Array 1 1653874-1658785 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011786.1 Bifidobacterium actinocoloniiforme DSM 22766 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1653874 29 100.0 32 ............................. AGAACATGCGCGTGATGCGCTGGGGCGACAAC 1653935 29 100.0 32 ............................. CCGGCGACACGCTCAGCGGAATCGCCGCAAAA 1653996 29 100.0 32 ............................. CGACACACGTAACGCCAATTTGTCAAACACAT 1654057 29 100.0 32 ............................. GTGAGATTGCTAGCATCTCGATAAGTCGCTGA 1654118 29 100.0 32 ............................. GGCTCCTTCGCGTACTCAATCTTGACGGCCGG 1654179 29 100.0 32 ............................. GCTTTGGCCGTCCTCTTCAACGAAGAGTACGC 1654240 29 100.0 32 ............................. GCTTTGGCTGTCCTTTTTAATGAAGAATACGC 1654301 29 96.6 32 ............................T TGAGCCACTGGGATTGGGATTGGCGAATGCTG 1654362 29 100.0 32 ............................. TACAAGGACCCCATCACACTTGGCATGATGCA 1654423 29 100.0 32 ............................. GAAGAATATGCAAAGGCTGACCAGCGAATTAT 1654484 29 100.0 32 ............................. TGTCTAAGATTGTAGTCAGTCACTTGCTGCTG 1654545 29 100.0 32 ............................. GCCATCCGCAATCAAGCGTCGACTGACTTCCA 1654606 29 100.0 32 ............................. ATTACCACCCGCCAGGGCGCCCCCGGCGGAAG 1654667 29 100.0 32 ............................. CCAGACCTTGCGCCACAGTGCGCAACTGCTTA 1654728 29 96.6 32 ............................T CAGTCATTATCATCCTCCTTGCCAGGGTCGGG 1654789 29 100.0 32 ............................. TGATACTTTTGGGCACATCCATACACCCATAA 1654850 29 100.0 32 ............................. GTCACTTTCGACGTGATGGCTGATCCGTATCA 1654911 29 100.0 32 ............................. CCCAATCTTATACGCGTGGGCGAGGTACTCAC 1654972 29 100.0 32 ............................. TGATTATGCTGATAATATCCCGCTAGCAAACA 1655033 29 100.0 32 ............................. GAACTCCTTCTTGCACCACAAGGAGGCGATTT 1655094 29 100.0 32 ............................. TACGGCGTCGGCGGTTCCGGGTTCAGCGTGGG 1655155 29 100.0 32 ............................. CAGCCCTTGATGGTGGTGAGGCTGGAACTGAG 1655216 29 100.0 33 ............................. TGACCCGGATGCCGCTGTGGTCCGACCTCAATG 1655278 29 100.0 32 ............................. TTGGCAACATTTGGCAGACATGAACAACATCA 1655339 29 100.0 32 ............................. CTCACGCCGGCCGAAGCGGACCGGATCATTGA 1655400 29 100.0 32 ............................. CAACCCCAGTCCATGTCCGTGCCCTTGGTCGC 1655461 29 100.0 32 ............................. TCCGACGGTGTGCAGGCGGTGGGCGGGTTCGC 1655522 29 100.0 32 ............................. GGCCCCGGCATATACGCGCTCTTCTACCACGG 1655583 29 100.0 32 ............................. AGAAAACATCCCCTTCCCCCTAACAGCTCAAT 1655644 29 100.0 32 ............................. CCCTCAAGACCGTCGCCCCTCCTCAGACAGAG 1655705 29 100.0 32 ............................. CAGGGTCGCCATCCACCGTAACTACAGATTCG 1655766 29 96.6 32 ............................T AGACAAAGACCCGCAGACAAAAGAAAACCCCA 1655827 29 100.0 32 ............................. ATGATTCGGCAAAGGGGGGAGGGCCTGCCTGT 1655888 29 100.0 32 ............................. AAGCGAATTGGGCACCCATTTAGCTAGTGTCC 1655949 29 100.0 32 ............................. TTGTGTCTCAGATTATGGAGACCCCCCGTACA 1656010 29 100.0 32 ............................. GTTGGTACTTTGCGTAAGTATGGTCTTACGAT 1656071 29 100.0 32 ............................. ACCAACGACTTAACCGGGTAGGCCAAGGAATC 1656132 29 100.0 32 ............................. CTGACCGCCACATGGTCATACGAAGGAGGCCA 1656193 29 100.0 32 ............................. GCCGGTGGATACGGGTCATCAAACGGGAAGTG 1656254 29 100.0 32 ............................. GTCGACACATACAATAATCTACACAAAGATTA 1656315 29 100.0 32 ............................. ACCGGCATAGGTGATGGTACCATACAGCAGAG 1656376 29 100.0 32 ............................. GGTAAGATTAATAATTATCTTAATCCAACAAA 1656437 29 100.0 32 ............................. CTTAAAAAATTATCCCCTGAACTGAACGACAG 1656498 29 100.0 32 ............................. CGTCAAGCTGACGGGTGGGCACTCCACGACAG 1656559 29 100.0 32 ............................. TAGCGCCGGAGGCTTTGGCTGTCTGAGCATCG 1656620 29 100.0 32 ............................. CCTGACCCGTCGGTCTGCGAGTCGTCAAGGCC 1656681 29 100.0 32 ............................. CGGCGAGGTGGATAGTTTCGACGCCAAGCGAT 1656742 29 100.0 32 ............................. TTCAGCGAATCGCGCAATTCGACTAGCTTATT 1656803 29 96.6 33 ............................A CGCCGTGTTCCCATTCCTCAAACTGGAGGCATT 1656865 29 100.0 32 ............................. TTACGTTCACTGTCCCGGACCCGCTTGAGCCA 1656926 29 100.0 32 ............................. GAGTTGCGACTCAACGAGGGGTTTGAACAGAC 1656987 29 100.0 32 ............................. ATCACTTTCACATTGAAGGAAATGATTGACTC 1657048 29 100.0 32 ............................. GTGAACCTGACCGTGACCAGCCGGTCCGTGGC 1657109 29 100.0 32 ............................. CGAAAAGCCCCTTTTGAAGCTCCGCTTGTTTG 1657170 29 96.6 32 ................T............ GGCGTGACATCGGGCATGGTGTCGGGCATGAT 1657231 29 100.0 32 ............................. GCAATCAAGGATTCGGCTGGCCCGGTGCTGGA 1657292 29 100.0 32 ............................. GCAGACAGCCAGTCACCGGCCTGTTTGACAAC 1657353 29 100.0 32 ............................. CCCGGTAGCGTGGCGTGGCCATGACGGTCACC 1657414 29 100.0 32 ............................. GCCGACCAGGCATGGCATGCAGGCACCATGAC 1657475 29 96.6 32 ..A.......................... CCGAAAGTCATCCTGCAACCGTCCATTAACGA 1657536 29 100.0 32 ............................. TTCTCAAGATGGATGCTGGGCGTCATGTCCGG 1657597 29 96.6 32 ...C......................... AACGTGAAGGGCATTTCCGACGCGGCCAAACA 1657658 29 100.0 32 ............................. CGCCACCAGCGCACAACGCCACGACGGCAATA 1657719 29 100.0 32 ............................. TGTTCGGCCAGCTCACCTCGCTGCGCCCCTTC 1657780 29 100.0 32 ............................. TATATATAGAAGCTACATCTAGTGGCGCTCAA 1657841 29 100.0 32 ............................. TGCGCCGTGAACCGGTCGCCGGCGGGACCACC 1657902 29 100.0 32 ............................. AGGTCGTTATCGCCCAGAAGGTCAGGATTCTT 1657963 29 100.0 32 ............................. CCGTTAGAACTCATGGTATTGCTCCTCGTATC 1658024 29 100.0 32 ............................. CAAGCTGGACGCCGCAAAAAAGGTAAGGAAAA 1658085 29 100.0 32 ............................. CGACGGCAAAGGGTCGGGCAGGTCTCCGTTCG 1658146 29 100.0 32 ............................. CAGCCACAATCCGGCCGTGATGCGTGCGCCGT 1658207 29 100.0 32 ............................. CCGTCCCGAACTATCTGCTGGACCGGGATTAC 1658268 29 100.0 32 ............................. GCCCGCGCACGCGAAGTCGGGGCCCTCCTAAA 1658329 29 100.0 32 ............................. TGCTGCGCGTCATCCAGGTTAGCCATGTTAGG 1658390 29 96.6 32 .........C................... GCCTGGTTGGTGTCCAACCGGTCCCGGTCCTG 1658451 29 96.6 32 .........C................... CAGTGAGCCCGTCGGGCGTCACGAACCGGCCG 1658512 29 100.0 32 ............................. GCCGCATAGGTCGCGTAGGCCGAACCGTAGAC 1658573 29 96.6 32 ......................C...... TACCCCCTACCCCTCAGAATCGTTGGAATTCC 1658634 29 96.6 32 ................T............ AAATTGGAGGAACAAATGGCTGATGTGACCAA 1658695 29 96.6 32 ............................G ACTTTCCGCCTCCTCGTGCACCTCGTCCCAGC 1658756 29 93.1 0 ...........................AT | C [1658781] ========== ====== ====== ====== ============================= ================================= ================== 81 29 99.4 32 GTGTTCCCCGCATGCGCGGGGATGATCCC # Left flank : TATGGGAATGAATGAGCGCGTAAGGATTGGGCTCTGATGGTCGTTATCGTTTTGACGGCATGTCCGGTCGGGCTCCGAGGCGATTTGACTCGCTGGCTTTTCGAGATTTCGCCAGGGGTGTTTGTGGGGCATGTTTCCGCCCGTGTGCGAGACCGGTTGTGGGAAAGAGCGCTGGGCCTGGTAAAGAGCGGAAGGGCCATTATGGTCTATTCTGCCCGTAATGAGCAGCATCTTGCTTTCAAAGTTCATCGGGCCGATTGGCTACCGGAGGACCACGATGGGGTCGAGCTGGTCAAGCGCCCATTCGGCAGTGAAAAGGCATCAGTCTCCGGCAGTCAACAGCACGGTTGGAGCAAGGCAAGCAAATACCGGAAAGCGCGCCGCTTCAGCTACCATTGACCGTCATCCTCAGTTTTTCCCCGCCTCACCTCCACTGAACAAGTAAATGTAAAAGCCATCTTCTGCGATAGCTATTGCTGCAATACTAACGATTCTCAAGT # Right flank : TTCCTGGATGACTCAAAGCGAATATGTAGGGTCTACCGGAGGAGTTGCTCCGCGTACGGCTGGATGACCTCATATTCCGGGTCCTTCGCCAGATTCTCGACCCCCTGCGGGAACCTGGCGTACAGCTCGGGATGATCGACGGCGATATCAAGGGCGTCGGCGATGGCCAGGTCGGGCTCGCCGGCGAAAATGGCTTCTCTTGCAAGTTCCTCGCAATCTTCGTCTAACCCGGCTACCACCTTGAGGGACTGCTCAGCCAGATCCGTGAGCTGGTCAAACGTATAGTTCACTTCCCGCCTCCCTGTCTCCGAAGCTCGTCACGGTTGACTCCCGTGGGGGATTCTACCGTTTTTCGCGTTTCTGATTACGCCTGTGCCTTCGGGCGGGTATGTTCGGTCAATGTAGTATTCCCGCCTGCATGGGGATGATTCTTTGATTCGACAGTTGCGGTACACAGACGTTTCGTGCCCTCCCCCTCCCTGTGCGTTCGGGGATGATCC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCATGCGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCATGCGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //