTTTGGATATATTTTGATGAGAAGGATTCGTTTATTCTCTTGTACTGTTAAATCTTCTAACTGCCCCATAAGCTGTTGTTTTTGATCATGACTCAACCAACATTCAAATACTGATTTTTGTTGATGGATACCAAAAGCCAATAATGTTCTAAAAACTTTTGAACGGATTTTATCGCAACTGATATCGTACATTCCTAAATAATGGTGCATGATGTCTACTCATCGACCTTAATAAAAATAAAGTTAACCCCGTAATGGAAAACAATGATCAAAATGCAAGCTTATGATGTAAAACTCACCCACTCAATTTTGCTTTCTAGGCTTGAAAATAGAGTCTTAAACATATATCAAAAAAAATGTGAAATATTTACAAATACATCAACTTTACTGATACATAATTTGAAATATTTAACCCCTGTAAGCTTTTGCTTTACAACAAGAAAAATAAGCGCTAGA # Right flank : CGTAAAAAACGATGAATATCGTTTTAGCTGTGCAAGACGAGAGCTTTGCTCAAGCTAGACAATGATATAACGTGGTATCATTTACATGATGCTTCCCTGTTGATAAGGGATTAATTTTGCAAGCTTGTATTACACGATGGGCAGAAAAAATTCACGTTAAATAAACCAATCTTTTTAGAAATAGATTGGTCTTATGCCTTATCGTCATTGTGATACCTTTATAGAACAAGCCTTAAATCAAATTACTGATACATCAGATTTTATGCAATTCTATAACGAAAATTTAACACTCTTTCGACATCACGTGCATGACAACTATTTAGTCCTTGCTGAGCGTCTAAAAAAAGGAACAGGCATTATCCAGTCTTCTAGCGACATATTAAGCTATATGGTCTTGTATGGAGGATTCTTATATCAATGCTTTGACCAAATAACACAACAATTATTCAATGAATACCATCCTTTAAAAAAAGATGCTTCTCCAATTCATATTGTCGATT # Questionable array : NO Score: 3.00 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.14, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAACAGACTTCCCTGTTGATAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.50,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 57-264 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBTF01000141.1 Acinetobacter sp. NBRC 110496, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 57 28 100.0 32 ............................ AATTAAAAAACTCCGATATATGGAACGCCTAT 117 28 100.0 32 ............................ TTTCAAATGATTCATGCATAACAAGCTCCTTT 177 28 100.0 32 ............................ TTGTGACTGAAGTTAAAGCAGTTGCAGAGCAA 237 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 4 28 100.0 32 GTTCACTGCCGCATAGGCAGCTTAGAAG # Left flank : GGATCCTATGAAATTTGTCGTGTACAGAGTAAATTAAATTAATACGAGCATTAATGG # Right flank : GTATTATTTTCAGTTATACTTATGGAAGCGAGATATTCTGTAAGTAATTCTTGTAATAAAAAGCCAATTATCTCGGAAGATAATTGGCTTGAGCAAAGAGTTTGGCTATCCGATTATTCGTCGATCATCCCAATAACACGGTACTACAATCAAATTATTTTCATGTAATCGTGACCATAATCGGACACCTAAATCCCGCTGCATATTTTGGACTGTAAAATTGGAAATCAGCAGGGTAGATTTCATATTGTCATAACGGCTATATAAGACCTTATGCACCATCTCTAGGCGTTTTTCGTGTCGGTCATGCAGGCCATATTCATCAATCACTAATAAATCAAAACTGGAGAAATGGTCGATGACTTCTTTCTCAGAGCGTGAAGTGTCTGACCAGGTATCCATCATTTTTTGAGCAATTTCTGCACTGGTATAGTAGCGTGCAGATTTTGTACTGTTATGCAGAATGTTGCGAATAATTGATGCGCTCAGATGGGTTTTAC # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [65.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //