Array 1 127335-117802 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFMPN010000006.1 Desulfovibrio sp. Huiquan2017 Scaffold6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 127334 32 100.0 35 ................................ CTTGGCGAAGGATTTTCCTTCGGCCAGGAATTGGC 127267 32 100.0 36 ................................ TTGTTCACAGGTCCCTCCTATTTTTTGAAAATCCAG 127199 32 100.0 35 ................................ CCCGAGCGGCTGATCAAGGAGAACAAGGGCCGGGG 127132 32 100.0 34 ................................ CCCTGGGGAGTGCGGCCGCGAACCCGGAGCGGTA 127066 32 100.0 34 ................................ GCGCACTCGACCTGCCCCTTGGCGCGGGGGTTGC 127000 32 100.0 35 ................................ ATACGCCTGGGGCGGCACTGTATATGCGTCGGGGG 126933 32 100.0 36 ................................ AACGGCATCCCCTTTGGCCAATGCAGCAGCGCCGAA 126865 32 100.0 34 ................................ ATCGACACGATTAATCAGGAGGCCGCGTAGCCAT 126799 32 100.0 33 ................................ ATTTTGTCGGCTATCCGTGCGCGTGCGTCATAA 126734 32 100.0 35 ................................ TGGCGGTGGACCCGGAGTTGGCGGCGCTGCACTCG 126667 32 100.0 34 ................................ TCGGCGGCCTTGTCGAGCATGGCCACGCCCAGGT 126601 32 100.0 34 ................................ CTGTAAAGGTCAATGGCCTTCTGATCTCTGTCCT 126535 32 100.0 34 ................................ CAGTGGTCCTCTGTGTAAGAGTCACGACCATAAG 126469 32 100.0 35 ................................ CACGCCCCTGAGCCAGCGGTACACGGTGGCCATGG 126402 32 100.0 35 ................................ CGCATCGCCCGGGCAAACAGGCAGGTCCACGTAGA 126335 32 100.0 38 ................................ ATCAGGGTCGAGTACGGCAGGTTGGTCAGCGCCGCGAC 126265 32 100.0 34 ................................ AATGAGAGTCCCCATCACTACAACGCCCATGAGT 126199 32 100.0 34 ................................ ACCTATAATGCGCAGGGCGCGACCGCTACGACCG 126133 32 100.0 34 ................................ ATGATGTTTTTCGCCATGTCGTCGGCTACGTCCT 126067 32 100.0 34 ................................ AATCCATCGCTGGGCACCGGATGGGGTCGGCCGC 126001 32 100.0 34 ................................ GTTCGCTGTCCCGATTGCGGCGGCTATCACGAGA 125935 32 100.0 33 ................................ ATGAAATGTTTGAGATGCTCCCGGCGCTTAGCG 125870 32 100.0 34 ................................ GTTCGCTGTCCCGATTGCGGCGGCTATCACGCGA 125804 32 96.9 34 ..........C..................... GTTCGCTGTCCCGATTGCGGCGGCTATCACGAGA 125738 32 96.9 35 .....................G.......... GCGGCGATGAGCGCGGCCAGTTCCGCGTCCGGCCG 125671 32 100.0 34 ................................ CCCCTGGCGCACGTTTGCCGACATTGTGCAGTCT 125605 32 100.0 35 ................................ AACTATTCGCTCCAAACCCGGGAGGACGCGCCCAA 125538 32 100.0 35 ................................ TATAATCAGTACGCTGTCAACACGTTGCCATCGTA 125471 32 100.0 35 ................................ TCGCGCATGAACTGCATCCAGCCCTTGTTCACGTC 125404 32 100.0 35 ................................ CGCCTCGGGCAGCGCCTTGAGGGCGCGGTAGTCCT 125337 32 100.0 34 ................................ CAGCCGCCGCCGTAGGACTCGGGCATCATGGACA 125271 32 100.0 34 ................................ AAGGCCATCAAGGGCGCGGACAAGTGGATGGAGA 125205 32 100.0 34 ................................ CAGCCGCCGCCGTAGGACTCGGGCATCATGGACA 125139 32 100.0 34 ................................ AAGGCCATCAAGGGCGCGGACAAGTGGATGGAGA 125073 32 100.0 34 ................................ CAGCCGCCGCCGTAGGACTCGGGCATCATGGACA 125007 32 100.0 34 ................................ AAGGCCATCAAGGGCGCGGACAAGTGGATGGAGA 124941 32 100.0 34 ................................ CAGCCGCCGCCGTAGGACTCGGGCATCATGGACA 124875 32 100.0 34 ................................ AAGGCCATCAAGGGCGCGGACAAGTGGATGGAGA 124809 32 100.0 34 ................................ CAGCCGCCGCCGTAGGACTCGGGCATCATGGACA 124743 32 100.0 34 ................................ AAGGCCATCAAGGGCGCGGACAAGTGGATGGAGA 124677 32 100.0 34 ................................ CAGCCGCCGCCGTAGGACTCGGGCATCATGGACA 124611 32 100.0 34 ................................ AAGGCCATCAAGGGCGCGGACAAGTGGATGGAGA 124545 32 100.0 34 ................................ CAGCCGCCGCCGTAGGACTCGGGCATCATGGACA 124479 32 100.0 34 ................................ CCCCTCAACCGGAACCAGCTCAAGGATCGGGCAT 124413 32 100.0 34 ................................ CTTGAAGCCCGCGCAGTCGTAGGCATTGAGGACG 124347 32 100.0 34 ................................ CGAGTCTCTTACCGGAACCCCCTCACCAAACAGA 124281 32 100.0 35 ................................ TTCGGATTTGGCTGTGGAGCAATGGTACAAGACGC 124214 32 100.0 34 ................................ CAATCGAGTTGGCCGCAGTTGCGGGTTACTCGAT 124148 32 100.0 36 ................................ TATCGGTGCGCGTAAAAGTTGGTCGGGTTCCAGCGG 124080 32 100.0 35 ................................ ATCAAATTGCCATTTGTCAATGCCGACGATTCCAC 124013 32 100.0 35 ................................ CAGCACTTCGGCGGTTGGTCGCCTTAAACGCCTCA 123946 32 100.0 35 ................................ TATTGTGGGCAAGGATAACTCATTTTCACCAATAA 123879 32 100.0 33 ................................ CTGGACAGCCGCCTGGATGGCCTTGACCCGTTC 123814 32 100.0 34 ................................ CGACGCCCCCTCCCCCGTGGAGGGAAAGGAGTGC 123748 32 100.0 35 ................................ TGGACGTAGATGGACAGGTTCGACAGGGCGGTGAC 123681 32 100.0 34 ................................ AGCCATGGGGTTTTCCGGAACATGACCCGCATAC 123615 32 100.0 35 ................................ AGGCGTAGCCTTGCGCTTTGTGGTGGTCGCTCTTG 123548 32 100.0 33 ................................ GGGCGGGTGTGGATTGGTGGCCCTGCGAGAATG 123483 32 100.0 33 ................................ CTCTGCCATAGGTATCCTCCTTTTTGTGTGATT 123418 32 100.0 34 ................................ CGGACTTGTGTTCAACATCAGGCAGAGCGCGTCC 123352 32 100.0 34 ................................ TTTTATGTGATGCAATACGTAGAATTGCCGAATG 123286 32 100.0 35 ................................ TTCGGACGGCGCGTCCGGCCGCCGACCAGCGGCTT 123219 32 100.0 34 ................................ CCCAGGACGTAGCCGAACACATGTCCAGGAACAT 123153 32 100.0 34 ................................ GGATACTTGCTTTTCCAAGCGCATGATCTTGATC 123087 32 100.0 37 ................................ AAGCAGCTTCCACCACCTAGCGACACCTTCAAGGCCG 123018 32 100.0 35 ................................ TGGTTCGTACGCCCGTGGTTGCCGTATGCCGTGAC 122951 32 100.0 35 ................................ TATGCAGATATTTCGTATAATCCCCACTTATCAAC 122884 32 100.0 34 ................................ CATTGATACCCCCCCTGGCTATTGCATGGCCGCG 122818 32 100.0 35 ................................ TGCCAGTATGTTATCCAGGACTTGCATGGTGGGAT 122751 32 100.0 34 ................................ CGGCAATATTACCCAAACTAATGGGAGTTATACG 122685 32 100.0 34 ................................ AAGTATGGCCCGAACACCGTTAAAATCCCGGTCA 122619 32 100.0 35 ................................ CCCTCCCGGACAGGCGGCGTCCGGGCGGCCCCCAG 122552 32 100.0 34 ................................ GGCGCATGTCGGACTGGGTGCGCGAGGTGGCCGT 122486 32 100.0 33 ................................ TTTTTTAGCGGTATTGACGGTAGGCAAGGAGAA 122421 32 100.0 34 ................................ GAGTGCTGCGAGGTTGGTAACGGCCTGCGGGTCG 122355 32 100.0 34 ................................ TTGACCAGGGCCGCACCGACCAGGGCGTGCTTGA 122289 32 100.0 34 ................................ TCCATGATCAGCACGCGCGGGCGCACCTCGGGTA 122223 32 100.0 34 ................................ AATCCCGTCATGCAGGAAGCCGTGTCTTCGGCCC 122157 32 100.0 34 ................................ GTATTATGTCACAGACACCCCGTCAAGGCCGGAT 122091 32 100.0 35 ................................ CGTTAGAAACGCCCGCACCTCGGCATGGTGCAGCG 122024 32 100.0 34 ................................ ACGGCCGCGTCGGGGTTTCTCCCGGTGGCAATCC 121958 32 100.0 34 ................................ CGGATCGTGTCCAGACGTACACGGCTCTGGCCGT 121892 32 100.0 35 ................................ GGACATTGCGCAAGGTCATGGGCAGCTATTTCCAA 121825 32 100.0 35 ................................ CTCCCAAGCCTCGTTCCGCTCCTGCATCCGGGCCA 121758 32 100.0 34 ................................ CCGGAATCGGTGGAGTGGCCCATCGCCCCGGAAT 121692 32 100.0 37 ................................ CCGACTCGGGCATTTTCACGGACACCTCCACCACCAA 121623 32 100.0 35 ................................ AGGAGGTCGCCGAGCTTCTGCATCTGTCCGCCGCC 121556 32 100.0 35 ................................ TGATCCAGCTTGGCGAAGTCCCGATCGGTGCGAGG 121489 32 100.0 34 ................................ CCTCGGGATCAAGGGCGGCGAGGCAGTCTTCCAG 121423 32 100.0 36 ................................ CCCTCGTCCTGTTTGTCAACGGTCCAAAAGACTAGC 121355 32 100.0 36 ................................ GCGGCGATGAGCGCGGCCCGTTCCGCGTCCGGCCGC 121287 32 100.0 36 ................................ CCCTCGTCCTGTTTGTCAACGGTCCAACAGACTAGC 121219 32 96.9 36 ........................T....... GCGGCGATGAGCGCGGCCAGTTCCGCGTCCGGCCGC 121151 32 100.0 36 ................................ CTCTTTCGGGCCGTCCTCACTGCCGCGATAAGTGAT 121083 32 100.0 34 ................................ CGGCTCCGCCTTGAACTTGCACGCGAGCTGGGGC 121017 32 100.0 35 ................................ CATGTTTATGGCAATCCGGCTTTCCGGGTCTGGGT 120950 32 100.0 36 ................................ GAGGCCATCTCCCGTCGTCTGCTCTCCTCCACCAAA 120882 32 100.0 34 ................................ TCAAGAGAGCGGAGTCCCTGCAAGGGGAAGATTA 120816 32 100.0 35 ................................ AAGCAGGTCCAACCTAGCCTCCAGACTCATCTGCT 120749 32 100.0 34 ................................ GGCCTCATACCATGCCCGCAAATGCTTTATCACG 120683 32 100.0 34 ................................ GGCCTCATACCATGCCCGCAAATGCTTTATCACG 120617 32 93.8 34 C........................A...... GGCCTCATACCCTGCCCGCAAATGCTTTATCACG 120551 32 93.8 34 C........................A...... GGCCTCATACCCTGCCCGCAAATGCTTTATCACG 120485 32 93.8 34 C........................A...... GGCCTCATACCCTGCCCGCAAATGCTTTATCACG 120419 32 93.8 34 C........................G...... TCCGCACTCTGGGCATCCGCACCGATATTGAGGT 120353 32 100.0 36 ................................ GGGGAAGAGGCTGCGATCCAGGTTGAGAACTCCATG 120285 32 100.0 34 ................................ AAGGTGCCGAAGAATGATGCGGGAAACGCCGTCC 120219 32 100.0 35 ................................ GCCAGAATCTCTTCGGACGTGTCGAAGATGGACGG 120152 32 100.0 34 ................................ GGACTCCGGCAACACGGCGGCGATGTATGCGTCC 120086 32 100.0 34 ................................ CTGCACCAGAGGCTGTATCCGAGTCTCCCACCGG 120020 32 100.0 34 ................................ CTTAATCATGGGGCCGCCGCATATTAGGCAAATT 119954 32 100.0 34 ................................ CGGGTATGATGGATATGTTATTGTTCGGCGGGAT 119888 32 100.0 35 ................................ TGTCCCAGGCAAAGCACGCTTTCGGCCTCGGCAAC 119821 32 100.0 35 ................................ GGGCCCGGTCGCTGCATAGCGAGGTCCCCCCACTG 119754 32 100.0 34 ................................ TCGAGCATTGAGTATATGTGCTGCCCGTCTAATG 119688 32 100.0 36 ................................ TGGACCTGCAAGGTCTCGCTGTCCGCGCTCACCCGC 119620 32 100.0 35 ................................ ATCCCGCCCCGCATACAGGCCGCCCGGAACCGCTT 119553 32 100.0 34 ................................ CCGCTTGAGGGGGTCGCCTCCTGCGAGCTCGGCG 119487 32 100.0 36 ................................ GCGGGATGGCCGGTTGGTCAGATGCTGGATAATCAG 119419 32 100.0 34 ................................ CTGCAAAATAGGCTGTACCCGATGGCAGCTCCTA 119353 32 100.0 34 ................................ TCGTCAACGGCCTGGGAGATGTCGGCGGCAAGCC 119287 32 100.0 34 ................................ CAGTAGTCGACGTTCATACCGCTAGATCGGCTGT 119221 32 100.0 35 ................................ TGGCTGATGCGCCCCCGGGCGACGAGCCGGATGTC 119154 32 100.0 35 ................................ CGGGCAACCGGATGGGAGGCCCCGCCGGTCAGCGC 119087 32 100.0 35 ................................ TGGATCGAAAGGAGGGGAGGGGGTCCAGGTCTAAA 119020 32 100.0 34 ................................ CGTAGCTCGGGCAACAAAGACCGGAGCGGGAATT 118954 32 100.0 33 ................................ TGGAACATGACCCGCATACGATCGTCGCCCATG 118889 32 100.0 33 ................................ GGTTGCGCTGTCGTCATCACCCTGACCCAGATC 118824 32 100.0 33 ................................ AACTACTTGATCTCCCAAGGTCATACATACAAC 118759 32 100.0 34 ................................ GGACACTCAGGTGAACCGTTTTTTCCTTTGCCAT 118693 32 100.0 34 ................................ CTGGTAGACGTCCAGGTTGCTATCATGGATTGGT 118627 32 100.0 34 ................................ GCACCCGGCCGGGGGGGTGTGCGTGCTTTGGCTA 118561 32 100.0 33 ................................ GCCCCACTCGCCCCAGACGTTGGAGACCTGGTA 118496 32 100.0 35 ................................ ACCAACCTGAAGGCGACCTTCAACAAGCAGTTCGA 118429 32 100.0 34 ................................ CAACTGCATGAGCGTCTTGCCCAGGCCAAATGCG 118363 32 100.0 35 ................................ TACTCCAGCGGTAAGTTGGCAACCTGCATGACCGC 118296 32 100.0 34 ................................ TCCTCGGTCACAAACCGCTCGTTGAACTCGTCAT 118230 32 100.0 34 ................................ GATGCCCGCAAGGATATATCGTATTTTGATCAAG 118164 32 100.0 34 ................................ AGGGGCGGGCAGCAGTTGCAGGGCCGGAGTCCAG 118098 32 100.0 34 ................................ AGCACGAATACATCCCTATCTTTCGTGAGTCGGT 118032 32 100.0 35 ................................ GTCAAACACGTAGGGCGTCTCCGTCCAGTTTGCCG 117965 32 100.0 35 ................................ AAGTACATCAAGCGGGCATGCCCGAGCGTAGCCTG 117898 31 93.8 34 .....T............-............. TACGTGAGCAAACCGATCCGCGTAATCTCGATTA 117833 32 84.4 0 ..........................G.GGCT | ========== ====== ====== ====== ================================ ====================================== ================== 144 32 99.6 34 GTCGCCCCCCACCCGGGGGCGTGGATTGAAAC # Left flank : GCTATCCACCCTTTTTCTGGAAGTGAGCATGTTGGTACTGGTCAGTTACGATGTCGGTTTCGCGGAACCGGACGGCAAGCGGCGGCTGCGCCGGATTGCCAAGATCTGCGAGAATTTCGGGCAGCGAGTGCAGTACTCGGTGTTCGAGTGCGTGGTCGAGCCCGCTCAATGGGTTCAACTGCGTCACCGGTTGCTGGAGGCGTATGATGAGGAGCGGGATAGCCTGCGTTTTTATTTTCTGGGCAAGAATTGGCAGCGGCGGGTGGAACAACACGGTTCCGGCGCCGCCTACGACCCGGAAACGGACGTTCTGATTCTCTAGCGCGAACCCCTAGCGGTTGCGGAATCCCCGGGAGGTTCGCGCGGTTGCCAATAACCCGTTATCCCGGTTAATTGGGAACCATGTTCCCCTTTGGGCGCATGTCGGGCCGCCCCCATTGCTCCCGGTTCGCGGAATTCCCCTCGGCAACCCGCACCGGAAGGACGTTTGGCCCCCCACA # Right flank : ATCGGGCGGAGGAGGGCCGGGGTGTCCCCGGCTCTCGTTGTTTCAGGGCCGGGCGGGCCGTGGGATCAATATGCCTTCAGTTCGCTCTTGTGCAGCAAACGCAGGGTTCCGCCCGGTTTGTCGGGTCGGGCCAGGAGCACGGCCAGGCCGTGACGGCGGATAAGCTTGATGCGTTCCTGGAGCAGGACAGGGGTGTCGGCGGCCACTTCGGTGCCCGCCTGGTCCTGGATGTGGTGGGCGCCGCACAGTCGGGCGATCTCCCCGGCGGGCAGGGCCGATCCTTCGGGGCCCAGGTGGTGCCAGCCCCGATAGCGGCCATCTTCGCCGCCCATGCGCAGTCCCGCGCCCGCCAGGGCGCCGATCACTCCGTCGCCCGTGCCGCCGTGTTCGGACAGGTGCACGCCCAGTTCCCCCGCCAGTCCGTAGGCCAGCCCCTTGTTCAGCACCGTGCGCTTGGCATCGTTGCCGAAGCGGATGAGCCGTTTCCGGGCCTCGCCGGA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCACCCGGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.20,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [23.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //