Array 1 2299-4031 **** Predicted by CRISPRDetect 2.4 *** >NZ_FUWM01000019.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================================================================================================== ================== 2299 32 100.0 42 ................................ ATTTATGACTATCATCTATAATCTCAAACTTGCCGACATTAT 2373 32 100.0 43 ................................ TTAAGTGGTCATTTAGCTGGTTTATATTCCAGAGTTGCATTAT 2448 32 100.0 42 ................................ TGAAGACTATAGTTGCTAGAATTATTAAGTTTATTTAATTAT 2522 32 100.0 43 ................................ TTTTCATCATCGCTTTTCTCAGGGGCTTTTTCTACTTCATTAT 2597 32 100.0 41 ................................ TTTTAACTTTGCTTACCTCTATTGCTTCTGGTAATAATTAT 2670 32 100.0 41 ................................ TTCTTATATTTTTGGGAACTACAATATAACTTATGAATTAT 2743 32 100.0 42 ................................ TCCATCATAACCAACATAAGGGATATGTACTTTTTTAATTAC 2817 32 100.0 43 ................................ CCTTATATAAATATCATAATTTTCTGAAAATTTAAGCCATTAC 2892 32 100.0 42 ................................ ACAGGAACACTTTTAGTATCTGCTGTCTCAAGTATAGATTAC 2966 32 100.0 40 ................................ GCAATAACTAAATAAATATAAAATTTCAAAGGTACATTAC 3038 32 100.0 42 ................................ CCTTATTATCTCTTTCTACATCTTCCCATTTTAAATAATTAC 3112 32 100.0 43 ................................ TAACTTTATTAGATCCCCCTTCAAACCTTTTTATTTTTATTAC 3187 32 100.0 42 ................................ TTCAACTTCCGAAATGAATACATTAAATCTCCTATTTATTAC 3261 32 100.0 42 ................................ AGAAAAGAATTGATAATTATTAGGGATAAGTGGAATAATTAC 3335 32 100.0 42 ................................ TAAGGAGATTCTCCAAAAGCATCTTTATCAGTTGCTAATTAC 3409 32 100.0 42 ................................ TGAAGAATATCTAAAACAATGTAAGCCATACCTGTTAATTAC 3483 32 100.0 41 ................................ ATTTAAGACCTAAATCTTCCATTTTATTTTTAGAAAATTAC 3556 32 100.0 42 ................................ GCATATATGCGATTCCCGAATAGTTTTAATCAAAAAAATTAC 3630 32 100.0 43 ................................ GCTATGATCTGCCACTTCTTGAGTTTAGTTTCTCTTTTATTAC 3705 32 100.0 42 ................................ TCCTTAAATAGCTGCCACATGCCTCCAAAACAAATAAATTAC 3779 32 100.0 41 ................................ TCAATAACACCGTATACTTTCATTTGATCAGCCCCCATTAC 3852 32 100.0 116 ................................ AACAGTATTACAGCTAGACACCGGCGTAGGTGATGTATATTACAAAGACTACTCCGTTAAGTAGGCCATTTCCGGATATTCCTTCCCTGTATCTACACAGAGGTGATGTATATTAC 4000 32 84.4 0 .A...C...................T.AC... | ========== ====== ====== ====== ================================ ==================================================================================================================== ================== 23 32 99.3 45 AGAGATTACTCCGTTAAGTAGGAGACTGAAAG # Left flank : AATCCTAAATATGCTAGGAGATCATAAAATACTTACTGAAGATTTTGCTGAGCAGATAAAAGGGATGGGAGATTATAGAAATCGGTTAGTCTATATGTATAATGAGGTTACTGGTGATGAGCTATATAATCTACTTCAAAATAAGCTTTCTGACTTTAAAGAGTTTCGTAAGCAGATTAGTGAATATTTAGAAAATAATTAGTCAAGCATTATGTAATATGCAGGATAATTAGGTTTAATATAGAAATTATTAATTAATGGTTAAGTTCTATTTTCGAAACCCCTATAAAAGTAATGATATTATAATGGATTTTGATTTAAAAGTTTGCTTGTTAAAATAGCTATAATCCTTAAAATGATAAGGAGTGAGGTGGGTTTCGCAAACCCCAAGGGTTTTTGTGCAAGATTTAGTTTTCGAAAAATTGGAGGTGATTTCAAGAAGGCGAAGTGCTATAAACGTTGATATCATAGGATTTGTATTTTTAAATTTTCGCGATTAT # Right flank : GATTTATTTTTACTCACATTCTCACTGACACGAACACTTAATTACAAAAATTACTCCATTAGCTAGTCTTTTCAATTATTGAAGAGATTAGCTTTTTTCATGAAAAAAATATTTTTTCTTTTACGTTCCCAGACATATGGGAATATGGTATGTTATACTTCATGTAAATAAAAATTTTGGAGGTGAGTTTATGGGATCAGAATCACTTGTAGTCTCTGATTATGGAATCTTTATTGGTAAGAAGAGTCAACGAGTAGTTCTCAAAAAAGATAAAAAGATCATAGAAGAGATACCACTATTTAAATTAAAAGAAATTTTGGTTACTACTTCTGGAGTATCATTATCTTCAGATGTAATTCAAGAATGTGCTAAAGCAGGGGTGCAGATTGATTTTGTGACATATACTGGAGAACATTTAGCAAAAGTTTCTTCATCAGCAATGGGAGGTACAATTAAGACTCGTCGAGAGCAGATATTAGCATATGAAGATAAACGAGGAG # Questionable array : NO Score: 5.90 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.31, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGAGATTACTCCGTTAAGTAGGAGACTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.70,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 15458-16231 **** Predicted by CRISPRDetect 2.4 *** >NZ_FUWM01000019.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 15458 37 100.0 37 ..................................... ACTAAACTATCTAATCTTTTATATCCCTCATTAGTCA 15532 37 100.0 38 ..................................... ATTAATAAACCCAGGCTCTCCTGTCTTTTTAATACTCT 15607 37 100.0 38 ..................................... TCTTATTAACCTTAGCCACCAATTGCATCCCTCTTGCT 15682 37 100.0 36 ..................................... ATCTTTACTCTGCTTAACTATATCAAATCCATTATT 15755 37 100.0 35 ..................................... TTCTCAAATACTTTAATCCTCTTCTCTGCCCCATT 15827 37 100.0 38 ..................................... TCATTAAAAACCTATCTAATAACTCACTATCTGTCTCC 15902 37 100.0 35 ..................................... TCTGCCAACAAGATTGAACCATCATGTCTAATAGA 15974 37 100.0 37 ..................................... TATCATTGTAATGCTGAATAAAAGCCTTAGAACCTGA 16048 37 100.0 36 ..................................... ACTAAGCTGAGCATTTATCAATCACCTCTTGTACTT 16121 37 100.0 37 ..................................... TACTCCTGAAGGTTATCCAGACATCATAAAAGAAGCC 16195 37 97.3 0 ....................................A | ========== ====== ====== ====== ===================================== ====================================== ================== 11 37 99.8 37 ATTACAAAGACTACTCCGTTAAGTAGGAGACTGAAAG # Left flank : AACAAAGAATTAAGATGTATGGAGTAACAGGTGAGTTAGAATATGAAGGTGACTTAGGAGAGTTTTTACCTTACTTAATTCTAGGACAATATACACATGTAGGTAAGAATACAGTCTTTGGATTAGGTGATTTTAAGATTCTGAAGAATAATTAAAACTGTATTAGAAAATTTTAAATTAAAAGAGATTAGTTAGGATAATGAACAATTCAATATCATGTAATATGCAGGATAATTAGGTTTAATATAGAAATTATTATTTAGTAGCTAAGTCTTATTTTCGAAAACCCTATAAAAGTAATGATATAATAATAGATTTTGATTTAAAAGTTTGCTAGTTAAAATAGCTATAAACCCTGACACAATAAGGAGCGGGATGTATTTCGCAAACCTCTAGGGTTTTCGTGCAAGATTTAGTTTTCGAAAATTTGGAGGTGATTTCAAGAAGGAGAAGTGCTATAAAGCTTGATATCATGGGGTTCTTATTTTCAATTTTTCGCG # Right flank : ATAAATAAAATATATTTTTTTATTTCTAGTCTGTATTCCGTCTGTGTCTAAATATGATTTGATTTTTGTTTTTAACTGTCAACTGATAACTGTAAACTGTCAACTCAGATAGGGAAGGTATCCCTATCTTTTTCTATGCAAAAATTTAAGAGTTTAAATAGTGAATATTTTTTTCATTTAATATAATACTAAATTAATAAGCAAGGAGGGATTCTATGTTTAATAGGATATTTAAAATGCTTAATTATTTAAAATTAAAATCATCTAATCAAAAAGCTAAAAAAGGCAAAAAAAACATAGAGAAAATTCCTCGTTCAATCCAGGATATTAAAGAAAGATTAAAGGAATTGTTTGAAGATAGTAGTGACTTTGTTATGCGAGAAGTGGTATTAGGAAATGAATCTAATATTGAAGTTATTATTGCTCACATAGATGGTTTAACAGATAGAAAATCAGTTAATAATAATATTGTGAAACCATTAATTTTAGAATCACGAGAC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTACAAAGACTACTCCGTTAAGTAGGAGACTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.70,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //